RNA–Protein interactions for RNA: ENST00000604896.5

CPA1-209, Transcript of carboxypeptidase A1, humanhuman

TSL 3

Gene CPA1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-209ENST00000604896 TMEM94Q12767 1356 aa22.41■■□□□ 1.18
CPA1-209ENST00000604896 XIRP1Q702N8 1843 aaKnown RBP22.41■■□□□ 1.18
CPA1-209ENST00000604896 MYO5BQ9ULV0 1848 aa22.41■■□□□ 1.18
CPA1-209ENST00000604896 E9PCH4 1651 aa22.41■■□□□ 1.18
CPA1-209ENST00000604896 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
CPA1-209ENST00000604896 TMEM131LA2VDJ0 1609 aa22.39■■□□□ 1.18
CPA1-209ENST00000604896 ZFYVE9O95405 1425 aa22.39■■□□□ 1.17
CPA1-209ENST00000604896 NUP155O75694 1391 aa22.38■■□□□ 1.17
CPA1-209ENST00000604896 BCANQ96GW7 911 aa22.38■■□□□ 1.17
CPA1-209ENST00000604896 PROSER2Q86WR7 435 aaPredicted RBP22.37■■□□□ 1.17
CPA1-209ENST00000604896 RIMS2Q9UQ26 1411 aa22.37■■□□□ 1.17
CPA1-209ENST00000604896 HDGFP51858 240 aaKnown RBP22.36■■□□□ 1.17
CPA1-209ENST00000604896 PLEKHG1Q9ULL1 1385 aa22.36■■□□□ 1.17
CPA1-209ENST00000604896 NKTRP30414 1462 aaKnown RBP22.35■■□□□ 1.17
CPA1-209ENST00000604896 CHGAP10645 457 aaKnown RBP22.35■■□□□ 1.17
CPA1-209ENST00000604896 PPP1R15AO75807 674 aaPredicted RBP22.34■■□□□ 1.17
CPA1-209ENST00000604896 NWD1Q149M9 1564 aa22.33■■□□□ 1.16
CPA1-209ENST00000604896 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.31■■□□□ 1.16
CPA1-209ENST00000604896 RRBP1Q9P2E9 1410 aaKnown RBP22.31■■□□□ 1.16
CPA1-209ENST00000604896 MSH6P52701 1360 aa22.3■■□□□ 1.16
CPA1-209ENST00000604896 RBM33Q96EV2 1170 aaKnown RBP22.3■■□□□ 1.16
CPA1-209ENST00000604896 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.16
CPA1-209ENST00000604896 NUTM2DQ5VT03 806 aaPredicted RBP22.27■■□□□ 1.16
CPA1-209ENST00000604896 RGS17Q9UGC6 210 aaPredicted RBP22.27■■□□□ 1.16
CPA1-209ENST00000604896 TBX22Q9Y458 520 aa22.27■■□□□ 1.16
CPA1-209ENST00000604896 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
CPA1-209ENST00000604896 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
CPA1-209ENST00000604896 SPHKAPQ2M3C7 1700 aa22.23■■□□□ 1.15
CPA1-209ENST00000604896 SLAIN2Q9P270 581 aa22.22■■□□□ 1.15
CPA1-209ENST00000604896 NAIPQ13075 1403 aa22.22■■□□□ 1.15
CPA1-209ENST00000604896 DIP2AQ14689 1571 aa22.21■■□□□ 1.15
CPA1-209ENST00000604896 NCOA3Q9Y6Q9 1424 aa22.2■■□□□ 1.14
CPA1-209ENST00000604896 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
CPA1-209ENST00000604896 JCADQ9P266 1359 aa22.16■■□□□ 1.14
CPA1-209ENST00000604896 TRPM2O94759 1503 aa22.16■■□□□ 1.14
CPA1-209ENST00000604896 ZNF326Q5BKZ1 582 aaKnown RBP22.15■■□□□ 1.14
CPA1-209ENST00000604896 C14orf37Q86TY3 774 aa22.15■■□□□ 1.14
CPA1-209ENST00000604896 POTEAQ6S8J7 498 aa22.14■■□□□ 1.13
CPA1-209ENST00000604896 CLTCL1P53675 1640 aa22.13■■□□□ 1.13
CPA1-209ENST00000604896 PHLPP1O60346 1717 aa22.13■■□□□ 1.13
CPA1-209ENST00000604896 HFM1A2PYH4 1435 aa22.13■■□□□ 1.13
CPA1-209ENST00000604896 CADPS2Q86UW7 1296 aa22.12■■□□□ 1.13
CPA1-209ENST00000604896 TRIM52Q96A61 297 aa22.12■■□□□ 1.13
CPA1-209ENST00000604896 PTPRUQ92729 1446 aa22.12■■□□□ 1.13
CPA1-209ENST00000604896 SETBP1Q9Y6X0 1596 aa22.12■■□□□ 1.13
CPA1-209ENST00000604896 NRXN3Q9Y4C0 1643 aa22.11■■□□□ 1.13
CPA1-209ENST00000604896 AMOTL2Q9Y2J4 779 aa22.11■■□□□ 1.13
CPA1-209ENST00000604896 C19orf44Q9H6X5 657 aa22.1■■□□□ 1.13
CPA1-209ENST00000604896 ATF3P18847 181 aa22.09■■□□□ 1.13
CPA1-209ENST00000604896 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.08■■□□□ 1.12
CPA1-209ENST00000604896 KIF1BO60333 1816 aa22.08■■□□□ 1.12
CPA1-209ENST00000604896 NEXMIFQ5QGS0 1516 aa22.07■■□□□ 1.12
CPA1-209ENST00000604896 COL16A1Q07092 1604 aaPredicted RBP22.07■■□□□ 1.12
CPA1-209ENST00000604896 SPATA31A6Q5VVP1 1343 aa22.06■■□□□ 1.12
CPA1-209ENST00000604896 SLC4A1APQ9BWU0 796 aaKnown RBP22.05■■□□□ 1.12
CPA1-209ENST00000604896 XRN1Q8IZH2 1706 aaKnown RBP22.05■■□□□ 1.12
CPA1-209ENST00000604896 METP08581 1390 aa22.04■■□□□ 1.12
CPA1-209ENST00000604896 AHDC1Q5TGY3 1603 aaPredicted RBP22.03■■□□□ 1.12
CPA1-209ENST00000604896 DCCP43146 1447 aa22.01■■□□□ 1.11
CPA1-209ENST00000604896 MEX3CQ5U5Q3 659 aaKnown RBP22■■□□□ 1.11
CPA1-209ENST00000604896 LRP6O75581 1613 aa21.98■■□□□ 1.11
CPA1-209ENST00000604896 VGFO15240 615 aaPredicted RBP21.98■■□□□ 1.11
CPA1-209ENST00000604896 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
CPA1-209ENST00000604896 ZNF772Q68DY9 489 aaPredicted RBP21.97■■□□□ 1.11
CPA1-209ENST00000604896 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
CPA1-209ENST00000604896 RPGRIP1LQ68CZ1 1315 aa21.95■■□□□ 1.1
CPA1-209ENST00000604896 FOXD1Q16676 465 aa21.94■■□□□ 1.1
CPA1-209ENST00000604896 ASXL1Q8IXJ9 1541 aa21.92■■□□□ 1.1
CPA1-209ENST00000604896 MST1RQ04912 1400 aa21.92■■□□□ 1.1
CPA1-209ENST00000604896 ADGRL3Q9HAR2 1447 aa21.92■■□□□ 1.1
CPA1-209ENST00000604896 SETD1AO15047 1707 aaKnown RBP21.92■■□□□ 1.1
CPA1-209ENST00000604896 PPLO60437 1756 aa21.91■■□□□ 1.1
CPA1-209ENST00000604896 SETD5Q9C0A6 1442 aa21.89■■□□□ 1.1
CPA1-209ENST00000604896 NALCNQ8IZF0 1738 aa21.89■■□□□ 1.1
CPA1-209ENST00000604896 MPHOSPH9Q99550 1183 aa21.89■■□□□ 1.09
CPA1-209ENST00000604896 CCDC144AA2RUR9 1427 aa21.88■■□□□ 1.09
CPA1-209ENST00000604896 PTCH1Q13635 1447 aa21.88■■□□□ 1.09
CPA1-209ENST00000604896 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
CPA1-209ENST00000604896 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
CPA1-209ENST00000604896 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
CPA1-209ENST00000604896 LRRC59Q96AG4 307 aaKnown RBP21.86■■□□□ 1.09
CPA1-209ENST00000604896 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
CPA1-209ENST00000604896 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
CPA1-209ENST00000604896 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
CPA1-209ENST00000604896 RXRBP28702 533 aa21.84■■□□□ 1.09
CPA1-209ENST00000604896 RGL3Q3MIN7 710 aa21.83■■□□□ 1.09
CPA1-209ENST00000604896 SPATA31E1Q6ZUB1 1445 aa21.82■■□□□ 1.08
CPA1-209ENST00000604896 ADGRF5Q8IZF2 1346 aa21.81■■□□□ 1.08
CPA1-209ENST00000604896 AFF2P51816 1311 aa21.8■■□□□ 1.08
CPA1-209ENST00000604896 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
CPA1-209ENST00000604896 C1orf167Q5SNV9 1468 aa21.8■■□□□ 1.08
CPA1-209ENST00000604896 CDK12Q9NYV4 1490 aaPredicted RBP21.8■■□□□ 1.08
CPA1-209ENST00000604896 UPF1Q92900 1129 aaKnown RBP eCLIP21.8■■□□□ 1.08
CPA1-209ENST00000604896 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
CPA1-209ENST00000604896 DDX17Q92841 729 aaKnown RBP21.79■■□□□ 1.08
CPA1-209ENST00000604896 IFT172Q9UG01 1749 aa21.78■■□□□ 1.08
CPA1-209ENST00000604896 ANKRD30BQ9BXX2 1392 aa21.78■■□□□ 1.08
CPA1-209ENST00000604896 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
CPA1-209ENST00000604896 ORAI2Q96SN7 254 aa21.74■■□□□ 1.07
CPA1-209ENST00000604896 STK26Q9P289 416 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms