RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 BRD4O60885 1362 aaPredicted RBP21.35■■□□□ 1.01
CTSA-214ENST00000606788 SCAF11Q99590 1463 aaKnown RBP21.34■■□□□ 1.01
CTSA-214ENST00000606788 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
CTSA-214ENST00000606788 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
CTSA-214ENST00000606788 FRMPD1Q5SYB0 1578 aa21.34■■□□□ 1.01
CTSA-214ENST00000606788 IDI1Q13907 227 aa21.33■■□□□ 1.01
CTSA-214ENST00000606788 EFCAB6Q5THR3 1501 aa21.33■■□□□ 1.01
CTSA-214ENST00000606788 VWDEQ8N2E2 1590 aa21.33■■□□□ 1
CTSA-214ENST00000606788 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
CTSA-214ENST00000606788 ABCA6Q8N139 1617 aa21.32■■□□□ 1
CTSA-214ENST00000606788 TSPOAP1O95153 1857 aa21.31■■□□□ 1
CTSA-214ENST00000606788 HECW2Q9P2P5 1572 aa21.3■■□□□ 1
CTSA-214ENST00000606788 MLH3Q9UHC1 1453 aa21.3■■□□□ 1
CTSA-214ENST00000606788 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
CTSA-214ENST00000606788 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
CTSA-214ENST00000606788 RNF17Q9BXT8 1623 aaKnown RBP21.29■■□□□ 1
CTSA-214ENST00000606788 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
CTSA-214ENST00000606788 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
CTSA-214ENST00000606788 PPP2R1AP30153 589 aa21.28■■□□□ 1
CTSA-214ENST00000606788 MROH2AA6NES4 1674 aa21.28■■□□□ 1
CTSA-214ENST00000606788 AMER1Q5JTC6 1135 aaPredicted RBP21.28■■□□□ 1
CTSA-214ENST00000606788 CDCA8Q53HL2 280 aa21.27■■□□□ 1
CTSA-214ENST00000606788 EIF3AQ14152 1382 aaKnown RBP21.27■■□□□ 1
CTSA-214ENST00000606788 CARD14Q9BXL6 1004 aa21.26■□□□□ 0.99
CTSA-214ENST00000606788 CENPJQ9HC77 1338 aaPredicted RBP21.26■□□□□ 0.99
CTSA-214ENST00000606788 LRPPRCP42704 1394 aaKnown RBP21.25■□□□□ 0.99
CTSA-214ENST00000606788 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
CTSA-214ENST00000606788 PPP4R2Q9NY27 417 aa21.24■□□□□ 0.99
CTSA-214ENST00000606788 KIF1BO60333 1816 aa21.24■□□□□ 0.99
CTSA-214ENST00000606788 ABCC3O15438 1527 aa21.23■□□□□ 0.99
CTSA-214ENST00000606788 PLIN1O60240 522 aa21.22■□□□□ 0.99
CTSA-214ENST00000606788 NEO1Q92859 1461 aa21.22■□□□□ 0.99
CTSA-214ENST00000606788 SMG6Q86US8 1419 aaKnown RBP21.22■□□□□ 0.99
CTSA-214ENST00000606788 C14orf93Q9H972 538 aaKnown RBP21.21■□□□□ 0.99
CTSA-214ENST00000606788 CABP2Q9NPB3 220 aa21.21■□□□□ 0.99
CTSA-214ENST00000606788 STAC3Q96MF2 364 aa21.21■□□□□ 0.99
CTSA-214ENST00000606788 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
CTSA-214ENST00000606788 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
CTSA-214ENST00000606788 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
CTSA-214ENST00000606788 MAP3K4Q9Y6R4 1608 aa21.21■□□□□ 0.99
CTSA-214ENST00000606788 IQGAP1P46940 1657 aa21.2■□□□□ 0.98
CTSA-214ENST00000606788 LAMC1P11047 1609 aa21.2■□□□□ 0.98
CTSA-214ENST00000606788 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
CTSA-214ENST00000606788 CFAP74Q9C0B2 1584 aa21.18■□□□□ 0.98
CTSA-214ENST00000606788 RBM19Q9Y4C8 960 aaKnown RBP21.18■□□□□ 0.98
CTSA-214ENST00000606788 ERVK-7P63135 1459 aa21.18■□□□□ 0.98
CTSA-214ENST00000606788 MINK1Q8N4C8 1332 aaPredicted RBP21.17■□□□□ 0.98
CTSA-214ENST00000606788 VGFO15240 615 aaPredicted RBP21.17■□□□□ 0.98
CTSA-214ENST00000606788 NEUROD2Q15784 382 aa21.15■□□□□ 0.98
CTSA-214ENST00000606788 CCDC136Q96JN2 1154 aa21.15■□□□□ 0.98
CTSA-214ENST00000606788 RCAN3Q9UKA8 241 aa21.15■□□□□ 0.98
CTSA-214ENST00000606788 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
CTSA-214ENST00000606788 SRPK2P78362 688 aaKnown RBP21.14■□□□□ 0.97
CTSA-214ENST00000606788 ADGRB3O60242 1522 aa21.14■□□□□ 0.97
CTSA-214ENST00000606788 MYOM2P54296 1465 aa21.14■□□□□ 0.97
CTSA-214ENST00000606788 LMTK2Q8IWU2 1503 aa21.13■□□□□ 0.97
CTSA-214ENST00000606788 EXOC6Q8TAG9 804 aa21.12■□□□□ 0.97
CTSA-214ENST00000606788 PIK3C2GO75747 1445 aa21.12■□□□□ 0.97
CTSA-214ENST00000606788 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
CTSA-214ENST00000606788 APAF1O14727 1248 aa21.1■□□□□ 0.97
CTSA-214ENST00000606788 POGKQ9P215 609 aa21.1■□□□□ 0.97
CTSA-214ENST00000606788 CAMSAP1Q5T5Y3 1602 aa21.1■□□□□ 0.97
CTSA-214ENST00000606788 RICTORQ6R327 1708 aa21.1■□□□□ 0.97
CTSA-214ENST00000606788 SYNMO15061 1565 aa21.09■□□□□ 0.97
CTSA-214ENST00000606788 NSD3Q9BZ95 1437 aa21.09■□□□□ 0.97
CTSA-214ENST00000606788 PRAM1Q96QH2 718 aa21.09■□□□□ 0.97
CTSA-214ENST00000606788 RRP7AQ9Y3A4 280 aaKnown RBP21.09■□□□□ 0.97
CTSA-214ENST00000606788 ASXL1Q8IXJ9 1541 aa21.08■□□□□ 0.97
CTSA-214ENST00000606788 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.97
CTSA-214ENST00000606788 RRP1P56182 461 aaKnown RBP21.08■□□□□ 0.96
CTSA-214ENST00000606788 SLC52A1Q9NWF4 448 aa21.07■□□□□ 0.96
CTSA-214ENST00000606788 PLEKHH1Q9ULM0 1364 aa21.07■□□□□ 0.96
CTSA-214ENST00000606788 RPGRIP1LQ68CZ1 1315 aa21.05■□□□□ 0.96
CTSA-214ENST00000606788 WAPLQ7Z5K2 1190 aa21.05■□□□□ 0.96
CTSA-214ENST00000606788 KDM5AP29375 1690 aaKnown RBP21.05■□□□□ 0.96
CTSA-214ENST00000606788 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
CTSA-214ENST00000606788 MYOM1P52179 1685 aa21.03■□□□□ 0.96
CTSA-214ENST00000606788 DIP2BQ9P265 1576 aa21.03■□□□□ 0.96
CTSA-214ENST00000606788 NRXN1Q9ULB1 1477 aa21.03■□□□□ 0.96
CTSA-214ENST00000606788 SPINK5Q9NQ38 1064 aaPredicted RBP21.03■□□□□ 0.96
CTSA-214ENST00000606788 SKAP1Q86WV1 359 aa21.03■□□□□ 0.96
CTSA-214ENST00000606788 EVC2Q86UK5 1308 aa21.02■□□□□ 0.96
CTSA-214ENST00000606788 IFT172Q9UG01 1749 aa21.02■□□□□ 0.96
CTSA-214ENST00000606788 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
CTSA-214ENST00000606788 FBLN1P23142 703 aa21.01■□□□□ 0.95
CTSA-214ENST00000606788 C20orf194Q5TEA3 1177 aa21.01■□□□□ 0.95
CTSA-214ENST00000606788 PPLO60437 1756 aa21.01■□□□□ 0.95
CTSA-214ENST00000606788 ADGRB1O14514 1584 aa21■□□□□ 0.95
CTSA-214ENST00000606788 MTHFSP49914 203 aa21■□□□□ 0.95
CTSA-214ENST00000606788 MYO5BQ9ULV0 1848 aa20.99■□□□□ 0.95
CTSA-214ENST00000606788 CEBPAP49715 358 aaPredicted RBP20.99■□□□□ 0.95
CTSA-214ENST00000606788 ERICH6BQ5W0A0 696 aa20.99■□□□□ 0.95
CTSA-214ENST00000606788 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
CTSA-214ENST00000606788 BLMP54132 1417 aaPredicted RBP20.98■□□□□ 0.95
CTSA-214ENST00000606788 RNF123Q5XPI4 1314 aa20.98■□□□□ 0.95
CTSA-214ENST00000606788 KIAA1210Q9ULL0 1709 aa20.97■□□□□ 0.95
CTSA-214ENST00000606788 PDE3BQ13370 1112 aa20.97■□□□□ 0.95
CTSA-214ENST00000606788 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
CTSA-214ENST00000606788 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.97■□□□□ 0.95
CTSA-214ENST00000606788 PIK3C2BO00750 1634 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms