RNA–Protein interactions for RNA: ENST00000610404.4

TTR-204, Transcript of transthyretin, humanhuman

TSL 5 BASIC

Gene TTR, Length 1,040 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-204ENST00000610404 PREX2Q70Z35 1606 aa14.48□□□□□ -0.09
TTR-204ENST00000610404 ITSN2Q9NZM3 1697 aa14.48□□□□□ -0.09
TTR-204ENST00000610404 LTBP4Q8N2S1 1624 aa14.48□□□□□ -0.09
TTR-204ENST00000610404 KIDINS220Q9ULH0 1771 aa14.47□□□□□ -0.09
TTR-204ENST00000610404 NCOA1Q15788 1441 aa14.45□□□□□ -0.1
TTR-204ENST00000610404 SOCS7O14512 581 aa14.44□□□□□ -0.1
TTR-204ENST00000610404 VGFO15240 615 aaPredicted RBP14.44□□□□□ -0.1
TTR-204ENST00000610404 MARVELD3Q96A59 401 aa14.44□□□□□ -0.1
TTR-204ENST00000610404 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
TTR-204ENST00000610404 ESF1Q9H501 851 aaKnown RBP14.44□□□□□ -0.1
TTR-204ENST00000610404 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
TTR-204ENST00000610404 CASKIN1Q8WXD9 1431 aa14.43□□□□□ -0.1
TTR-204ENST00000610404 CNTLNQ9NXG0 1405 aa14.42□□□□□ -0.1
TTR-204ENST00000610404 CDC42BPAQ5VT25 1732 aa14.42□□□□□ -0.1
TTR-204ENST00000610404 CCDC18Q5T9S5 1454 aa14.42□□□□□ -0.1
TTR-204ENST00000610404 SAMD9LQ8IVG5 1584 aa14.42□□□□□ -0.1
TTR-204ENST00000610404 SOX12O15370 315 aa14.41□□□□□ -0.1
TTR-204ENST00000610404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.4□□□□□ -0.1
TTR-204ENST00000610404 ZFP91Q96JP5 570 aaPredicted RBP14.4□□□□□ -0.1
TTR-204ENST00000610404 CAMSAP1Q5T5Y3 1602 aa14.4□□□□□ -0.1
TTR-204ENST00000610404 IQSEC2Q5JU85 1478 aa14.39□□□□□ -0.11
TTR-204ENST00000610404 SYCP2Q9BX26 1530 aa14.39□□□□□ -0.11
TTR-204ENST00000610404 NPATQ14207 1427 aa14.39□□□□□ -0.11
TTR-204ENST00000610404 ZMYM3Q14202 1370 aa14.38□□□□□ -0.11
TTR-204ENST00000610404 EMP3P54852 163 aa14.38□□□□□ -0.11
TTR-204ENST00000610404 ZNF777Q9ULD5 760 aaPredicted RBP14.38□□□□□ -0.11
TTR-204ENST00000610404 MROH2AA6NES4 1674 aa14.38□□□□□ -0.11
TTR-204ENST00000610404 NCKAP5LQ9HCH0 1330 aa14.37□□□□□ -0.11
TTR-204ENST00000610404 GPATCH8Q9UKJ3 1502 aaKnown RBP14.36□□□□□ -0.11
TTR-204ENST00000610404 SUPT6HQ7KZ85 1726 aaKnown RBP14.36□□□□□ -0.11
TTR-204ENST00000610404 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
TTR-204ENST00000610404 TAOK2Q9UL54 1235 aa14.36□□□□□ -0.11
TTR-204ENST00000610404 SPAG9O60271 1321 aaKnown RBP14.36□□□□□ -0.11
TTR-204ENST00000610404 ZNF335Q9H4Z2 1342 aaPredicted RBP14.36□□□□□ -0.11
TTR-204ENST00000610404 FYCO1Q9BQS8 1478 aa14.35□□□□□ -0.11
TTR-204ENST00000610404 ATP7AQ04656 1500 aa14.35□□□□□ -0.11
TTR-204ENST00000610404 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
TTR-204ENST00000610404 INO80Q9ULG1 1556 aaPredicted RBP14.34□□□□□ -0.11
TTR-204ENST00000610404 MYO3AQ8NEV4 1616 aa14.33□□□□□ -0.11
TTR-204ENST00000610404 CLTCQ00610 1675 aaKnown RBP14.33□□□□□ -0.11
TTR-204ENST00000610404 ZNF142P52746 1687 aaPredicted RBP14.33□□□□□ -0.12
TTR-204ENST00000610404 PTPRKQ15262 1439 aa14.32□□□□□ -0.12
TTR-204ENST00000610404 A2MP01023 1474 aa14.32□□□□□ -0.12
TTR-204ENST00000610404 PLA2R1Q13018 1463 aa14.31□□□□□ -0.12
TTR-204ENST00000610404 CEP170BQ9Y4F5 1589 aaPredicted RBP14.31□□□□□ -0.12
TTR-204ENST00000610404 HOXB3P14651 431 aaPredicted RBP14.31□□□□□ -0.12
TTR-204ENST00000610404 KIAA1107Q9UPP5 1409 aa14.31□□□□□ -0.12
TTR-204ENST00000610404 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
TTR-204ENST00000610404 MICALL2Q8IY33 904 aa14.3□□□□□ -0.12
TTR-204ENST00000610404 UBAP1LF5GYI3 381 aa14.29□□□□□ -0.12
TTR-204ENST00000610404 PKD2Q13563 968 aa14.29□□□□□ -0.12
TTR-204ENST00000610404 GGT6Q6P531 493 aa14.29□□□□□ -0.12
TTR-204ENST00000610404 CFDP1Q9UEE9 299 aaPredicted RBP14.29□□□□□ -0.12
TTR-204ENST00000610404 PLEKHH2Q8IVE3 1493 aa14.29□□□□□ -0.12
TTR-204ENST00000610404 DOK7Q18PE1 504 aa14.28□□□□□ -0.12
TTR-204ENST00000610404 CCNB3Q8WWL7 1395 aa14.28□□□□□ -0.12
TTR-204ENST00000610404 MS4A4AQ96JQ5 239 aa14.28□□□□□ -0.12
TTR-204ENST00000610404 PHF8Q9UPP1 1060 aa14.28□□□□□ -0.12
TTR-204ENST00000610404 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
TTR-204ENST00000610404 FAM205CA6NFA0 338 aa14.26□□□□□ -0.13
TTR-204ENST00000610404 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
TTR-204ENST00000610404 ZNF644Q9H582 1327 aaPredicted RBP14.25□□□□□ -0.13
TTR-204ENST00000610404 A2ML1A8K2U0 1454 aa14.25□□□□□ -0.13
TTR-204ENST00000610404 SPNS2Q8IVW8 549 aa14.24□□□□□ -0.13
TTR-204ENST00000610404 BCL11BQ9C0K0 894 aaPredicted RBP14.24□□□□□ -0.13
TTR-204ENST00000610404 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
TTR-204ENST00000610404 ADGBQ8N7X0 1667 aa14.23□□□□□ -0.13
TTR-204ENST00000610404 DNMT1P26358 1616 aaKnown RBP14.23□□□□□ -0.13
TTR-204ENST00000610404 HOXB1P14653 301 aaPredicted RBP14.23□□□□□ -0.13
TTR-204ENST00000610404 NLRP6P59044 892 aa14.23□□□□□ -0.13
TTR-204ENST00000610404 MTUS2Q5JR59 1369 aa14.22□□□□□ -0.13
TTR-204ENST00000610404 TIAM1Q13009 1591 aa14.22□□□□□ -0.13
TTR-204ENST00000610404 RIMBP2O15034 1052 aa14.22□□□□□ -0.13
TTR-204ENST00000610404 POTEB3A0JP26 581 aa14.21□□□□□ -0.13
TTR-204ENST00000610404 ECM2O94769 699 aaPredicted RBP14.21□□□□□ -0.13
TTR-204ENST00000610404 POTEBQ6S5H4 581 aa14.21□□□□□ -0.13
TTR-204ENST00000610404 NEURL4Q96JN8 1562 aa14.21□□□□□ -0.14
TTR-204ENST00000610404 FBXO31Q5XUX0 539 aaPredicted RBP14.2□□□□□ -0.14
TTR-204ENST00000610404 TMEM92Q6UXU6 159 aa14.2□□□□□ -0.14
TTR-204ENST00000610404 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
TTR-204ENST00000610404 DHX29Q7Z478 1369 aaKnown RBP14.2□□□□□ -0.14
TTR-204ENST00000610404 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
TTR-204ENST00000610404 MMRN1Q13201 1228 aa14.19□□□□□ -0.14
TTR-204ENST00000610404 TNRQ92752 1358 aa14.19□□□□□ -0.14
TTR-204ENST00000610404 HSPA1LP34931 641 aa14.18□□□□□ -0.14
TTR-204ENST00000610404 POLR1AO95602 1720 aaPredicted RBP14.18□□□□□ -0.14
TTR-204ENST00000610404 EHBP1L1Q8N3D4 1523 aa14.17□□□□□ -0.14
TTR-204ENST00000610404 PIP4K2BP78356 416 aa14.17□□□□□ -0.14
TTR-204ENST00000610404 PZPP20742 1482 aa14.17□□□□□ -0.14
TTR-204ENST00000610404 MED1Q15648 1581 aaPredicted RBP14.17□□□□□ -0.14
TTR-204ENST00000610404 CPS1P31327 1500 aa14.16□□□□□ -0.14
TTR-204ENST00000610404 STK25O00506 426 aa14.16□□□□□ -0.14
TTR-204ENST00000610404 KIF3BO15066 747 aa14.16□□□□□ -0.14
TTR-204ENST00000610404 FBXO22Q8NEZ5 403 aa14.16□□□□□ -0.14
TTR-204ENST00000610404 SHANK2Q9UPX8 1470 aa14.16□□□□□ -0.14
TTR-204ENST00000610404 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
TTR-204ENST00000610404 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
TTR-204ENST00000610404 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
TTR-204ENST00000610404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.14□□□□□ -0.15
TTR-204ENST00000610404 KRTAP3-3Q9BYR6 98 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms