RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 PTPREP23469 700 aa13.16□□□□□ -0.3
LINC01990-201ENST00000609293 FOSBP53539 338 aa13.16□□□□□ -0.3
LINC01990-201ENST00000609293 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
LINC01990-201ENST00000609293 RAPGEF2Q9Y4G8 1499 aa13.16□□□□□ -0.3
LINC01990-201ENST00000609293 KCTD12Q96CX2 325 aaKnown RBP13.16□□□□□ -0.3
LINC01990-201ENST00000609293 VPS9D1Q9Y2B5 631 aa13.16□□□□□ -0.3
LINC01990-201ENST00000609293 EVI5O60447 810 aa13.15□□□□□ -0.3
LINC01990-201ENST00000609293 KIF21BO75037 1637 aa13.14□□□□□ -0.31
LINC01990-201ENST00000609293 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
LINC01990-201ENST00000609293 MAGI3Q5TCQ9 1506 aa13.12□□□□□ -0.31
LINC01990-201ENST00000609293 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
LINC01990-201ENST00000609293 MFSD10Q14728 455 aa13.11□□□□□ -0.31
LINC01990-201ENST00000609293 ZDHHC16Q969W1 377 aa13.1□□□□□ -0.31
LINC01990-201ENST00000609293 ABCA8O94911 1581 aa13.09□□□□□ -0.31
LINC01990-201ENST00000609293 GOLGA3Q08378 1498 aa13.08□□□□□ -0.31
LINC01990-201ENST00000609293 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
LINC01990-201ENST00000609293 ZBED2Q9BTP6 218 aa13.05□□□□□ -0.32
LINC01990-201ENST00000609293 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
LINC01990-201ENST00000609293 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
LINC01990-201ENST00000609293 NBPF3Q9H094 633 aa13.04□□□□□ -0.32
LINC01990-201ENST00000609293 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
LINC01990-201ENST00000609293 ADAMTSL3P82987 1691 aa13.03□□□□□ -0.32
LINC01990-201ENST00000609293 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
LINC01990-201ENST00000609293 PTPN5P54829 565 aa13.02□□□□□ -0.33
LINC01990-201ENST00000609293 ADAM33Q9BZ11 813 aa13.02□□□□□ -0.33
LINC01990-201ENST00000609293 ABCA9Q8IUA7 1624 aa12.99□□□□□ -0.33
LINC01990-201ENST00000609293 PTPRMP28827 1452 aa12.99□□□□□ -0.33
LINC01990-201ENST00000609293 EMILIN3Q9NT22 766 aa12.99□□□□□ -0.33
LINC01990-201ENST00000609293 WNT2BQ93097 391 aa12.98□□□□□ -0.33
LINC01990-201ENST00000609293 FBXW7Q969H0 707 aa12.98□□□□□ -0.33
LINC01990-201ENST00000609293 BCORL1Q5H9F3 1711 aa12.98□□□□□ -0.33
LINC01990-201ENST00000609293 THSD4Q6ZMP0 1018 aa12.97□□□□□ -0.33
LINC01990-201ENST00000609293 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
LINC01990-201ENST00000609293 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
LINC01990-201ENST00000609293 PPP1R3GB7ZBB8 358 aa12.97□□□□□ -0.33
LINC01990-201ENST00000609293 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.33
LINC01990-201ENST00000609293 ARID3CA6NKF2 412 aa12.96□□□□□ -0.34
LINC01990-201ENST00000609293 TYW1BQ6NUM6 668 aa12.96□□□□□ -0.34
LINC01990-201ENST00000609293 PCDHGA10Q9Y5H3 936 aa12.96□□□□□ -0.34
LINC01990-201ENST00000609293 PCF11O94913 1555 aaKnown RBP12.95□□□□□ -0.34
LINC01990-201ENST00000609293 PHF14O94880 888 aa12.95□□□□□ -0.34
LINC01990-201ENST00000609293 ATP10BO94823 1461 aa12.94□□□□□ -0.34
LINC01990-201ENST00000609293 RIMS1Q86UR5 1692 aaKnown RBP12.94□□□□□ -0.34
LINC01990-201ENST00000609293 NEO1Q92859 1461 aa12.93□□□□□ -0.34
LINC01990-201ENST00000609293 FRMPD1Q5SYB0 1578 aa12.93□□□□□ -0.34
LINC01990-201ENST00000609293 CADPS2Q86UW7 1296 aa12.93□□□□□ -0.34
LINC01990-201ENST00000609293 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
LINC01990-201ENST00000609293 IFFO2Q5TF58 517 aa12.92□□□□□ -0.34
LINC01990-201ENST00000609293 RABGEF1Q9UJ41 708 aa12.92□□□□□ -0.34
LINC01990-201ENST00000609293 PRXQ9BXM0 1461 aa12.92□□□□□ -0.34
LINC01990-201ENST00000609293 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
LINC01990-201ENST00000609293 RAPGEF3O95398 923 aa12.91□□□□□ -0.34
LINC01990-201ENST00000609293 EPAS1Q99814 870 aa12.91□□□□□ -0.34
LINC01990-201ENST00000609293 LMTK3Q96Q04 1460 aa12.9□□□□□ -0.34
LINC01990-201ENST00000609293 ARHGEF40Q8TER5 1519 aa12.9□□□□□ -0.34
LINC01990-201ENST00000609293 CAMK2BQ13554 666 aa12.9□□□□□ -0.34
LINC01990-201ENST00000609293 P3H3Q8IVL6 736 aa12.9□□□□□ -0.34
LINC01990-201ENST00000609293 SAMD9Q5K651 1589 aa12.9□□□□□ -0.34
LINC01990-201ENST00000609293 RICTORQ6R327 1708 aa12.89□□□□□ -0.35
LINC01990-201ENST00000609293 RGS20O76081 388 aa12.88□□□□□ -0.35
LINC01990-201ENST00000609293 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
LINC01990-201ENST00000609293 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
LINC01990-201ENST00000609293 CFAP74Q9C0B2 1584 aa12.88□□□□□ -0.35
LINC01990-201ENST00000609293 LAPTM4BQ86VI4 370 aa12.86□□□□□ -0.35
LINC01990-201ENST00000609293 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
LINC01990-201ENST00000609293 COL9A1P20849 921 aa12.85□□□□□ -0.35
LINC01990-201ENST00000609293 IRX2Q9BZI1 471 aaPredicted RBP12.85□□□□□ -0.35
LINC01990-201ENST00000609293 FANCAO15360 1455 aa12.84□□□□□ -0.35
LINC01990-201ENST00000609293 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
LINC01990-201ENST00000609293 DPYSL4O14531 572 aa12.84□□□□□ -0.35
LINC01990-201ENST00000609293 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
LINC01990-201ENST00000609293 FER1L4A9Z1Z3 1794 aa12.83□□□□□ -0.35
LINC01990-201ENST00000609293 POGZQ7Z3K3 1410 aa12.82□□□□□ -0.36
LINC01990-201ENST00000609293 NUP153P49790 1475 aaKnown RBP12.82□□□□□ -0.36
LINC01990-201ENST00000609293 EFCAB5A4FU69 1503 aa12.81□□□□□ -0.36
LINC01990-201ENST00000609293 ZMYM4Q5VZL5 1548 aa12.81□□□□□ -0.36
LINC01990-201ENST00000609293 HSPA2P54652 639 aa12.81□□□□□ -0.36
LINC01990-201ENST00000609293 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
LINC01990-201ENST00000609293 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
LINC01990-201ENST00000609293 SIGLEC1Q9BZZ2 1709 aa12.8□□□□□ -0.36
LINC01990-201ENST00000609293 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
LINC01990-201ENST00000609293 ZFYVE16Q7Z3T8 1539 aa12.8□□□□□ -0.36
LINC01990-201ENST00000609293 NYAP1Q6ZVC0 841 aa12.79□□□□□ -0.36
LINC01990-201ENST00000609293 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
LINC01990-201ENST00000609293 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
LINC01990-201ENST00000609293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01990-201ENST00000609293 A0A0G2JS52 829 aa12.78□□□□□ -0.36
LINC01990-201ENST00000609293 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
LINC01990-201ENST00000609293 PREX1Q8TCU6 1659 aa12.77□□□□□ -0.36
LINC01990-201ENST00000609293 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.77□□□□□ -0.37
LINC01990-201ENST00000609293 SOWAHBA6NEL2 793 aa12.76□□□□□ -0.37
LINC01990-201ENST00000609293 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
LINC01990-201ENST00000609293 CERKQ8TCT0 537 aa12.76□□□□□ -0.37
LINC01990-201ENST00000609293 HECW1Q76N89 1606 aa12.76□□□□□ -0.37
LINC01990-201ENST00000609293 MAGI2Q86UL8 1455 aa12.75□□□□□ -0.37
LINC01990-201ENST00000609293 YEATS2Q9ULM3 1422 aa12.75□□□□□ -0.37
LINC01990-201ENST00000609293 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
LINC01990-201ENST00000609293 ZFRQ96KR1 1074 aaKnown RBP12.75□□□□□ -0.37
LINC01990-201ENST00000609293 SPDYE16A6NNV3 312 aaPredicted RBP12.74□□□□□ -0.37
LINC01990-201ENST00000609293 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms