RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PIK3C2GO75747 1445 aa17.28■□□□□ 0.36
NEDD8-MDP1-203ENST00000604306 ZMYM3Q14202 1370 aa17.27■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 CARD11Q9BXL7 1154 aa17.26■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 ESF1Q9H501 851 aaKnown RBP17.26■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 UBR1Q8IWV7 1749 aa17.24■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 ADAMTSL3P82987 1691 aa17.24■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 NLRP1Q9C000 1473 aa17.24■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 IDI1Q13907 227 aa17.22■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 A2ML1A8K2U0 1454 aa17.21■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
NEDD8-MDP1-203ENST00000604306 ADGRB1O14514 1584 aa17.2■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 TNRQ92752 1358 aa17.19■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 SLC24A1O60721 1099 aa17.19■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 ZNF142P52746 1687 aaPredicted RBP17.16■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 RIMS1Q86UR5 1692 aaKnown RBP17.16■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 ARHGEF28Q8N1W1 1705 aaKnown RBP17.16■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 MLECQ14165 292 aa17.16■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 SETD1BQ9UPS6 1966 aaKnown RBP17.16■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 SBNO2Q9Y2G9 1366 aa17.15■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 NBPF1Q3BBV0 1214 aa17.15■□□□□ 0.34
NEDD8-MDP1-203ENST00000604306 CHGAP10645 457 aaKnown RBP17.14■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 HIRIP3Q9BW71 556 aaPredicted RBP17.14■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 C14orf93Q9H972 538 aaKnown RBP17.14■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 KIF7Q2M1P5 1343 aa17.14■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 QRICH2Q9H0J4 1663 aa17.13■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 ST20-MTHFSA0A0A6YYL1 179 aa17.12■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 SLIT1O75093 1534 aa17.11■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.1■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 HDGFP51858 240 aaKnown RBP17.09■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 TESK2Q96S53 571 aa17.09■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
NEDD8-MDP1-203ENST00000604306 ARHGAP23Q9P227 1491 aa17.08■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 STAG3Q9UJ98 1225 aa17.08■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 CFAP70Q5T0N1 1121 aa17.07■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 MIER1Q8N108 512 aa17.07■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 CEP170BQ9Y4F5 1589 aaPredicted RBP17.06■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 TMF1P82094 1093 aa17.06■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 CDCA8Q53HL2 280 aa17.06■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 MYOM1P52179 1685 aa17.06■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 TMEM2Q9UHN6 1383 aa17.05■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 ANP32CO43423 234 aa17.02■□□□□ 0.32
NEDD8-MDP1-203ENST00000604306 CCER2I3L3R5 266 aa17.01■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 KTN1Q86UP2 1357 aaKnown RBP17.01■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 PTPRMP28827 1452 aa16.99■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 YTHDC2Q9H6S0 1430 aaKnown RBP16.99■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 CPS1P31327 1500 aa16.99■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 TECPR2O15040 1411 aa16.98■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 MED14O60244 1454 aa16.97■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 LRPPRCP42704 1394 aaKnown RBP16.96■□□□□ 0.31
NEDD8-MDP1-203ENST00000604306 THEMISQ8N1K5 641 aaPredicted RBP16.95■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 ABCC11Q96J66 1382 aa16.94■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 USP32Q8NFA0 1604 aa16.93■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 FAM135BQ49AJ0 1406 aa16.93■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 ADAMTS13Q76LX8 1427 aa16.93■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 NINLQ9Y2I6 1382 aa16.91■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 EID1Q9Y6B2 187 aa16.91■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 ADGRB2O60241 1585 aa16.9■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
NEDD8-MDP1-203ENST00000604306 TMEM132EQ6IEE7 984 aa16.89■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 PRKRIP1Q9H875 184 aaPredicted RBP16.89■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 PIK3R4Q99570 1358 aa16.89■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 EVC2Q86UK5 1308 aa16.88■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 PTCH1Q13635 1447 aa16.86■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 PER1O15534 1290 aaPredicted RBP16.85■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 RALBP1Q15311 655 aa16.84■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 TXNDC2Q86VQ3 553 aa16.84■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 METP08581 1390 aa16.84■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
NEDD8-MDP1-203ENST00000604306 LTKP29376 864 aa16.83■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 PARD3Q8TEW0 1356 aa16.83■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 ANKRD26Q9UPS8 1709 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms