RNA–Protein interactions for RNA: ENST00000609752.1

LINC00484-208, long intergenic non-protein coding RNA 484, human

TSL 4 BASIC

Gene LINC00484, Length 591 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00484-208	ENST00000609752	LTBP4	Q8N2S1	1624 aa		10.95	□□□□□ -0.66
LINC00484-208	ENST00000609752	SLC24A1	O60721	1099 aa		10.95	□□□□□ -0.66
LINC00484-208	ENST00000609752	NUDT7	P0C024	238 aa		10.95	□□□□□ -0.66
LINC00484-208	ENST00000609752	EMP3	P54852	163 aa		10.95	□□□□□ -0.66
LINC00484-208	ENST00000609752	KHSRP	Q92945	711 aa	Known RBP eCLIP	10.95	□□□□□ -0.66
LINC00484-208	ENST00000609752	DISP1	Q96F81	1524 aa		10.94	□□□□□ -0.66
LINC00484-208	ENST00000609752	YEATS2	Q9ULM3	1422 aa		10.94	□□□□□ -0.66
LINC00484-208	ENST00000609752	DPYSL4	O14531	572 aa		10.94	□□□□□ -0.66
LINC00484-208	ENST00000609752	KCNV2	Q8TDN2	545 aa		10.94	□□□□□ -0.66
LINC00484-208	ENST00000609752	ARHGEF1	Q92888	912 aa	Known RBP	10.94	□□□□□ -0.66
LINC00484-208	ENST00000609752	KIAA0556	O60303	1618 aa		10.93	□□□□□ -0.66
LINC00484-208	ENST00000609752	SIGLEC1	Q9BZZ2	1709 aa		10.92	□□□□□ -0.66
LINC00484-208	ENST00000609752	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.92	□□□□□ -0.66
LINC00484-208	ENST00000609752	EVI5	O60447	810 aa		10.92	□□□□□ -0.66
LINC00484-208	ENST00000609752	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.91	□□□□□ -0.66
LINC00484-208	ENST00000609752	RICTOR	Q6R327	1708 aa		10.91	□□□□□ -0.66
LINC00484-208	ENST00000609752	FANCA	O15360	1455 aa		10.91	□□□□□ -0.66
LINC00484-208	ENST00000609752	ABCA9	Q8IUA7	1624 aa		10.91	□□□□□ -0.66
LINC00484-208	ENST00000609752	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.9	□□□□□ -0.66
LINC00484-208	ENST00000609752	PDIA6	Q15084	440 aa		10.9	□□□□□ -0.66
LINC00484-208	ENST00000609752	PHLDB1	Q86UU1	1377 aa		10.9	□□□□□ -0.67
LINC00484-208	ENST00000609752	ERBB3	P21860	1342 aa		10.89	□□□□□ -0.67
LINC00484-208	ENST00000609752	PSD	A5PKW4	1024 aa	Predicted RBP	10.89	□□□□□ -0.67
LINC00484-208	ENST00000609752	PTPRT	O14522	1441 aa		10.89	□□□□□ -0.67
LINC00484-208	ENST00000609752	POGZ	Q7Z3K3	1410 aa		10.89	□□□□□ -0.67
LINC00484-208	ENST00000609752	LHX6	Q9UPM6	363 aa		10.88	□□□□□ -0.67
LINC00484-208	ENST00000609752	NEO1	Q92859	1461 aa		10.87	□□□□□ -0.67
LINC00484-208	ENST00000609752	SETD1B	Q9UPS6	1966 aa	Known RBP	10.86	□□□□□ -0.67
LINC00484-208	ENST00000609752	UGGT2	Q9NYU1	1516 aa		10.86	□□□□□ -0.67
LINC00484-208	ENST00000609752	FAM205C	A6NFA0	338 aa		10.86	□□□□□ -0.67
LINC00484-208	ENST00000609752	HS3ST6	Q96QI5	342 aa		10.85	□□□□□ -0.67
LINC00484-208	ENST00000609752	POTEB3	A0JP26	581 aa		10.84	□□□□□ -0.67
LINC00484-208	ENST00000609752	VARS2	Q5ST30	1063 aa	Known RBP	10.84	□□□□□ -0.67
LINC00484-208	ENST00000609752	POTEB	Q6S5H4	581 aa		10.84	□□□□□ -0.67
LINC00484-208	ENST00000609752	ABCA8	O94911	1581 aa		10.84	□□□□□ -0.67
LINC00484-208	ENST00000609752	PTGER2	P43116	358 aa		10.83	□□□□□ -0.68
LINC00484-208	ENST00000609752	EFCAB5	A4FU69	1503 aa		10.83	□□□□□ -0.68
LINC00484-208	ENST00000609752	ZMYM4	Q5VZL5	1548 aa		10.83	□□□□□ -0.68
LINC00484-208	ENST00000609752	UHRF1BP1	Q6BDS2	1440 aa		10.83	□□□□□ -0.68
LINC00484-208	ENST00000609752	RAPGEF3	O95398	923 aa		10.82	□□□□□ -0.68
LINC00484-208	ENST00000609752	KCNH8	Q96L42	1107 aa		10.82	□□□□□ -0.68
LINC00484-208	ENST00000609752	ZFYVE16	Q7Z3T8	1539 aa		10.81	□□□□□ -0.68
LINC00484-208	ENST00000609752	ARHGEF12	Q9NZN5	1544 aa		10.81	□□□□□ -0.68
LINC00484-208	ENST00000609752	PPP4R3B	Q5MIZ7	849 aa		10.81	□□□□□ -0.68
LINC00484-208	ENST00000609752	SPNS2	Q8IVW8	549 aa		10.81	□□□□□ -0.68
LINC00484-208	ENST00000609752	AKNA	Q7Z591	1439 aa		10.81	□□□□□ -0.68
LINC00484-208	ENST00000609752	CFAP74	Q9C0B2	1584 aa		10.81	□□□□□ -0.68
LINC00484-208	ENST00000609752	IGF1R	P08069	1367 aa		10.8	□□□□□ -0.68
LINC00484-208	ENST00000609752	PHF14	O94880	888 aa		10.79	□□□□□ -0.68
LINC00484-208	ENST00000609752	FOSB	P53539	338 aa		10.79	□□□□□ -0.68
LINC00484-208	ENST00000609752	CTTNBP2	Q8WZ74	1663 aa		10.79	□□□□□ -0.68
LINC00484-208	ENST00000609752	KIF27	Q86VH2	1401 aa		10.78	□□□□□ -0.68
LINC00484-208	ENST00000609752	ZNF687	Q8N1G0	1237 aa		10.78	□□□□□ -0.68
LINC00484-208	ENST00000609752	ZNF454	Q8N9F8	522 aa		10.78	□□□□□ -0.68
LINC00484-208	ENST00000609752	UBAP1L	F5GYI3	381 aa		10.77	□□□□□ -0.69
LINC00484-208	ENST00000609752	C3	P01024	1663 aa		10.76	□□□□□ -0.69
LINC00484-208	ENST00000609752	MMRN1	Q13201	1228 aa		10.76	□□□□□ -0.69
LINC00484-208	ENST00000609752	FBXW7	Q969H0	707 aa		10.76	□□□□□ -0.69
LINC00484-208	ENST00000609752	EPAS1	Q99814	870 aa		10.76	□□□□□ -0.69
LINC00484-208	ENST00000609752	KRTAP3-3	Q9BYR6	98 aa		10.76	□□□□□ -0.69
LINC00484-208	ENST00000609752	KRTAP3-2	Q9BYR7	98 aa		10.76	□□□□□ -0.69
LINC00484-208	ENST00000609752	DENND4B	O75064	1496 aa	Predicted RBP	10.75	□□□□□ -0.69
LINC00484-208	ENST00000609752	DDX12P	Q92771	950 aa		10.75	□□□□□ -0.69
LINC00484-208	ENST00000609752	ZDHHC16	Q969W1	377 aa		10.75	□□□□□ -0.69
LINC00484-208	ENST00000609752	PCDHGA10	Q9Y5H3	936 aa		10.75	□□□□□ -0.69
LINC00484-208	ENST00000609752	FHOD3	Q2V2M9	1422 aa		10.75	□□□□□ -0.69
LINC00484-208	ENST00000609752	PBX2	P40425	430 aa		10.74	□□□□□ -0.69
LINC00484-208	ENST00000609752	TYW1B	Q6NUM6	668 aa		10.74	□□□□□ -0.69
LINC00484-208	ENST00000609752	CARMIL1	Q5VZK9	1371 aa		10.74	□□□□□ -0.69
LINC00484-208	ENST00000609752	NCOA1	Q15788	1441 aa		10.74	□□□□□ -0.69
LINC00484-208	ENST00000609752	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.73	□□□□□ -0.69
LINC00484-208	ENST00000609752	MAGI2	Q86UL8	1455 aa		10.73	□□□□□ -0.69
LINC00484-208	ENST00000609752	BCL2L12	Q9HB09	334 aa		10.72	□□□□□ -0.69
LINC00484-208	ENST00000609752	GRXCR2	A6NFK2	248 aa		10.71	□□□□□ -0.69
LINC00484-208	ENST00000609752	SEMA3E	O15041	775 aa		10.71	□□□□□ -0.69
LINC00484-208	ENST00000609752	NBR1	Q14596	966 aa		10.71	□□□□□ -0.69
LINC00484-208	ENST00000609752	HECW1	Q76N89	1606 aa		10.71	□□□□□ -0.69
LINC00484-208	ENST00000609752	TESPA1	A2RU30	521 aa	Predicted RBP	10.7	□□□□□ -0.7
LINC00484-208	ENST00000609752	HSPA1L	P34931	641 aa		10.7	□□□□□ -0.7
LINC00484-208	ENST00000609752	SETD1A	O15047	1707 aa	Known RBP	10.7	□□□□□ -0.7
LINC00484-208	ENST00000609752	MLEC	Q14165	292 aa		10.69	□□□□□ -0.7
LINC00484-208	ENST00000609752	ADAM33	Q9BZ11	813 aa		10.69	□□□□□ -0.7
LINC00484-208	ENST00000609752	CAMSAP1	Q5T5Y3	1602 aa		10.69	□□□□□ -0.7
LINC00484-208	ENST00000609752	GOLGA3	Q08378	1498 aa		10.68	□□□□□ -0.7
LINC00484-208	ENST00000609752	ARHGAP33	O14559	1287 aa		10.68	□□□□□ -0.7
LINC00484-208	ENST00000609752	MLLT3	P42568	568 aa	Predicted RBP	10.68	□□□□□ -0.7
LINC00484-208	ENST00000609752	SMYD5	Q6GMV2	418 aa		10.68	□□□□□ -0.7
LINC00484-208	ENST00000609752	OSBP	P22059	807 aa		10.67	□□□□□ -0.7
LINC00484-208	ENST00000609752	PTPRE	P23469	700 aa		10.67	□□□□□ -0.7
LINC00484-208	ENST00000609752	EN1	Q05925	392 aa	Predicted RBP	10.67	□□□□□ -0.7
LINC00484-208	ENST00000609752	C9orf84	Q5VXU9	1444 aa		10.67	□□□□□ -0.7
LINC00484-208	ENST00000609752	ZNF142	P52746	1687 aa	Predicted RBP	10.66	□□□□□ -0.7
LINC00484-208	ENST00000609752	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.65	□□□□□ -0.7
LINC00484-208	ENST00000609752	CEBPA	P49715	358 aa	Predicted RBP	10.65	□□□□□ -0.7
LINC00484-208	ENST00000609752	POTEE	Q6S8J3	1075 aa		10.65	□□□□□ -0.7
LINC00484-208	ENST00000609752	ATP10B	O94823	1461 aa		10.65	□□□□□ -0.7
LINC00484-208	ENST00000609752	MAP3K7	O43318	606 aa		10.64	□□□□□ -0.71
LINC00484-208	ENST00000609752	KCNK17	Q96T54	332 aa		10.64	□□□□□ -0.71
LINC00484-208	ENST00000609752	C6orf132	Q5T0Z8	1188 aa		10.63	□□□□□ -0.71
LINC00484-208	ENST00000609752	RBM33	Q96EV2	1170 aa	Known RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms