RNA–Protein interactions for RNA: ENST00000608259.1

AC016542.1-201, humanhuman

BASIC

Gene AC016542.1, Length 493 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016542.1-201ENST00000608259 PTPN5P54829 565 aa13.46□□□□□ -0.25
AC016542.1-201ENST00000608259 SLC24A3Q9HC58 644 aa13.46□□□□□ -0.25
AC016542.1-201ENST00000608259 TPRNQ4KMQ1 711 aa13.44□□□□□ -0.26
AC016542.1-201ENST00000608259 AK7Q96M32 723 aa13.43□□□□□ -0.26
AC016542.1-201ENST00000608259 HCSTQ9UBK5 93 aa13.43□□□□□ -0.26
AC016542.1-201ENST00000608259 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
AC016542.1-201ENST00000608259 RNF40O75150 1001 aa13.41□□□□□ -0.26
AC016542.1-201ENST00000608259 SLF2Q8IX21 1173 aa13.41□□□□□ -0.26
AC016542.1-201ENST00000608259 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
AC016542.1-201ENST00000608259 TSR3Q9UJK0 312 aaKnown RBP13.41□□□□□ -0.26
AC016542.1-201ENST00000608259 DAXXQ9UER7 740 aaPredicted RBP13.4□□□□□ -0.26
AC016542.1-201ENST00000608259 TRIM66O15016 1216 aa13.39□□□□□ -0.27
AC016542.1-201ENST00000608259 PPP4CP60510 307 aa13.39□□□□□ -0.27
AC016542.1-201ENST00000608259 MDM2Q00987 491 aaPredicted RBP13.39□□□□□ -0.27
AC016542.1-201ENST00000608259 SLC4A3P48751 1232 aa13.37□□□□□ -0.27
AC016542.1-201ENST00000608259 AMHR2Q16671 573 aa13.35□□□□□ -0.27
AC016542.1-201ENST00000608259 SLC10A3P09131 477 aa13.34□□□□□ -0.27
AC016542.1-201ENST00000608259 TMUB1Q9BVT8 246 aa13.34□□□□□ -0.27
AC016542.1-201ENST00000608259 CLCN1P35523 988 aa13.33□□□□□ -0.28
AC016542.1-201ENST00000608259 REPIN1Q9BWE0 567 aaKnown RBP13.33□□□□□ -0.28
AC016542.1-201ENST00000608259 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
AC016542.1-201ENST00000608259 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
AC016542.1-201ENST00000608259 GPCPD1Q9NPB8 672 aa13.32□□□□□ -0.28
AC016542.1-201ENST00000608259 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
AC016542.1-201ENST00000608259 NYAP1Q6ZVC0 841 aa13.3□□□□□ -0.28
AC016542.1-201ENST00000608259 NECTIN2Q92692 538 aa13.3□□□□□ -0.28
AC016542.1-201ENST00000608259 APLP1P51693 650 aa13.29□□□□□ -0.28
AC016542.1-201ENST00000608259 PDE4DQ08499 809 aa13.29□□□□□ -0.28
AC016542.1-201ENST00000608259 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
AC016542.1-201ENST00000608259 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
AC016542.1-201ENST00000608259 RDH13Q8NBN7 331 aa13.28□□□□□ -0.28
AC016542.1-201ENST00000608259 PARP9Q8IXQ6 854 aa13.27□□□□□ -0.29
AC016542.1-201ENST00000608259 FAM217BQ9NTX9 383 aaPredicted RBP13.27□□□□□ -0.29
AC016542.1-201ENST00000608259 CFHP08603 1231 aa13.26□□□□□ -0.29
AC016542.1-201ENST00000608259 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
AC016542.1-201ENST00000608259 CD46P15529 392 aa13.23□□□□□ -0.29
AC016542.1-201ENST00000608259 SSTR3P32745 418 aaPredicted RBP13.23□□□□□ -0.29
AC016542.1-201ENST00000608259 KMT5BQ4FZB7 885 aa13.22□□□□□ -0.29
AC016542.1-201ENST00000608259 GCGRP47871 477 aa13.21□□□□□ -0.29
AC016542.1-201ENST00000608259 PRR14Q9BWN1 585 aa13.21□□□□□ -0.29
AC016542.1-201ENST00000608259 ACTN4O43707 911 aaKnown RBP13.2□□□□□ -0.3
AC016542.1-201ENST00000608259 MS4A1P11836 297 aa13.17□□□□□ -0.3
AC016542.1-201ENST00000608259 PCDHB3Q9Y5E6 796 aa13.16□□□□□ -0.3
AC016542.1-201ENST00000608259 TJAP1Q5JTD0 557 aa13.15□□□□□ -0.3
AC016542.1-201ENST00000608259 MTRQ99707 1265 aa13.15□□□□□ -0.3
AC016542.1-201ENST00000608259 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
AC016542.1-201ENST00000608259 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
AC016542.1-201ENST00000608259 COPS2P61201 443 aa13.13□□□□□ -0.31
AC016542.1-201ENST00000608259 FUT2Q10981 343 aa13.13□□□□□ -0.31
AC016542.1-201ENST00000608259 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
AC016542.1-201ENST00000608259 PLA2G2EQ9NZK7 142 aa13.13□□□□□ -0.31
AC016542.1-201ENST00000608259 PUS10Q3MIT2 529 aaKnown RBP13.12□□□□□ -0.31
AC016542.1-201ENST00000608259 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
AC016542.1-201ENST00000608259 KDM4AO75164 1064 aa13.11□□□□□ -0.31
AC016542.1-201ENST00000608259 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
AC016542.1-201ENST00000608259 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
AC016542.1-201ENST00000608259 ZNF516Q92618 1163 aa13.1□□□□□ -0.31
AC016542.1-201ENST00000608259 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
AC016542.1-201ENST00000608259 KCNC4Q03721 635 aa13.09□□□□□ -0.31
AC016542.1-201ENST00000608259 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
AC016542.1-201ENST00000608259 NUTM1Q86Y26 1132 aa13.08□□□□□ -0.32
AC016542.1-201ENST00000608259 MORN1Q5T089 497 aa13.07□□□□□ -0.32
AC016542.1-201ENST00000608259 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
AC016542.1-201ENST00000608259 USP46P62068 366 aa13.06□□□□□ -0.32
AC016542.1-201ENST00000608259 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
AC016542.1-201ENST00000608259 ZPR1O75312 459 aa13.05□□□□□ -0.32
AC016542.1-201ENST00000608259 NR1I2O75469 434 aa13.05□□□□□ -0.32
AC016542.1-201ENST00000608259 SCUBE3Q8IX30 993 aa13.05□□□□□ -0.32
AC016542.1-201ENST00000608259 HOXA2O43364 376 aa13.04□□□□□ -0.32
AC016542.1-201ENST00000608259 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
AC016542.1-201ENST00000608259 IFFO2Q5TF58 517 aa13.04□□□□□ -0.32
AC016542.1-201ENST00000608259 HLA-CQ95604 372 aa13.04□□□□□ -0.32
AC016542.1-201ENST00000608259 TBC1D2Q9BYX2 928 aa13.03□□□□□ -0.32
AC016542.1-201ENST00000608259 SLC27A5Q9Y2P5 690 aa13.03□□□□□ -0.32
AC016542.1-201ENST00000608259 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
AC016542.1-201ENST00000608259 FAM117AQ9C073 453 aa13.02□□□□□ -0.33
AC016542.1-201ENST00000608259 GUCA2AQ02747 115 aa13□□□□□ -0.33
AC016542.1-201ENST00000608259 MOXD2PA6NHM9 499 aa12.99□□□□□ -0.33
AC016542.1-201ENST00000608259 TLL1O43897 1013 aa12.99□□□□□ -0.33
AC016542.1-201ENST00000608259 NDUFV2P19404 249 aa12.99□□□□□ -0.33
AC016542.1-201ENST00000608259 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
AC016542.1-201ENST00000608259 PLEKHG3A1L390 1219 aa12.96□□□□□ -0.33
AC016542.1-201ENST00000608259 THAP11Q96EK4 314 aa12.96□□□□□ -0.33
AC016542.1-201ENST00000608259 DDRGK1Q96HY6 314 aa12.96□□□□□ -0.33
AC016542.1-201ENST00000608259 BRICD5Q6PL45 260 aa12.95□□□□□ -0.34
AC016542.1-201ENST00000608259 PCDHGC3Q9UN70 934 aa12.95□□□□□ -0.34
AC016542.1-201ENST00000608259 FDX1P10109 184 aa12.94□□□□□ -0.34
AC016542.1-201ENST00000608259 MYSM1Q5VVJ2 828 aa12.94□□□□□ -0.34
AC016542.1-201ENST00000608259 RNF19BQ6ZMZ0 732 aa12.94□□□□□ -0.34
AC016542.1-201ENST00000608259 SALL2Q9Y467 1007 aaPredicted RBP12.94□□□□□ -0.34
AC016542.1-201ENST00000608259 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
AC016542.1-201ENST00000608259 Q3C1V9 767 aa12.93□□□□□ -0.34
AC016542.1-201ENST00000608259 SPSB2Q99619 263 aa12.93□□□□□ -0.34
AC016542.1-201ENST00000608259 A0A0G2JS52 829 aa12.92□□□□□ -0.34
AC016542.1-201ENST00000608259 ADH1BP00325 375 aa12.92□□□□□ -0.34
AC016542.1-201ENST00000608259 RSBN1LQ6PCB5 846 aaPredicted RBP12.92□□□□□ -0.34
AC016542.1-201ENST00000608259 IL27Q8NEV9 243 aa12.92□□□□□ -0.34
AC016542.1-201ENST00000608259 SPTLC1O15269 473 aa12.91□□□□□ -0.34
AC016542.1-201ENST00000608259 RIC3Q7Z5B4 369 aa12.91□□□□□ -0.34
AC016542.1-201ENST00000608259 RSPH6AQ9H0K4 717 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms