RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 RIMS2Q9UQ26 1411 aa28.78■■■□□ 2.2
CTSA-217ENST00000607482 HFM1A2PYH4 1435 aa28.77■■■□□ 2.2
CTSA-217ENST00000607482 ZNF326Q5BKZ1 582 aaKnown RBP28.76■■■□□ 2.19
CTSA-217ENST00000607482 NUTM2DQ5VT03 806 aaPredicted RBP28.76■■■□□ 2.19
CTSA-217ENST00000607482 TMEM131LA2VDJ0 1609 aa28.74■■■□□ 2.19
CTSA-217ENST00000607482 LRRC7Q96NW7 1537 aa28.74■■■□□ 2.19
CTSA-217ENST00000607482 KCNA6P17658 529 aa28.73■■■□□ 2.19
CTSA-217ENST00000607482 SLC4A1APQ9BWU0 796 aaKnown RBP28.73■■■□□ 2.19
CTSA-217ENST00000607482 PROSER2Q86WR7 435 aaPredicted RBP28.71■■■□□ 2.19
CTSA-217ENST00000607482 PLEKHG1Q9ULL1 1385 aa28.71■■■□□ 2.19
CTSA-217ENST00000607482 MYO5BQ9ULV0 1848 aa28.71■■■□□ 2.19
CTSA-217ENST00000607482 ZFYVE9O95405 1425 aa28.7■■■□□ 2.19
CTSA-217ENST00000607482 STRCP1A6NGW2 1772 aa28.69■■■□□ 2.18
CTSA-217ENST00000607482 SPHKAPQ2M3C7 1700 aa28.66■■■□□ 2.18
CTSA-217ENST00000607482 TBX22Q9Y458 520 aa28.63■■■□□ 2.17
CTSA-217ENST00000607482 HSPA1LP34931 641 aa28.62■■■□□ 2.17
CTSA-217ENST00000607482 TMEM94Q12767 1356 aa28.62■■■□□ 2.17
CTSA-217ENST00000607482 DISP3Q9P2K9 1392 aa28.62■■■□□ 2.17
CTSA-217ENST00000607482 RBM33Q96EV2 1170 aaKnown RBP28.6■■■□□ 2.17
CTSA-217ENST00000607482 C14orf37Q86TY3 774 aa28.59■■■□□ 2.17
CTSA-217ENST00000607482 TRPM2O94759 1503 aa28.57■■■□□ 2.16
CTSA-217ENST00000607482 ACIN1Q9UKV3 1341 aaKnown RBP28.56■■■□□ 2.16
CTSA-217ENST00000607482 NKTRP30414 1462 aaKnown RBP28.55■■■□□ 2.16
CTSA-217ENST00000607482 MSH6P52701 1360 aa28.52■■■□□ 2.16
CTSA-217ENST00000607482 CLTCL1P53675 1640 aa28.52■■■□□ 2.16
CTSA-217ENST00000607482 FOXD1Q16676 465 aa28.52■■■□□ 2.16
CTSA-217ENST00000607482 MPHOSPH9Q99550 1183 aa28.51■■■□□ 2.15
CTSA-217ENST00000607482 DIP2AQ14689 1571 aa28.5■■■□□ 2.15
CTSA-217ENST00000607482 KIF1BO60333 1816 aa28.49■■■□□ 2.15
CTSA-217ENST00000607482 ADAMTS13Q76LX8 1427 aa28.49■■■□□ 2.15
CTSA-217ENST00000607482 NWD1Q149M9 1564 aa28.49■■■□□ 2.15
CTSA-217ENST00000607482 PIK3R4Q99570 1358 aa28.49■■■□□ 2.15
CTSA-217ENST00000607482 SETD5Q9C0A6 1442 aa28.48■■■□□ 2.15
CTSA-217ENST00000607482 VGFO15240 615 aaPredicted RBP28.47■■■□□ 2.15
CTSA-217ENST00000607482 AMOTL2Q9Y2J4 779 aa28.47■■■□□ 2.15
CTSA-217ENST00000607482 CHD2O14647 1828 aaKnown RBP28.45■■■□□ 2.14
CTSA-217ENST00000607482 XIRP1Q702N8 1843 aaKnown RBP28.45■■■□□ 2.14
CTSA-217ENST00000607482 ALKQ9UM73 1620 aa28.44■■■□□ 2.14
CTSA-217ENST00000607482 CCDC144AA2RUR9 1427 aa28.43■■■□□ 2.14
CTSA-217ENST00000607482 RPGRIP1LQ68CZ1 1315 aa28.43■■■□□ 2.14
CTSA-217ENST00000607482 ATF3P18847 181 aa28.41■■■□□ 2.14
CTSA-217ENST00000607482 SLAIN2Q9P270 581 aa28.4■■■□□ 2.14
CTSA-217ENST00000607482 RGL3Q3MIN7 710 aa28.39■■■□□ 2.14
CTSA-217ENST00000607482 NEXMIFQ5QGS0 1516 aa28.38■■■□□ 2.13
CTSA-217ENST00000607482 SETBP1Q9Y6X0 1596 aa28.38■■■□□ 2.13
CTSA-217ENST00000607482 FAM135BQ49AJ0 1406 aa28.37■■■□□ 2.13
CTSA-217ENST00000607482 C19orf44Q9H6X5 657 aa28.37■■■□□ 2.13
CTSA-217ENST00000607482 NCOA3Q9Y6Q9 1424 aa28.36■■■□□ 2.13
CTSA-217ENST00000607482 CADPS2Q86UW7 1296 aa28.36■■■□□ 2.13
CTSA-217ENST00000607482 RAB3GAP2Q9H2M9 1393 aa28.36■■■□□ 2.13
CTSA-217ENST00000607482 METP08581 1390 aa28.34■■■□□ 2.13
CTSA-217ENST00000607482 PHF23Q9BUL5 403 aaPredicted RBP28.33■■■□□ 2.13
CTSA-217ENST00000607482 PTPRUQ92729 1446 aa28.32■■■□□ 2.12
CTSA-217ENST00000607482 NRXN3Q9Y4C0 1643 aa28.3■■■□□ 2.12
CTSA-217ENST00000607482 ROBO1Q9Y6N7 1651 aa28.27■■■□□ 2.12
CTSA-217ENST00000607482 ANKRD30BQ9BXX2 1392 aa28.24■■■□□ 2.11
CTSA-217ENST00000607482 ILDR2Q71H61 639 aa28.23■■■□□ 2.11
CTSA-217ENST00000607482 MED1Q15648 1581 aaPredicted RBP28.23■■■□□ 2.11
CTSA-217ENST00000607482 PPLO60437 1756 aa28.21■■■□□ 2.11
CTSA-217ENST00000607482 XRN1Q8IZH2 1706 aaKnown RBP28.21■■■□□ 2.11
CTSA-217ENST00000607482 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.21■■■□□ 2.11
CTSA-217ENST00000607482 ADGRF5Q8IZF2 1346 aa28.19■■■□□ 2.1
CTSA-217ENST00000607482 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
CTSA-217ENST00000607482 HRCP23327 699 aa28.17■■■□□ 2.1
CTSA-217ENST00000607482 STK26Q9P289 416 aa28.16■■■□□ 2.1
CTSA-217ENST00000607482 DCCP43146 1447 aa28.16■■■□□ 2.1
CTSA-217ENST00000607482 PHLPP1O60346 1717 aa28.13■■■□□ 2.09
CTSA-217ENST00000607482 ADGRL3Q9HAR2 1447 aa28.12■■■□□ 2.09
CTSA-217ENST00000607482 PTCH1Q13635 1447 aa28.11■■■□□ 2.09
CTSA-217ENST00000607482 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
CTSA-217ENST00000607482 BRINP3Q76B58 766 aa28.1■■■□□ 2.09
CTSA-217ENST00000607482 JCADQ9P266 1359 aa28.09■■■□□ 2.09
CTSA-217ENST00000607482 TMEM132EQ6IEE7 984 aa28.08■■■□□ 2.09
CTSA-217ENST00000607482 SOCS7O14512 581 aa28.06■■■□□ 2.08
CTSA-217ENST00000607482 SETD1AO15047 1707 aaKnown RBP28.06■■■□□ 2.08
CTSA-217ENST00000607482 MST1RQ04912 1400 aa28.04■■■□□ 2.08
CTSA-217ENST00000607482 KDM2AQ9Y2K7 1162 aa28.04■■■□□ 2.08
CTSA-217ENST00000607482 PIK3C2GO75747 1445 aa28.03■■■□□ 2.08
CTSA-217ENST00000607482 IFT172Q9UG01 1749 aa28.03■■■□□ 2.08
CTSA-217ENST00000607482 MEX3CQ5U5Q3 659 aaKnown RBP28.02■■■□□ 2.08
CTSA-217ENST00000607482 NALCNQ8IZF0 1738 aa28.01■■■□□ 2.07
CTSA-217ENST00000607482 LRPPRCP42704 1394 aaKnown RBP28.01■■■□□ 2.07
CTSA-217ENST00000607482 DCAF11Q8TEB1 546 aa28.01■■■□□ 2.07
CTSA-217ENST00000607482 C14orf93Q9H972 538 aaKnown RBP28■■■□□ 2.07
CTSA-217ENST00000607482 ASXL1Q8IXJ9 1541 aa28■■■□□ 2.07
CTSA-217ENST00000607482 CFAP70Q5T0N1 1121 aa27.99■■■□□ 2.07
CTSA-217ENST00000607482 WAPLQ7Z5K2 1190 aa27.99■■■□□ 2.07
CTSA-217ENST00000607482 DHX57Q6P158 1386 aaKnown RBP27.99■■■□□ 2.07
CTSA-217ENST00000607482 AHDC1Q5TGY3 1603 aaPredicted RBP27.98■■■□□ 2.07
CTSA-217ENST00000607482 PRAG1Q86YV5 1406 aa27.98■■■□□ 2.07
CTSA-217ENST00000607482 MYOM2P54296 1465 aa27.97■■■□□ 2.07
CTSA-217ENST00000607482 COL16A1Q07092 1604 aaPredicted RBP27.97■■■□□ 2.07
CTSA-217ENST00000607482 ABCC11Q96J66 1382 aa27.97■■■□□ 2.07
CTSA-217ENST00000607482 SPATA31A6Q5VVP1 1343 aa27.96■■■□□ 2.07
CTSA-217ENST00000607482 YTHDC2Q9H6S0 1430 aaKnown RBP27.96■■■□□ 2.07
CTSA-217ENST00000607482 LRRC59Q96AG4 307 aaKnown RBP27.96■■■□□ 2.07
CTSA-217ENST00000607482 C1orf167Q5SNV9 1468 aa27.95■■■□□ 2.07
CTSA-217ENST00000607482 NUTM2BA6NNL0 878 aaPredicted RBP27.94■■■□□ 2.06
CTSA-217ENST00000607482 NUTM2EB1AL46 878 aaPredicted RBP27.94■■■□□ 2.06
CTSA-217ENST00000607482 NUTM2AQ8IVF1 878 aaPredicted RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms