RNA–Protein interactions for RNA: ENST00000605852.1

FOCAD-217, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-217ENST00000605852 CD46P15529 392 aa9.25□□□□□ -0.93
FOCAD-217ENST00000605852 RSBN1LQ6PCB5 846 aaPredicted RBP9.25□□□□□ -0.93
FOCAD-217ENST00000605852 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
FOCAD-217ENST00000605852 SLC39A7Q92504 469 aa9.25□□□□□ -0.93
FOCAD-217ENST00000605852 CDCA7LQ96GN5 454 aa9.25□□□□□ -0.93
FOCAD-217ENST00000605852 POM121CA8CG34 1229 aa9.24□□□□□ -0.93
FOCAD-217ENST00000605852 AP1G2O75843 785 aa9.24□□□□□ -0.93
FOCAD-217ENST00000605852 SULF1Q8IWU6 871 aa9.24□□□□□ -0.93
FOCAD-217ENST00000605852 TBC1D2BQ9UPU7 963 aa9.24□□□□□ -0.93
FOCAD-217ENST00000605852 RCCD1A6NED2 376 aa9.23□□□□□ -0.93
FOCAD-217ENST00000605852 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
FOCAD-217ENST00000605852 C7P10643 843 aa9.22□□□□□ -0.93
FOCAD-217ENST00000605852 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
FOCAD-217ENST00000605852 RGS22Q8NE09 1264 aa9.22□□□□□ -0.93
FOCAD-217ENST00000605852 DCBLD2Q96PD2 775 aa9.22□□□□□ -0.93
FOCAD-217ENST00000605852 POTEFA5A3E0 1075 aa9.21□□□□□ -0.94
FOCAD-217ENST00000605852 NUTM2BA6NNL0 878 aaPredicted RBP9.21□□□□□ -0.94
FOCAD-217ENST00000605852 NUTM2EB1AL46 878 aaPredicted RBP9.21□□□□□ -0.94
FOCAD-217ENST00000605852 LILRB3O75022 631 aa9.21□□□□□ -0.94
FOCAD-217ENST00000605852 GJA5P36382 358 aa9.21□□□□□ -0.94
FOCAD-217ENST00000605852 MFAP1P55081 439 aaKnown RBP9.21□□□□□ -0.94
FOCAD-217ENST00000605852 QPCTQ16769 361 aa9.21□□□□□ -0.94
FOCAD-217ENST00000605852 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
FOCAD-217ENST00000605852 NUTM2AQ8IVF1 878 aaPredicted RBP9.21□□□□□ -0.94
FOCAD-217ENST00000605852 ADAM33Q9BZ11 813 aa9.21□□□□□ -0.94
FOCAD-217ENST00000605852 DDX11L8A8MPP1 907 aa9.2□□□□□ -0.94
FOCAD-217ENST00000605852 PATL2C9JE40 543 aaKnown RBP9.2□□□□□ -0.94
FOCAD-217ENST00000605852 MTMR7Q9Y216 660 aa9.2□□□□□ -0.94
FOCAD-217ENST00000605852 USP17L8P0C7I0 530 aa9.19□□□□□ -0.94
FOCAD-217ENST00000605852 NDUFV2P19404 249 aa9.19□□□□□ -0.94
FOCAD-217ENST00000605852 RTL5Q5HYW3 569 aaPredicted RBP9.19□□□□□ -0.94
FOCAD-217ENST00000605852 EYA1Q99502 592 aa9.19□□□□□ -0.94
FOCAD-217ENST00000605852 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
FOCAD-217ENST00000605852 PCDHB15Q9Y5E8 787 aa9.19□□□□□ -0.94
FOCAD-217ENST00000605852 HDGFL1Q5TGJ6 251 aa9.18□□□□□ -0.94
FOCAD-217ENST00000605852 PBXIP1Q96AQ6 731 aa9.18□□□□□ -0.94
FOCAD-217ENST00000605852 FAM198AQ9UFP1 575 aa9.17□□□□□ -0.94
FOCAD-217ENST00000605852 NDUFB9Q9Y6M9 179 aa9.17□□□□□ -0.94
FOCAD-217ENST00000605852 GABBR2O75899 941 aa9.15□□□□□ -0.94
FOCAD-217ENST00000605852 RFX1P22670 979 aa9.15□□□□□ -0.94
FOCAD-217ENST00000605852 DNAJB2P25686 324 aa9.15□□□□□ -0.94
FOCAD-217ENST00000605852 WASHC4Q2M389 1173 aa9.15□□□□□ -0.94
FOCAD-217ENST00000605852 PRPF38BQ5VTL8 546 aaKnown RBP9.15□□□□□ -0.94
FOCAD-217ENST00000605852 CABLES1Q8TDN4 633 aa9.15□□□□□ -0.94
FOCAD-217ENST00000605852 METRNQ9UJH8 293 aa9.15□□□□□ -0.94
FOCAD-217ENST00000605852 CSB-PGBD3P0DP91 1061 aa9.14□□□□□ -0.95
FOCAD-217ENST00000605852 NUDT18Q6ZVK8 323 aa9.14□□□□□ -0.95
FOCAD-217ENST00000605852 BRD1O95696 1058 aa9.13□□□□□ -0.95
FOCAD-217ENST00000605852 NUDT7P0C024 238 aa9.13□□□□□ -0.95
FOCAD-217ENST00000605852 KCNA1Q09470 495 aa9.13□□□□□ -0.95
FOCAD-217ENST00000605852 GJD4Q96KN9 370 aaPredicted RBP9.13□□□□□ -0.95
FOCAD-217ENST00000605852 ZBTB3Q9H5J0 574 aa9.13□□□□□ -0.95
FOCAD-217ENST00000605852 USTQ9Y2C2 406 aa9.13□□□□□ -0.95
FOCAD-217ENST00000605852 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.12□□□□□ -0.95
FOCAD-217ENST00000605852 KDM4AO75164 1064 aa9.12□□□□□ -0.95
FOCAD-217ENST00000605852 RDH13Q8NBN7 331 aa9.12□□□□□ -0.95
FOCAD-217ENST00000605852 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
FOCAD-217ENST00000605852 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
FOCAD-217ENST00000605852 NBPF26B4DH59 902 aa9.11□□□□□ -0.95
FOCAD-217ENST00000605852 COL9A1P20849 921 aa9.11□□□□□ -0.95
FOCAD-217ENST00000605852 FOXD4L5Q5VV16 416 aaPredicted RBP9.11□□□□□ -0.95
FOCAD-217ENST00000605852 ADAMTS19Q8TE59 1207 aa9.11□□□□□ -0.95
FOCAD-217ENST00000605852 FOXD4L4Q8WXT5 416 aaPredicted RBP9.11□□□□□ -0.95
FOCAD-217ENST00000605852 USP46P62068 366 aa9.1□□□□□ -0.95
FOCAD-217ENST00000605852 ARSIQ5FYB1 569 aa9.1□□□□□ -0.95
FOCAD-217ENST00000605852 CFAP70Q5T0N1 1121 aa9.1□□□□□ -0.95
FOCAD-217ENST00000605852 TATDN2Q93075 761 aa9.1□□□□□ -0.95
FOCAD-217ENST00000605852 PNMA3Q9UL41 463 aa9.1□□□□□ -0.95
FOCAD-217ENST00000605852 FDX1P10109 184 aa9.09□□□□□ -0.95
FOCAD-217ENST00000605852 RBM25P49756 843 aaKnown RBP9.09□□□□□ -0.95
FOCAD-217ENST00000605852 PACS2Q86VP3 889 aa9.09□□□□□ -0.95
FOCAD-217ENST00000605852 KHSRPQ92945 711 aaKnown RBP eCLIP9.09□□□□□ -0.95
FOCAD-217ENST00000605852 PPP1R12CQ9BZL4 782 aa9.09□□□□□ -0.95
FOCAD-217ENST00000605852 SRPK2P78362 688 aaKnown RBP9.08□□□□□ -0.96
FOCAD-217ENST00000605852 CTDSPL2Q05D32 466 aa9.08□□□□□ -0.96
FOCAD-217ENST00000605852 DOK7Q18PE1 504 aa9.08□□□□□ -0.96
FOCAD-217ENST00000605852 RSPH4AQ5TD94 716 aa9.08□□□□□ -0.96
FOCAD-217ENST00000605852 PPP1R3GB7ZBB8 358 aa9.07□□□□□ -0.96
FOCAD-217ENST00000605852 C3orf80F5H4A9 247 aa9.07□□□□□ -0.96
FOCAD-217ENST00000605852 VAC14Q08AM6 782 aa9.07□□□□□ -0.96
FOCAD-217ENST00000605852 PPP4R3BQ5MIZ7 849 aa9.07□□□□□ -0.96
FOCAD-217ENST00000605852 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
FOCAD-217ENST00000605852 RIMBP2O15034 1052 aa9.06□□□□□ -0.96
FOCAD-217ENST00000605852 HOXA2O43364 376 aa9.06□□□□□ -0.96
FOCAD-217ENST00000605852 GCGRP47871 477 aa9.06□□□□□ -0.96
FOCAD-217ENST00000605852 HELBQ8NG08 1087 aaPredicted RBP9.06□□□□□ -0.96
FOCAD-217ENST00000605852 TRIM34Q9BYJ4 488 aa9.06□□□□□ -0.96
FOCAD-217ENST00000605852 BCL2L12Q9HB09 334 aa9.06□□□□□ -0.96
FOCAD-217ENST00000605852 PALM3A6NDB9 673 aaPredicted RBP9.05□□□□□ -0.96
FOCAD-217ENST00000605852 TRIM6-TRIM34B2RNG4 842 aa9.05□□□□□ -0.96
FOCAD-217ENST00000605852 PTPREP23469 700 aa9.05□□□□□ -0.96
FOCAD-217ENST00000605852 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
FOCAD-217ENST00000605852 ALG2Q9H553 416 aa9.05□□□□□ -0.96
FOCAD-217ENST00000605852 TSC1Q92574 1164 aa9.04□□□□□ -0.96
FOCAD-217ENST00000605852 ZNF428Q96B54 188 aa9.04□□□□□ -0.96
FOCAD-217ENST00000605852 ZSWIM6Q9HCJ5 1215 aa9.04□□□□□ -0.96
FOCAD-217ENST00000605852 PCDHGC3Q9UN70 934 aa9.04□□□□□ -0.96
FOCAD-217ENST00000605852 PSDA5PKW4 1024 aaPredicted RBP9.03□□□□□ -0.96
FOCAD-217ENST00000605852 GPR37L1O60883 481 aa9.03□□□□□ -0.96
FOCAD-217ENST00000605852 MTMR2Q13614 643 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms