RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 CAMSAP1Q5T5Y3 1602 aa38.14■■■■□ 3.7
CSPG5-205ENST00000610462 CFAP65Q6ZU64 1925 aaKnown RBP38.14■■■■□ 3.7
CSPG5-205ENST00000610462 TMC1Q8TDI8 760 aa38.13■■■■□ 3.7
CSPG5-205ENST00000610462 PARD3Q8TEW0 1356 aa38.12■■■■□ 3.69
CSPG5-205ENST00000610462 PNISRQ8TF01 805 aaKnown RBP38.11■■■■□ 3.69
CSPG5-205ENST00000610462 WASHC2CQ9Y4E1 1318 aa38.11■■■■□ 3.69
CSPG5-205ENST00000610462 NRXN1Q9ULB1 1477 aa38.09■■■■□ 3.69
CSPG5-205ENST00000610462 EIF3AQ14152 1382 aaKnown RBP38.08■■■■□ 3.69
CSPG5-205ENST00000610462 ADGRF5Q8IZF2 1346 aa38.07■■■■□ 3.69
CSPG5-205ENST00000610462 PANK3Q9H999 370 aa38.05■■■■□ 3.68
CSPG5-205ENST00000610462 BCANQ96GW7 911 aa38.05■■■■□ 3.68
CSPG5-205ENST00000610462 DIP2BQ9P265 1576 aa38.04■■■■□ 3.68
CSPG5-205ENST00000610462 PPLO60437 1756 aa38.04■■■■□ 3.68
CSPG5-205ENST00000610462 ZC3H13Q5T200 1668 aaKnown RBP38.04■■■■□ 3.68
CSPG5-205ENST00000610462 SIGLEC1Q9BZZ2 1709 aa38.02■■■■□ 3.68
CSPG5-205ENST00000610462 CDCA8Q53HL2 280 aa38.02■■■■□ 3.68
CSPG5-205ENST00000610462 CFAP70Q5T0N1 1121 aa38.02■■■■□ 3.68
CSPG5-205ENST00000610462 LRPPRCP42704 1394 aaKnown RBP38.01■■■■□ 3.68
CSPG5-205ENST00000610462 NOS1P29475 1434 aa38■■■■□ 3.67
CSPG5-205ENST00000610462 YEATS2Q9ULM3 1422 aa38■■■■□ 3.67
CSPG5-205ENST00000610462 NLRP13Q86W25 1043 aa37.99■■■■□ 3.67
CSPG5-205ENST00000610462 SYNMO15061 1565 aa37.98■■■■□ 3.67
CSPG5-205ENST00000610462 ZMYM4Q5VZL5 1548 aa37.97■■■■□ 3.67
CSPG5-205ENST00000610462 PIK3C2BO00750 1634 aa37.97■■■■□ 3.67
CSPG5-205ENST00000610462 CHGAP10645 457 aaKnown RBP37.96■■■■□ 3.67
CSPG5-205ENST00000610462 ARHGAP31Q2M1Z3 1444 aa37.95■■■■□ 3.67
CSPG5-205ENST00000610462 FAM69CQ0P6D2 419 aa37.95■■■■□ 3.67
CSPG5-205ENST00000610462 SETBP1Q9Y6X0 1596 aa37.95■■■■□ 3.67
CSPG5-205ENST00000610462 KDM5AP29375 1690 aaKnown RBP37.93■■■■□ 3.66
CSPG5-205ENST00000610462 RPGRIP1LQ68CZ1 1315 aa37.92■■■■□ 3.66
CSPG5-205ENST00000610462 MYO3AQ8NEV4 1616 aa37.92■■■■□ 3.66
CSPG5-205ENST00000610462 MYOM1P52179 1685 aa37.91■■■■□ 3.66
CSPG5-205ENST00000610462 SLC24A1O60721 1099 aa37.91■■■■□ 3.66
CSPG5-205ENST00000610462 CC2D1BQ5T0F9 858 aaKnown RBP37.89■■■■□ 3.66
CSPG5-205ENST00000610462 TSPOAP1O95153 1857 aa37.88■■■■□ 3.66
CSPG5-205ENST00000610462 PIK3C2GO75747 1445 aa37.88■■■■□ 3.65
CSPG5-205ENST00000610462 SMG6Q86US8 1419 aaKnown RBP37.87■■■■□ 3.65
CSPG5-205ENST00000610462 ERVK-7P63135 1459 aa37.82■■■■□ 3.64
CSPG5-205ENST00000610462 C14orf93Q9H972 538 aaKnown RBP37.81■■■■□ 3.64
CSPG5-205ENST00000610462 KNSTRNQ9Y448 316 aa37.8■■■■□ 3.64
CSPG5-205ENST00000610462 SBNO2Q9Y2G9 1366 aa37.79■■■■□ 3.64
CSPG5-205ENST00000610462 ERICH6BQ5W0A0 696 aa37.78■■■■□ 3.64
CSPG5-205ENST00000610462 ADGRB1O14514 1584 aa37.77■■■■□ 3.64
CSPG5-205ENST00000610462 PREX1Q8TCU6 1659 aa37.77■■■■□ 3.64
CSPG5-205ENST00000610462 NEXMIFQ5QGS0 1516 aa37.76■■■■□ 3.64
CSPG5-205ENST00000610462 NUDCQ9Y266 331 aa37.76■■■■□ 3.64
CSPG5-205ENST00000610462 REREQ9P2R6 1566 aa37.75■■■■□ 3.63
CSPG5-205ENST00000610462 ASXL1Q8IXJ9 1541 aa37.75■■■■□ 3.63
CSPG5-205ENST00000610462 IRX6P78412 446 aaPredicted RBP37.73■■■■□ 3.63
CSPG5-205ENST00000610462 INSRP06213 1382 aa37.72■■■■□ 3.63
CSPG5-205ENST00000610462 AMER1Q5JTC6 1135 aaPredicted RBP37.72■■■■□ 3.63
CSPG5-205ENST00000610462 SLC52A1Q9NWF4 448 aa37.7■■■■□ 3.63
CSPG5-205ENST00000610462 CENPJQ9HC77 1338 aaPredicted RBP37.7■■■■□ 3.63
CSPG5-205ENST00000610462 NPC1L1Q9UHC9 1359 aa37.7■■■■□ 3.63
CSPG5-205ENST00000610462 QRICH2Q9H0J4 1663 aa37.69■■■■□ 3.62
CSPG5-205ENST00000610462 VGFO15240 615 aaPredicted RBP37.68■■■■□ 3.62
CSPG5-205ENST00000610462 IDI1Q13907 227 aa37.68■■■■□ 3.62
CSPG5-205ENST00000610462 AGLP35573 1532 aa37.67■■■■□ 3.62
CSPG5-205ENST00000610462 MYO5BQ9ULV0 1848 aa37.66■■■■□ 3.62
CSPG5-205ENST00000610462 TRAK1Q9UPV9 953 aa37.64■■■■□ 3.62
CSPG5-205ENST00000610462 TMEM131LA2VDJ0 1609 aa37.63■■■■□ 3.61
CSPG5-205ENST00000610462 ZFYVE9O95405 1425 aa37.63■■■■□ 3.61
CSPG5-205ENST00000610462 BLMP54132 1417 aaPredicted RBP37.62■■■■□ 3.61
CSPG5-205ENST00000610462 KIF13AQ9H1H9 1805 aa37.61■■■■□ 3.61
CSPG5-205ENST00000610462 SENP3-EIF4A1A0A087X0R7 540 aa37.61■■■■□ 3.61
CSPG5-205ENST00000610462 PPP2R1AP30153 589 aa37.6■■■■□ 3.61
CSPG5-205ENST00000610462 TSHZ2Q9NRE2 1034 aa37.6■■■■□ 3.61
CSPG5-205ENST00000610462 TMEM132EQ6IEE7 984 aa37.59■■■■□ 3.61
CSPG5-205ENST00000610462 PPP6R1Q9UPN7 881 aa37.57■■■■□ 3.61
CSPG5-205ENST00000610462 ARHGEF28Q8N1W1 1705 aaKnown RBP37.56■■■■□ 3.6
CSPG5-205ENST00000610462 NUTM2DQ5VT03 806 aaPredicted RBP37.55■■■■□ 3.6
CSPG5-205ENST00000610462 PPP4R2Q9NY27 417 aa37.55■■■■□ 3.6
CSPG5-205ENST00000610462 RNF123Q5XPI4 1314 aa37.55■■■■□ 3.6
CSPG5-205ENST00000610462 CLTCQ00610 1675 aaKnown RBP37.52■■■■□ 3.6
CSPG5-205ENST00000610462 PDE3BQ13370 1112 aa37.51■■■■□ 3.59
CSPG5-205ENST00000610462 CARD14Q9BXL6 1004 aa37.49■■■■□ 3.59
CSPG5-205ENST00000610462 FBXO31Q5XUX0 539 aaPredicted RBP37.48■■■■□ 3.59
CSPG5-205ENST00000610462 ARHGEF40Q8TER5 1519 aa37.47■■■■□ 3.59
CSPG5-205ENST00000610462 ADAMTS8Q9UP79 889 aa37.41■■■■□ 3.58
CSPG5-205ENST00000610462 SALL2Q9Y467 1007 aaPredicted RBP37.41■■■■□ 3.58
CSPG5-205ENST00000610462 PUS7Q96PZ0 661 aaKnown RBP37.41■■■■□ 3.58
CSPG5-205ENST00000610462 SPATA31D1Q6ZQQ2 1576 aa37.4■■■■□ 3.58
CSPG5-205ENST00000610462 WDR43Q15061 677 aaKnown RBP eCLIP37.39■■■■□ 3.58
CSPG5-205ENST00000610462 TULP4Q9NRJ4 1543 aa37.38■■■■□ 3.57
CSPG5-205ENST00000610462 EVC2Q86UK5 1308 aa37.36■■■■□ 3.57
CSPG5-205ENST00000610462 USP32Q8NFA0 1604 aa37.34■■■■□ 3.57
CSPG5-205ENST00000610462 NSD3Q9BZ95 1437 aa37.34■■■■□ 3.57
CSPG5-205ENST00000610462 SLC12A5Q9H2X9 1139 aa37.33■■■■□ 3.57
CSPG5-205ENST00000610462 STAG3Q9UJ98 1225 aa37.29■■■■□ 3.56
CSPG5-205ENST00000610462 ALKQ9UM73 1620 aa37.29■■■■□ 3.56
CSPG5-205ENST00000610462 PTPRMP28827 1452 aa37.27■■■■□ 3.56
CSPG5-205ENST00000610462 MLECQ14165 292 aa37.27■■■■□ 3.56
CSPG5-205ENST00000610462 A2ML1A8K2U0 1454 aa37.26■■■■□ 3.56
CSPG5-205ENST00000610462 CDCA7LQ96GN5 454 aa37.26■■■■□ 3.56
CSPG5-205ENST00000610462 RCAN3Q9UKA8 241 aa37.25■■■■□ 3.55
CSPG5-205ENST00000610462 YTHDC2Q9H6S0 1430 aaKnown RBP37.25■■■■□ 3.55
CSPG5-205ENST00000610462 B4GALNT3Q6L9W6 998 aa37.24■■■■□ 3.55
CSPG5-205ENST00000610462 STK26Q9P289 416 aa37.24■■■■□ 3.55
CSPG5-205ENST00000610462 ANKRD36BQ8N2N9 1353 aa37.21■■■■□ 3.55
CSPG5-205ENST00000610462 RRP1P56182 461 aaKnown RBP37.2■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms