RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 AGLP35573 1532 aa15.71■□□□□ 0.11
LINC01278-204ENST00000609143 TMF1P82094 1093 aa15.71■□□□□ 0.11
LINC01278-204ENST00000609143 NRXN1Q9ULB1 1477 aa15.71■□□□□ 0.11
LINC01278-204ENST00000609143 PIK3C2BO00750 1634 aa15.71■□□□□ 0.1
LINC01278-204ENST00000609143 EIF3AQ14152 1382 aaKnown RBP15.7■□□□□ 0.1
LINC01278-204ENST00000609143 SYNMO15061 1565 aa15.7■□□□□ 0.1
LINC01278-204ENST00000609143 ADGRF5Q8IZF2 1346 aa15.7■□□□□ 0.1
LINC01278-204ENST00000609143 PPLO60437 1756 aa15.69■□□□□ 0.1
LINC01278-204ENST00000609143 RPGRIP1LQ68CZ1 1315 aa15.69■□□□□ 0.1
LINC01278-204ENST00000609143 DISP3Q9P2K9 1392 aa15.69■□□□□ 0.1
LINC01278-204ENST00000609143 MRS2Q9HD23 443 aa15.68■□□□□ 0.1
LINC01278-204ENST00000609143 ARHGEF40Q8TER5 1519 aa15.67■□□□□ 0.1
LINC01278-204ENST00000609143 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
LINC01278-204ENST00000609143 PREX1Q8TCU6 1659 aa15.66■□□□□ 0.1
LINC01278-204ENST00000609143 CFAP70Q5T0N1 1121 aa15.66■□□□□ 0.1
LINC01278-204ENST00000609143 SLC52A1Q9NWF4 448 aa15.66■□□□□ 0.1
LINC01278-204ENST00000609143 KTN1Q86UP2 1357 aaKnown RBP15.66■□□□□ 0.1
LINC01278-204ENST00000609143 CCDC184Q52MB2 194 aa15.65■□□□□ 0.1
LINC01278-204ENST00000609143 SETBP1Q9Y6X0 1596 aa15.64■□□□□ 0.09
LINC01278-204ENST00000609143 PIK3C2GO75747 1445 aa15.64■□□□□ 0.09
LINC01278-204ENST00000609143 CDCA8Q53HL2 280 aa15.64■□□□□ 0.09
LINC01278-204ENST00000609143 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
LINC01278-204ENST00000609143 HNRNPUQ00839 825 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC01278-204ENST00000609143 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
LINC01278-204ENST00000609143 IDI1Q13907 227 aa15.61■□□□□ 0.09
LINC01278-204ENST00000609143 RALBP1Q15311 655 aa15.61■□□□□ 0.09
LINC01278-204ENST00000609143 NEXMIFQ5QGS0 1516 aa15.61■□□□□ 0.09
LINC01278-204ENST00000609143 ERVK-7P63135 1459 aa15.6■□□□□ 0.09
LINC01278-204ENST00000609143 VGFO15240 615 aaPredicted RBP15.6■□□□□ 0.09
LINC01278-204ENST00000609143 CLTCQ00610 1675 aaKnown RBP15.6■□□□□ 0.09
LINC01278-204ENST00000609143 C14orf93Q9H972 538 aaKnown RBP15.6■□□□□ 0.09
LINC01278-204ENST00000609143 FAM9BQ8IZU0 186 aa15.59■□□□□ 0.09
LINC01278-204ENST00000609143 MYO3AQ8NEV4 1616 aa15.59■□□□□ 0.09
LINC01278-204ENST00000609143 TMEM131LA2VDJ0 1609 aa15.58■□□□□ 0.08
LINC01278-204ENST00000609143 MYBBP1AQ9BQG0 1328 aaKnown RBP15.58■□□□□ 0.08
LINC01278-204ENST00000609143 PER1O15534 1290 aaPredicted RBP15.58■□□□□ 0.08
LINC01278-204ENST00000609143 PANK3Q9H999 370 aa15.58■□□□□ 0.08
LINC01278-204ENST00000609143 KDM5AP29375 1690 aaKnown RBP15.57■□□□□ 0.08
LINC01278-204ENST00000609143 ZFYVE9O95405 1425 aa15.57■□□□□ 0.08
LINC01278-204ENST00000609143 ADGRB1O14514 1584 aa15.57■□□□□ 0.08
LINC01278-204ENST00000609143 SBNO2Q9Y2G9 1366 aa15.56■□□□□ 0.08
LINC01278-204ENST00000609143 PARD3Q8TEW0 1356 aa15.56■□□□□ 0.08
LINC01278-204ENST00000609143 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
LINC01278-204ENST00000609143 FBXO31Q5XUX0 539 aaPredicted RBP15.56■□□□□ 0.08
LINC01278-204ENST00000609143 MLECQ14165 292 aa15.55■□□□□ 0.08
LINC01278-204ENST00000609143 BRD4O60885 1362 aaPredicted RBP15.55■□□□□ 0.08
LINC01278-204ENST00000609143 TMC1Q8TDI8 760 aa15.55■□□□□ 0.08
LINC01278-204ENST00000609143 SPATA31D1Q6ZQQ2 1576 aa15.55■□□□□ 0.08
LINC01278-204ENST00000609143 CENPJQ9HC77 1338 aaPredicted RBP15.54■□□□□ 0.08
LINC01278-204ENST00000609143 ESF1Q9H501 851 aaKnown RBP15.53■□□□□ 0.08
LINC01278-204ENST00000609143 NUTM2DQ5VT03 806 aaPredicted RBP15.53■□□□□ 0.08
LINC01278-204ENST00000609143 MYOM1P52179 1685 aa15.52■□□□□ 0.08
LINC01278-204ENST00000609143 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.07
LINC01278-204ENST00000609143 TRAK1Q9UPV9 953 aa15.52■□□□□ 0.07
LINC01278-204ENST00000609143 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
LINC01278-204ENST00000609143 QRICH2Q9H0J4 1663 aa15.51■□□□□ 0.07
LINC01278-204ENST00000609143 TMEM132EQ6IEE7 984 aa15.51■□□□□ 0.07
LINC01278-204ENST00000609143 KNSTRNQ9Y448 316 aa15.5■□□□□ 0.07
LINC01278-204ENST00000609143 ZBED9Q6R2W3 1325 aa15.5■□□□□ 0.07
LINC01278-204ENST00000609143 PNISRQ8TF01 805 aaKnown RBP15.5■□□□□ 0.07
LINC01278-204ENST00000609143 CC2D1BQ5T0F9 858 aaKnown RBP15.49■□□□□ 0.07
LINC01278-204ENST00000609143 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
LINC01278-204ENST00000609143 ZMYM3Q14202 1370 aa15.47■□□□□ 0.07
LINC01278-204ENST00000609143 A2ML1A8K2U0 1454 aa15.47■□□□□ 0.07
LINC01278-204ENST00000609143 ASXL1Q8IXJ9 1541 aa15.47■□□□□ 0.07
LINC01278-204ENST00000609143 LRPPRCP42704 1394 aaKnown RBP15.46■□□□□ 0.06
LINC01278-204ENST00000609143 SUPT16HQ9Y5B9 1047 aaKnown RBP15.46■□□□□ 0.06
LINC01278-204ENST00000609143 NPC1L1Q9UHC9 1359 aa15.45■□□□□ 0.06
LINC01278-204ENST00000609143 NEFLP07196 543 aa15.44■□□□□ 0.06
LINC01278-204ENST00000609143 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
LINC01278-204ENST00000609143 RIMS2Q9UQ26 1411 aa15.43■□□□□ 0.06
LINC01278-204ENST00000609143 ALKQ9UM73 1620 aa15.42■□□□□ 0.06
LINC01278-204ENST00000609143 PUS7Q96PZ0 661 aaKnown RBP15.41■□□□□ 0.06
LINC01278-204ENST00000609143 EVC2Q86UK5 1308 aa15.41■□□□□ 0.06
LINC01278-204ENST00000609143 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
LINC01278-204ENST00000609143 TNRQ92752 1358 aa15.41■□□□□ 0.06
LINC01278-204ENST00000609143 YTHDC2Q9H6S0 1430 aaKnown RBP15.4■□□□□ 0.06
LINC01278-204ENST00000609143 STK26Q9P289 416 aa15.4■□□□□ 0.06
LINC01278-204ENST00000609143 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.39■□□□□ 0.05
LINC01278-204ENST00000609143 TULP4Q9NRJ4 1543 aa15.39■□□□□ 0.05
LINC01278-204ENST00000609143 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.05
LINC01278-204ENST00000609143 FKBP8Q14318 412 aa15.38■□□□□ 0.05
LINC01278-204ENST00000609143 PTPRMP28827 1452 aa15.38■□□□□ 0.05
LINC01278-204ENST00000609143 INSRP06213 1382 aa15.38■□□□□ 0.05
LINC01278-204ENST00000609143 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
LINC01278-204ENST00000609143 HDGFP51858 240 aaKnown RBP15.37■□□□□ 0.05
LINC01278-204ENST00000609143 CARD14Q9BXL6 1004 aa15.36■□□□□ 0.05
LINC01278-204ENST00000609143 POGKQ9P215 609 aa15.36■□□□□ 0.05
LINC01278-204ENST00000609143 SETD1AO15047 1707 aaKnown RBP15.35■□□□□ 0.05
LINC01278-204ENST00000609143 SAFB2Q14151 953 aaKnown RBP eCLIP15.35■□□□□ 0.05
LINC01278-204ENST00000609143 PRAM1Q96QH2 718 aa15.34■□□□□ 0.05
LINC01278-204ENST00000609143 SLC12A5Q9H2X9 1139 aa15.34■□□□□ 0.05
LINC01278-204ENST00000609143 UBR1Q8IWV7 1749 aa15.34■□□□□ 0.05
LINC01278-204ENST00000609143 DLC1Q96QB1 1528 aa15.34■□□□□ 0.05
LINC01278-204ENST00000609143 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
LINC01278-204ENST00000609143 SMG6Q86US8 1419 aaKnown RBP15.33■□□□□ 0.05
LINC01278-204ENST00000609143 NLRP1Q9C000 1473 aa15.33■□□□□ 0.04
LINC01278-204ENST00000609143 NINLQ9Y2I6 1382 aa15.33■□□□□ 0.04
LINC01278-204ENST00000609143 USP32Q8NFA0 1604 aa15.33■□□□□ 0.04
LINC01278-204ENST00000609143 BLMP54132 1417 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms