RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 PREX1Q8TCU6 1659 aa26.62■■□□□ 1.85
TUBB4B-202ENST00000604929 PIK3C2BO00750 1634 aa26.61■■□□□ 1.85
TUBB4B-202ENST00000604929 MYOM2P54296 1465 aa26.61■■□□□ 1.85
TUBB4B-202ENST00000604929 RPGRIP1LQ68CZ1 1315 aa26.6■■□□□ 1.85
TUBB4B-202ENST00000604929 POLR1AO95602 1720 aaPredicted RBP26.6■■□□□ 1.85
TUBB4B-202ENST00000604929 SENP3Q9H4L4 574 aaPredicted RBP26.6■■□□□ 1.85
TUBB4B-202ENST00000604929 LAMC1P11047 1609 aa26.59■■□□□ 1.85
TUBB4B-202ENST00000604929 IFT172Q9UG01 1749 aa26.59■■□□□ 1.85
TUBB4B-202ENST00000604929 TESK2Q96S53 571 aa26.58■■□□□ 1.85
TUBB4B-202ENST00000604929 ZMYM3Q14202 1370 aa26.58■■□□□ 1.85
TUBB4B-202ENST00000604929 ERVK-7P63135 1459 aa26.58■■□□□ 1.85
TUBB4B-202ENST00000604929 STAG3Q9UJ98 1225 aa26.58■■□□□ 1.85
TUBB4B-202ENST00000604929 VGFO15240 615 aaPredicted RBP26.55■■□□□ 1.84
TUBB4B-202ENST00000604929 NRXN1Q9ULB1 1477 aa26.54■■□□□ 1.84
TUBB4B-202ENST00000604929 PPLO60437 1756 aa26.53■■□□□ 1.84
TUBB4B-202ENST00000604929 CNGB1Q14028 1251 aaPredicted RBP26.53■■□□□ 1.84
TUBB4B-202ENST00000604929 C14orf93Q9H972 538 aaKnown RBP26.52■■□□□ 1.84
TUBB4B-202ENST00000604929 SCAF11Q99590 1463 aaKnown RBP26.52■■□□□ 1.84
TUBB4B-202ENST00000604929 TMEM132EQ6IEE7 984 aa26.51■■□□□ 1.83
TUBB4B-202ENST00000604929 CENPBP07199 599 aaPredicted RBP26.51■■□□□ 1.83
TUBB4B-202ENST00000604929 TMF1P82094 1093 aa26.5■■□□□ 1.83
TUBB4B-202ENST00000604929 DISP3Q9P2K9 1392 aa26.5■■□□□ 1.83
TUBB4B-202ENST00000604929 CCER2I3L3R5 266 aa26.49■■□□□ 1.83
TUBB4B-202ENST00000604929 PIK3C2GO75747 1445 aa26.49■■□□□ 1.83
TUBB4B-202ENST00000604929 KIAA1210Q9ULL0 1709 aa26.49■■□□□ 1.83
TUBB4B-202ENST00000604929 MYO5BQ9ULV0 1848 aa26.49■■□□□ 1.83
TUBB4B-202ENST00000604929 TMEM131LA2VDJ0 1609 aa26.48■■□□□ 1.83
TUBB4B-202ENST00000604929 NEXMIFQ5QGS0 1516 aa26.48■■□□□ 1.83
TUBB4B-202ENST00000604929 IQGAP1P46940 1657 aa26.47■■□□□ 1.83
TUBB4B-202ENST00000604929 PLPPR3Q6T4P5 718 aa26.46■■□□□ 1.83
TUBB4B-202ENST00000604929 PRKRIP1Q9H875 184 aaPredicted RBP26.46■■□□□ 1.83
TUBB4B-202ENST00000604929 SPATA31D1Q6ZQQ2 1576 aa26.45■■□□□ 1.83
TUBB4B-202ENST00000604929 CEBPAP49715 358 aaPredicted RBP26.45■■□□□ 1.82
TUBB4B-202ENST00000604929 TRAK1Q9UPV9 953 aa26.45■■□□□ 1.82
TUBB4B-202ENST00000604929 EIF3AQ14152 1382 aaKnown RBP26.42■■□□□ 1.82
TUBB4B-202ENST00000604929 ZFYVE9O95405 1425 aa26.37■■□□□ 1.81
TUBB4B-202ENST00000604929 A2ML1A8K2U0 1454 aa26.37■■□□□ 1.81
TUBB4B-202ENST00000604929 TNRQ92752 1358 aa26.36■■□□□ 1.81
TUBB4B-202ENST00000604929 SETBP1Q9Y6X0 1596 aa26.35■■□□□ 1.81
TUBB4B-202ENST00000604929 CCDC184Q52MB2 194 aa26.35■■□□□ 1.81
TUBB4B-202ENST00000604929 ADGRB1O14514 1584 aa26.34■■□□□ 1.81
TUBB4B-202ENST00000604929 STK26Q9P289 416 aa26.34■■□□□ 1.81
TUBB4B-202ENST00000604929 PANK3Q9H999 370 aa26.33■■□□□ 1.81
TUBB4B-202ENST00000604929 CENPJQ9HC77 1338 aaPredicted RBP26.33■■□□□ 1.8
TUBB4B-202ENST00000604929 CDCA8Q53HL2 280 aa26.31■■□□□ 1.8
TUBB4B-202ENST00000604929 RIMS2Q9UQ26 1411 aa26.3■■□□□ 1.8
TUBB4B-202ENST00000604929 PER1O15534 1290 aaPredicted RBP26.28■■□□□ 1.8
TUBB4B-202ENST00000604929 SLC24A1O60721 1099 aa26.26■■□□□ 1.79
TUBB4B-202ENST00000604929 SAFB2Q14151 953 aaKnown RBP eCLIP26.26■■□□□ 1.79
TUBB4B-202ENST00000604929 MRS2Q9HD23 443 aa26.26■■□□□ 1.79
TUBB4B-202ENST00000604929 FER1L4A9Z1Z3 1794 aa26.23■■□□□ 1.79
TUBB4B-202ENST00000604929 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.22■■□□□ 1.79
TUBB4B-202ENST00000604929 BCANQ96GW7 911 aa26.22■■□□□ 1.79
TUBB4B-202ENST00000604929 HDGFP51858 240 aaKnown RBP26.21■■□□□ 1.79
TUBB4B-202ENST00000604929 C3P01024 1663 aa26.21■■□□□ 1.79
TUBB4B-202ENST00000604929 CC2D1BQ5T0F9 858 aaKnown RBP26.21■■□□□ 1.79
TUBB4B-202ENST00000604929 ALKQ9UM73 1620 aa26.2■■□□□ 1.79
TUBB4B-202ENST00000604929 ASXL1Q8IXJ9 1541 aa26.19■■□□□ 1.78
TUBB4B-202ENST00000604929 MYO3AQ8NEV4 1616 aa26.19■■□□□ 1.78
TUBB4B-202ENST00000604929 FAM9BQ8IZU0 186 aa26.19■■□□□ 1.78
TUBB4B-202ENST00000604929 SBNO2Q9Y2G9 1366 aa26.19■■□□□ 1.78
TUBB4B-202ENST00000604929 TMEM2Q9UHN6 1383 aa26.17■■□□□ 1.78
TUBB4B-202ENST00000604929 YTHDC2Q9H6S0 1430 aaKnown RBP26.17■■□□□ 1.78
TUBB4B-202ENST00000604929 PRAM1Q96QH2 718 aa26.16■■□□□ 1.78
TUBB4B-202ENST00000604929 RALBP1Q15311 655 aa26.15■■□□□ 1.78
TUBB4B-202ENST00000604929 POGKQ9P215 609 aa26.15■■□□□ 1.78
TUBB4B-202ENST00000604929 QRICH2Q9H0J4 1663 aa26.15■■□□□ 1.78
TUBB4B-202ENST00000604929 UBR1Q8IWV7 1749 aa26.15■■□□□ 1.78
TUBB4B-202ENST00000604929 KNSTRNQ9Y448 316 aa26.15■■□□□ 1.78
TUBB4B-202ENST00000604929 KTN1Q86UP2 1357 aaKnown RBP26.14■■□□□ 1.78
TUBB4B-202ENST00000604929 NLRP1Q9C000 1473 aa26.14■■□□□ 1.78
TUBB4B-202ENST00000604929 KDM5AP29375 1690 aaKnown RBP26.14■■□□□ 1.78
TUBB4B-202ENST00000604929 LTKP29376 864 aa26.14■■□□□ 1.77
TUBB4B-202ENST00000604929 ARHGEF28Q8N1W1 1705 aaKnown RBP26.13■■□□□ 1.77
TUBB4B-202ENST00000604929 TMC1Q8TDI8 760 aa26.13■■□□□ 1.77
TUBB4B-202ENST00000604929 PTPRMP28827 1452 aa26.12■■□□□ 1.77
TUBB4B-202ENST00000604929 TXNDC2Q86VQ3 553 aa26.12■■□□□ 1.77
TUBB4B-202ENST00000604929 EVC2Q86UK5 1308 aa26.11■■□□□ 1.77
TUBB4B-202ENST00000604929 MINK1Q8N4C8 1332 aaPredicted RBP26.1■■□□□ 1.77
TUBB4B-202ENST00000604929 SLC12A5Q9H2X9 1139 aa26.1■■□□□ 1.77
TUBB4B-202ENST00000604929 MYBBP1AQ9BQG0 1328 aaKnown RBP26.09■■□□□ 1.77
TUBB4B-202ENST00000604929 WAPLQ7Z5K2 1190 aa26.09■■□□□ 1.77
TUBB4B-202ENST00000604929 CABP2Q9NPB3 220 aa26.09■■□□□ 1.77
TUBB4B-202ENST00000604929 METP08581 1390 aa26.09■■□□□ 1.77
TUBB4B-202ENST00000604929 HNRNPUQ00839 825 aaKnown RBP eCLIP26.08■■□□□ 1.77
TUBB4B-202ENST00000604929 MYOM1P52179 1685 aa26.07■■□□□ 1.76
TUBB4B-202ENST00000604929 PARD3Q8TEW0 1356 aa26.07■■□□□ 1.76
TUBB4B-202ENST00000604929 EID1Q9Y6B2 187 aa26.07■■□□□ 1.76
TUBB4B-202ENST00000604929 SCAF1Q9H7N4 1312 aaKnown RBP26.06■■□□□ 1.76
TUBB4B-202ENST00000604929 THEMISQ8N1K5 641 aaPredicted RBP26.06■■□□□ 1.76
TUBB4B-202ENST00000604929 CARD14Q9BXL6 1004 aa26.06■■□□□ 1.76
TUBB4B-202ENST00000604929 RIMS1Q86UR5 1692 aaKnown RBP26.06■■□□□ 1.76
TUBB4B-202ENST00000604929 NRXN3Q9Y4C0 1643 aa26.05■■□□□ 1.76
TUBB4B-202ENST00000604929 AMER1Q5JTC6 1135 aaPredicted RBP26.05■■□□□ 1.76
TUBB4B-202ENST00000604929 SRPK2P78362 688 aaKnown RBP26.04■■□□□ 1.76
TUBB4B-202ENST00000604929 LRPPRCP42704 1394 aaKnown RBP26.03■■□□□ 1.76
TUBB4B-202ENST00000604929 SLC26A8Q96RN1 970 aa26.03■■□□□ 1.76
TUBB4B-202ENST00000604929 GTF3C3Q9Y5Q9 886 aa26.03■■□□□ 1.76
TUBB4B-202ENST00000604929 TULP4Q9NRJ4 1543 aa26.02■■□□□ 1.76
TUBB4B-202ENST00000604929 SETD1AO15047 1707 aaKnown RBP26.01■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms