RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 PER1O15534 1290 aaPredicted RBP26.99■■□□□ 1.91
MMP28-201ENST00000605424 NPATQ14207 1427 aa26.99■■□□□ 1.91
MMP28-201ENST00000605424 EIF3AQ14152 1382 aaKnown RBP26.99■■□□□ 1.91
MMP28-201ENST00000605424 UGGT1Q9NYU2 1555 aa26.99■■□□□ 1.91
MMP28-201ENST00000605424 ABCC3O15438 1527 aa26.98■■□□□ 1.91
MMP28-201ENST00000605424 CDCA8Q53HL2 280 aa26.98■■□□□ 1.91
MMP28-201ENST00000605424 TMC1Q8TDI8 760 aa26.98■■□□□ 1.91
MMP28-201ENST00000605424 ADGRB3O60242 1522 aa26.97■■□□□ 1.91
MMP28-201ENST00000605424 NRXN1Q9ULB1 1477 aa26.97■■□□□ 1.91
MMP28-201ENST00000605424 GGT6Q6P531 493 aa26.96■■□□□ 1.91
MMP28-201ENST00000605424 PARD3Q8TEW0 1356 aa26.96■■□□□ 1.91
MMP28-201ENST00000605424 PNISRQ8TF01 805 aaKnown RBP26.96■■□□□ 1.91
MMP28-201ENST00000605424 YEATS2Q9ULM3 1422 aa26.94■■□□□ 1.9
MMP28-201ENST00000605424 MROH2AA6NES4 1674 aa26.93■■□□□ 1.9
MMP28-201ENST00000605424 CAMSAP1Q5T5Y3 1602 aa26.92■■□□□ 1.9
MMP28-201ENST00000605424 ZC3H13Q5T200 1668 aaKnown RBP26.92■■□□□ 1.9
MMP28-201ENST00000605424 ZMYM4Q5VZL5 1548 aa26.91■■□□□ 1.9
MMP28-201ENST00000605424 ARHGAP31Q2M1Z3 1444 aa26.9■■□□□ 1.9
MMP28-201ENST00000605424 RPGRIP1LQ68CZ1 1315 aa26.9■■□□□ 1.9
MMP28-201ENST00000605424 NLRP13Q86W25 1043 aa26.9■■□□□ 1.9
MMP28-201ENST00000605424 LRPPRCP42704 1394 aaKnown RBP26.89■■□□□ 1.9
MMP28-201ENST00000605424 NOS1P29475 1434 aa26.89■■□□□ 1.9
MMP28-201ENST00000605424 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.9
MMP28-201ENST00000605424 PANK3Q9H999 370 aa26.88■■□□□ 1.89
MMP28-201ENST00000605424 ADGRF5Q8IZF2 1346 aa26.88■■□□□ 1.89
MMP28-201ENST00000605424 SETBP1Q9Y6X0 1596 aa26.87■■□□□ 1.89
MMP28-201ENST00000605424 SYNMO15061 1565 aa26.86■■□□□ 1.89
MMP28-201ENST00000605424 CFAP70Q5T0N1 1121 aa26.84■■□□□ 1.89
MMP28-201ENST00000605424 ERICH6BQ5W0A0 696 aa26.84■■□□□ 1.89
MMP28-201ENST00000605424 PPLO60437 1756 aa26.84■■□□□ 1.89
MMP28-201ENST00000605424 PIK3C2BO00750 1634 aa26.83■■□□□ 1.89
MMP28-201ENST00000605424 MYO3AQ8NEV4 1616 aa26.81■■□□□ 1.88
MMP28-201ENST00000605424 INSRP06213 1382 aa26.8■■□□□ 1.88
MMP28-201ENST00000605424 SBNO2Q9Y2G9 1366 aa26.8■■□□□ 1.88
MMP28-201ENST00000605424 PIK3C2GO75747 1445 aa26.8■■□□□ 1.88
MMP28-201ENST00000605424 SMG6Q86US8 1419 aaKnown RBP26.79■■□□□ 1.88
MMP28-201ENST00000605424 SIGLEC1Q9BZZ2 1709 aa26.78■■□□□ 1.88
MMP28-201ENST00000605424 CFAP65Q6ZU64 1925 aaKnown RBP26.78■■□□□ 1.88
MMP28-201ENST00000605424 KDM5AP29375 1690 aaKnown RBP26.78■■□□□ 1.88
MMP28-201ENST00000605424 CHGAP10645 457 aaKnown RBP26.78■■□□□ 1.88
MMP28-201ENST00000605424 C14orf93Q9H972 538 aaKnown RBP26.77■■□□□ 1.88
MMP28-201ENST00000605424 BCANQ96GW7 911 aa26.76■■□□□ 1.87
MMP28-201ENST00000605424 REREQ9P2R6 1566 aa26.76■■□□□ 1.87
MMP28-201ENST00000605424 KNSTRNQ9Y448 316 aa26.75■■□□□ 1.87
MMP28-201ENST00000605424 ARHGEF40Q8TER5 1519 aa26.75■■□□□ 1.87
MMP28-201ENST00000605424 NPC1L1Q9UHC9 1359 aa26.74■■□□□ 1.87
MMP28-201ENST00000605424 SLC52A1Q9NWF4 448 aa26.74■■□□□ 1.87
MMP28-201ENST00000605424 CC2D1BQ5T0F9 858 aaKnown RBP26.73■■□□□ 1.87
MMP28-201ENST00000605424 MYOM1P52179 1685 aa26.73■■□□□ 1.87
MMP28-201ENST00000605424 ERVK-7P63135 1459 aa26.71■■□□□ 1.87
MMP28-201ENST00000605424 PPP6R1Q9UPN7 881 aa26.71■■□□□ 1.87
MMP28-201ENST00000605424 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
MMP28-201ENST00000605424 VGFO15240 615 aaPredicted RBP26.71■■□□□ 1.87
MMP28-201ENST00000605424 ASXL1Q8IXJ9 1541 aa26.7■■□□□ 1.86
MMP28-201ENST00000605424 AGLP35573 1532 aa26.69■■□□□ 1.86
MMP28-201ENST00000605424 ADGRB1O14514 1584 aa26.69■■□□□ 1.86
MMP28-201ENST00000605424 ZFYVE9O95405 1425 aa26.69■■□□□ 1.86
MMP28-201ENST00000605424 NEXMIFQ5QGS0 1516 aa26.68■■□□□ 1.86
MMP28-201ENST00000605424 AMER1Q5JTC6 1135 aaPredicted RBP26.68■■□□□ 1.86
MMP28-201ENST00000605424 CENPJQ9HC77 1338 aaPredicted RBP26.67■■□□□ 1.86
MMP28-201ENST00000605424 PREX1Q8TCU6 1659 aa26.66■■□□□ 1.86
MMP28-201ENST00000605424 IDI1Q13907 227 aa26.63■■□□□ 1.85
MMP28-201ENST00000605424 PDE3BQ13370 1112 aa26.61■■□□□ 1.85
MMP28-201ENST00000605424 BLMP54132 1417 aaPredicted RBP26.6■■□□□ 1.85
MMP28-201ENST00000605424 RNF123Q5XPI4 1314 aa26.59■■□□□ 1.85
MMP28-201ENST00000605424 PUS7Q96PZ0 661 aaKnown RBP26.59■■□□□ 1.85
MMP28-201ENST00000605424 QRICH2Q9H0J4 1663 aa26.58■■□□□ 1.85
MMP28-201ENST00000605424 PPP2R1AP30153 589 aa26.58■■□□□ 1.85
MMP28-201ENST00000605424 PPP4R2Q9NY27 417 aa26.58■■□□□ 1.85
MMP28-201ENST00000605424 TMEM131LA2VDJ0 1609 aa26.58■■□□□ 1.85
MMP28-201ENST00000605424 TRAK1Q9UPV9 953 aa26.57■■□□□ 1.84
MMP28-201ENST00000605424 MLECQ14165 292 aa26.56■■□□□ 1.84
MMP28-201ENST00000605424 IRX6P78412 446 aaPredicted RBP26.54■■□□□ 1.84
MMP28-201ENST00000605424 TSHZ2Q9NRE2 1034 aa26.53■■□□□ 1.84
MMP28-201ENST00000605424 TMEM132EQ6IEE7 984 aa26.52■■□□□ 1.84
MMP28-201ENST00000605424 ARHGEF28Q8N1W1 1705 aaKnown RBP26.5■■□□□ 1.83
MMP28-201ENST00000605424 MYO5BQ9ULV0 1848 aa26.48■■□□□ 1.83
MMP28-201ENST00000605424 CARD14Q9BXL6 1004 aa26.47■■□□□ 1.83
MMP28-201ENST00000605424 EVC2Q86UK5 1308 aa26.46■■□□□ 1.83
MMP28-201ENST00000605424 WDR43Q15061 677 aaKnown RBP eCLIP26.45■■□□□ 1.83
MMP28-201ENST00000605424 SPATA31D1Q6ZQQ2 1576 aa26.45■■□□□ 1.82
MMP28-201ENST00000605424 CLTCQ00610 1675 aaKnown RBP26.45■■□□□ 1.82
MMP28-201ENST00000605424 FBXO31Q5XUX0 539 aaPredicted RBP26.44■■□□□ 1.82
MMP28-201ENST00000605424 ADAMTS8Q9UP79 889 aa26.43■■□□□ 1.82
MMP28-201ENST00000605424 NUTM2DQ5VT03 806 aaPredicted RBP26.43■■□□□ 1.82
MMP28-201ENST00000605424 USP32Q8NFA0 1604 aa26.42■■□□□ 1.82
MMP28-201ENST00000605424 TULP4Q9NRJ4 1543 aa26.39■■□□□ 1.81
MMP28-201ENST00000605424 NINLQ9Y2I6 1382 aa26.38■■□□□ 1.81
MMP28-201ENST00000605424 STAG3Q9UJ98 1225 aa26.37■■□□□ 1.81
MMP28-201ENST00000605424 NSD3Q9BZ95 1437 aa26.37■■□□□ 1.81
MMP28-201ENST00000605424 SENP3-EIF4A1A0A087X0R7 540 aa26.37■■□□□ 1.81
MMP28-201ENST00000605424 SLC12A5Q9H2X9 1139 aa26.36■■□□□ 1.81
MMP28-201ENST00000605424 RCAN3Q9UKA8 241 aa26.35■■□□□ 1.81
MMP28-201ENST00000605424 ALKQ9UM73 1620 aa26.34■■□□□ 1.81
MMP28-201ENST00000605424 A2ML1A8K2U0 1454 aa26.34■■□□□ 1.81
MMP28-201ENST00000605424 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
MMP28-201ENST00000605424 SALL2Q9Y467 1007 aaPredicted RBP26.34■■□□□ 1.81
MMP28-201ENST00000605424 PTPRMP28827 1452 aa26.34■■□□□ 1.81
MMP28-201ENST00000605424 POLR3AO14802 1390 aaPredicted RBP26.34■■□□□ 1.81
MMP28-201ENST00000605424 ANKRD36BQ8N2N9 1353 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms