RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 MED1Q15648 1581 aaPredicted RBP33.47■■■□□ 2.95
TMEM248-207ENST00000607045 XIRP1Q702N8 1843 aaKnown RBP33.45■■■□□ 2.95
TMEM248-207ENST00000607045 HDGFP51858 240 aaKnown RBP33.44■■■□□ 2.94
TMEM248-207ENST00000607045 NUTM2DQ5VT03 806 aaPredicted RBP33.44■■■□□ 2.94
TMEM248-207ENST00000607045 NUP155O75694 1391 aa33.44■■■□□ 2.94
TMEM248-207ENST00000607045 PPP1R15AO75807 674 aaPredicted RBP33.43■■■□□ 2.94
TMEM248-207ENST00000607045 ZFYVE9O95405 1425 aa33.43■■■□□ 2.94
TMEM248-207ENST00000607045 RIMS2Q9UQ26 1411 aa33.43■■■□□ 2.94
TMEM248-207ENST00000607045 UNC13BO14795 1591 aa33.4■■■□□ 2.94
TMEM248-207ENST00000607045 PLEKHG1Q9ULL1 1385 aa33.39■■■□□ 2.94
TMEM248-207ENST00000607045 PHF23Q9BUL5 403 aaPredicted RBP33.38■■■□□ 2.93
TMEM248-207ENST00000607045 FAM135BQ49AJ0 1406 aa33.36■■■□□ 2.93
TMEM248-207ENST00000607045 TBX22Q9Y458 520 aa33.36■■■□□ 2.93
TMEM248-207ENST00000607045 TMEM131LA2VDJ0 1609 aa33.35■■■□□ 2.93
TMEM248-207ENST00000607045 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.35■■■□□ 2.93
TMEM248-207ENST00000607045 MYO5BQ9ULV0 1848 aa33.34■■■□□ 2.93
TMEM248-207ENST00000607045 E9PCH4 1651 aa33.33■■■□□ 2.93
TMEM248-207ENST00000607045 GCC2Q8IWJ2 1684 aa33.33■■■□□ 2.93
TMEM248-207ENST00000607045 IQGAP3Q86VI3 1631 aa33.28■■■□□ 2.92
TMEM248-207ENST00000607045 SLAIN2Q9P270 581 aa33.28■■■□□ 2.92
TMEM248-207ENST00000607045 NKTRP30414 1462 aaKnown RBP33.26■■■□□ 2.92
TMEM248-207ENST00000607045 NWD1Q149M9 1564 aa33.26■■■□□ 2.91
TMEM248-207ENST00000607045 MSH6P52701 1360 aa33.24■■■□□ 2.91
TMEM248-207ENST00000607045 RGS17Q9UGC6 210 aaPredicted RBP33.24■■■□□ 2.91
TMEM248-207ENST00000607045 ADAMTS13Q76LX8 1427 aa33.24■■■□□ 2.91
TMEM248-207ENST00000607045 CHD2O14647 1828 aaKnown RBP33.19■■■□□ 2.9
TMEM248-207ENST00000607045 C14orf37Q86TY3 774 aa33.17■■■□□ 2.9
TMEM248-207ENST00000607045 AMOTL2Q9Y2J4 779 aa33.16■■■□□ 2.9
TMEM248-207ENST00000607045 ROBO1Q9Y6N7 1651 aa33.16■■■□□ 2.9
TMEM248-207ENST00000607045 RRBP1Q9P2E9 1410 aaKnown RBP33.14■■■□□ 2.9
TMEM248-207ENST00000607045 ZNF326Q5BKZ1 582 aaKnown RBP33.14■■■□□ 2.9
TMEM248-207ENST00000607045 C19orf44Q9H6X5 657 aa33.11■■■□□ 2.89
TMEM248-207ENST00000607045 PTPRUQ92729 1446 aa33.11■■■□□ 2.89
TMEM248-207ENST00000607045 PIK3R4Q99570 1358 aa33.1■■■□□ 2.89
TMEM248-207ENST00000607045 NCOA3Q9Y6Q9 1424 aa33.1■■■□□ 2.89
TMEM248-207ENST00000607045 NAIPQ13075 1403 aa33.09■■■□□ 2.89
TMEM248-207ENST00000607045 ATF3P18847 181 aa33.05■■■□□ 2.88
TMEM248-207ENST00000607045 CADPS2Q86UW7 1296 aa33.05■■■□□ 2.88
TMEM248-207ENST00000607045 TRIM52Q96A61 297 aa33.04■■■□□ 2.88
TMEM248-207ENST00000607045 POTEAQ6S8J7 498 aa33.03■■■□□ 2.88
TMEM248-207ENST00000607045 DIP2AQ14689 1571 aa33.02■■■□□ 2.88
TMEM248-207ENST00000607045 METP08581 1390 aa33■■■□□ 2.87
TMEM248-207ENST00000607045 TRPM2O94759 1503 aa32.99■■■□□ 2.87
TMEM248-207ENST00000607045 SPHKAPQ2M3C7 1700 aa32.99■■■□□ 2.87
TMEM248-207ENST00000607045 JCADQ9P266 1359 aa32.96■■■□□ 2.87
TMEM248-207ENST00000607045 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.95■■■□□ 2.87
TMEM248-207ENST00000607045 PHLPP1O60346 1717 aa32.94■■■□□ 2.86
TMEM248-207ENST00000607045 NRXN3Q9Y4C0 1643 aa32.93■■■□□ 2.86
TMEM248-207ENST00000607045 SLC4A1APQ9BWU0 796 aaKnown RBP32.93■■■□□ 2.86
TMEM248-207ENST00000607045 CLTCL1P53675 1640 aa32.92■■■□□ 2.86
TMEM248-207ENST00000607045 BRINP3Q76B58 766 aa32.92■■■□□ 2.86
TMEM248-207ENST00000607045 SETBP1Q9Y6X0 1596 aa32.92■■■□□ 2.86
TMEM248-207ENST00000607045 HFM1A2PYH4 1435 aa32.9■■■□□ 2.86
TMEM248-207ENST00000607045 NEXMIFQ5QGS0 1516 aa32.87■■■□□ 2.85
TMEM248-207ENST00000607045 FOXD1Q16676 465 aa32.86■■■□□ 2.85
TMEM248-207ENST00000607045 COL16A1Q07092 1604 aaPredicted RBP32.85■■■□□ 2.85
TMEM248-207ENST00000607045 VGFO15240 615 aaPredicted RBP32.85■■■□□ 2.85
TMEM248-207ENST00000607045 XRN1Q8IZH2 1706 aaKnown RBP32.82■■■□□ 2.84
TMEM248-207ENST00000607045 SPATA31A6Q5VVP1 1343 aa32.8■■■□□ 2.84
TMEM248-207ENST00000607045 DCCP43146 1447 aa32.78■■■□□ 2.84
TMEM248-207ENST00000607045 RPGRIP1LQ68CZ1 1315 aa32.77■■■□□ 2.84
TMEM248-207ENST00000607045 MST1RQ04912 1400 aa32.77■■■□□ 2.84
TMEM248-207ENST00000607045 AHDC1Q5TGY3 1603 aaPredicted RBP32.77■■■□□ 2.84
TMEM248-207ENST00000607045 DDX17Q92841 729 aaKnown RBP32.77■■■□□ 2.84
TMEM248-207ENST00000607045 LRP6O75581 1613 aa32.77■■■□□ 2.84
TMEM248-207ENST00000607045 MEX3CQ5U5Q3 659 aaKnown RBP32.76■■■□□ 2.83
TMEM248-207ENST00000607045 KIF1BO60333 1816 aa32.76■■■□□ 2.83
TMEM248-207ENST00000607045 NUTM2BA6NNL0 878 aaPredicted RBP32.74■■■□□ 2.83
TMEM248-207ENST00000607045 NUTM2EB1AL46 878 aaPredicted RBP32.74■■■□□ 2.83
TMEM248-207ENST00000607045 NUTM2AQ8IVF1 878 aaPredicted RBP32.74■■■□□ 2.83
TMEM248-207ENST00000607045 ADGRL3Q9HAR2 1447 aa32.72■■■□□ 2.83
TMEM248-207ENST00000607045 ROBO2Q9HCK4 1378 aa32.7■■■□□ 2.83
TMEM248-207ENST00000607045 MPHOSPH9Q99550 1183 aa32.7■■■□□ 2.83
TMEM248-207ENST00000607045 ASXL1Q8IXJ9 1541 aa32.7■■■□□ 2.83
TMEM248-207ENST00000607045 RGL3Q3MIN7 710 aa32.69■■■□□ 2.82
TMEM248-207ENST00000607045 LRRC59Q96AG4 307 aaKnown RBP32.68■■■□□ 2.82
TMEM248-207ENST00000607045 ZNF772Q68DY9 489 aaPredicted RBP32.65■■■□□ 2.82
TMEM248-207ENST00000607045 ADGRF5Q8IZF2 1346 aa32.65■■■□□ 2.82
TMEM248-207ENST00000607045 SETD5Q9C0A6 1442 aa32.65■■■□□ 2.82
TMEM248-207ENST00000607045 ORAI2Q96SN7 254 aa32.64■■■□□ 2.82
TMEM248-207ENST00000607045 C1orf167Q5SNV9 1468 aa32.61■■■□□ 2.81
TMEM248-207ENST00000607045 SHPRHQ149N8 1683 aa32.61■■■□□ 2.81
TMEM248-207ENST00000607045 PTCH1Q13635 1447 aa32.6■■■□□ 2.81
TMEM248-207ENST00000607045 NALCNQ8IZF0 1738 aa32.59■■■□□ 2.81
TMEM248-207ENST00000607045 SETD1AO15047 1707 aaKnown RBP32.58■■■□□ 2.81
TMEM248-207ENST00000607045 STK26Q9P289 416 aa32.57■■■□□ 2.8
TMEM248-207ENST00000607045 CCDC144AA2RUR9 1427 aa32.57■■■□□ 2.8
TMEM248-207ENST00000607045 NHSL1Q5SYE7 1610 aa32.55■■■□□ 2.8
TMEM248-207ENST00000607045 AFF2P51816 1311 aa32.54■■■□□ 2.8
TMEM248-207ENST00000607045 SPATA31E1Q6ZUB1 1445 aa32.54■■■□□ 2.8
TMEM248-207ENST00000607045 PPLO60437 1756 aa32.54■■■□□ 2.8
TMEM248-207ENST00000607045 PNPLA6Q8IY17 1366 aa32.54■■■□□ 2.8
TMEM248-207ENST00000607045 RXRBP28702 533 aa32.53■■■□□ 2.8
TMEM248-207ENST00000607045 TMEM132EQ6IEE7 984 aa32.53■■■□□ 2.8
TMEM248-207ENST00000607045 WAPLQ7Z5K2 1190 aa32.53■■■□□ 2.8
TMEM248-207ENST00000607045 C8orf37Q96NL8 207 aa32.51■■■□□ 2.79
TMEM248-207ENST00000607045 PRAG1Q86YV5 1406 aa32.51■■■□□ 2.79
TMEM248-207ENST00000607045 SOS2Q07890 1332 aaPredicted RBP32.5■■■□□ 2.79
TMEM248-207ENST00000607045 ANKRD30BQ9BXX2 1392 aa32.47■■■□□ 2.79
TMEM248-207ENST00000607045 ADAMTS2O95450 1211 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms