RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SF3A1Q15459 793 aaKnown RBP10.62□□□□□ -0.71
CSMD1-216ENST00000602557 CENPQQ7L2Z9 268 aaPredicted RBP10.62□□□□□ -0.71
CSMD1-216ENST00000602557 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
CSMD1-216ENST00000602557 BCL2L13Q9BXK5 485 aa10.61□□□□□ -0.71
CSMD1-216ENST00000602557 L3MBTL2Q969R5 705 aa10.61□□□□□ -0.71
CSMD1-216ENST00000602557 CGNQ9P2M7 1197 aaKnown RBP10.61□□□□□ -0.71
CSMD1-216ENST00000602557 TMX4Q9H1E5 349 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-216ENST00000602557 BBXQ8WY36 941 aaPredicted RBP10.61□□□□□ -0.71
CSMD1-216ENST00000602557 CCDC70Q6NSX1 233 aa10.61□□□□□ -0.71
CSMD1-216ENST00000602557 LMOD3Q0VAK6 560 aa10.61□□□□□ -0.71
CSMD1-216ENST00000602557 FHOD3Q2V2M9 1422 aa10.61□□□□□ -0.71
CSMD1-216ENST00000602557 CCDC18Q5T9S5 1454 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 RILPL2Q969X0 211 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 AK7Q96M32 723 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 TSPYL1Q9H0U9 437 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 DIAPH3Q9NSV4 1193 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 MSH5O43196 834 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 PDE3BQ13370 1112 aa10.6□□□□□ -0.71
CSMD1-216ENST00000602557 TPD52L1Q16890 204 aaPredicted RBP10.6□□□□□ -0.71
CSMD1-216ENST00000602557 GPATCH11Q8N954 259 aa10.59□□□□□ -0.71
CSMD1-216ENST00000602557 CHMP5Q9NZZ3 219 aa10.59□□□□□ -0.71
CSMD1-216ENST00000602557 HDAC5Q9UQL6 1122 aa10.59□□□□□ -0.71
CSMD1-216ENST00000602557 MYBBP1AQ9BQG0 1328 aaKnown RBP10.59□□□□□ -0.71
CSMD1-216ENST00000602557 TNNT1P13805 278 aa10.59□□□□□ -0.71
CSMD1-216ENST00000602557 AMPHP49418 695 aa10.59□□□□□ -0.71
CSMD1-216ENST00000602557 IBSPP21815 317 aaPredicted RBP10.58□□□□□ -0.72
CSMD1-216ENST00000602557 ANKRD45Q5TZF3 282 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 MROH2BQ7Z745 1585 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 LEKR1Q6ZMV7 388 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 TAF3Q5VWG9 929 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 MEX3CQ5U5Q3 659 aaKnown RBP10.58□□□□□ -0.72
CSMD1-216ENST00000602557 NGDNQ8NEJ9 315 aaKnown RBP10.58□□□□□ -0.72
CSMD1-216ENST00000602557 NUTM2FA1L443 756 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 CCDC191Q8NCU4 936 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 RUFY1Q96T51 708 aa10.58□□□□□ -0.72
CSMD1-216ENST00000602557 TRAK2O60296 914 aa10.57□□□□□ -0.72
CSMD1-216ENST00000602557 MARCH6O60337 910 aa10.57□□□□□ -0.72
CSMD1-216ENST00000602557 CBX1P83916 185 aa10.57□□□□□ -0.72
CSMD1-216ENST00000602557 CEP89Q96ST8 783 aa10.57□□□□□ -0.72
CSMD1-216ENST00000602557 CAVIN1Q6NZI2 390 aaKnown RBP10.57□□□□□ -0.72
CSMD1-216ENST00000602557 CCDC173Q0VFZ6 552 aa10.57□□□□□ -0.72
CSMD1-216ENST00000602557 G3V3G9 751 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 DCAF8Q5TAQ9 597 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 CCDC144AA2RUR9 1427 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 TSR1Q2NL82 804 aaKnown RBP10.56□□□□□ -0.72
CSMD1-216ENST00000602557 DEF6Q9H4E7 631 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 PANK3Q9H999 370 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 ACBD3Q9H3P7 528 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 KIF3BO15066 747 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 ATP6V1DQ9Y5K8 247 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 USP47Q96K76 1375 aa10.56□□□□□ -0.72
CSMD1-216ENST00000602557 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
CSMD1-216ENST00000602557 HNRNPMP52272 730 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSMD1-216ENST00000602557 FAM184AQ8NB25 1140 aa10.55□□□□□ -0.72
CSMD1-216ENST00000602557 CGNL1Q0VF96 1302 aa10.55□□□□□ -0.72
CSMD1-216ENST00000602557 FOSBP53539 338 aa10.55□□□□□ -0.72
CSMD1-216ENST00000602557 PLCD3Q8N3E9 789 aa10.55□□□□□ -0.72
CSMD1-216ENST00000602557 ZFP91Q96JP5 570 aaPredicted RBP10.55□□□□□ -0.72
CSMD1-216ENST00000602557 SPC24Q8NBT2 197 aa10.55□□□□□ -0.72
CSMD1-216ENST00000602557 ELL2O00472 640 aaPredicted RBP10.55□□□□□ -0.72
CSMD1-216ENST00000602557 TOP2AP11388 1531 aaKnown RBP10.55□□□□□ -0.72
CSMD1-216ENST00000602557 GTF2E1P29083 439 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-216ENST00000602557 ST20-MTHFSA0A0A6YYL1 179 aa10.54□□□□□ -0.72
CSMD1-216ENST00000602557 TPM1P09493 284 aa10.54□□□□□ -0.72
CSMD1-216ENST00000602557 TRAK1Q9UPV9 953 aa10.54□□□□□ -0.72
CSMD1-216ENST00000602557 EFCAB2Q5VUJ9 269 aa10.54□□□□□ -0.72
CSMD1-216ENST00000602557 TTLL5Q6EMB2 1281 aa10.54□□□□□ -0.72
CSMD1-216ENST00000602557 WASHC2CQ9Y4E1 1318 aa10.54□□□□□ -0.72
CSMD1-216ENST00000602557 RAPGEF2Q9Y4G8 1499 aa10.54□□□□□ -0.72
CSMD1-216ENST00000602557 IPO4Q8TEX9 1081 aaKnown RBP10.53□□□□□ -0.72
CSMD1-216ENST00000602557 ESPNB1AK53 854 aa10.53□□□□□ -0.72
CSMD1-216ENST00000602557 AKAP17AQ02040 695 aaKnown RBP10.53□□□□□ -0.72
CSMD1-216ENST00000602557 ZKSCAN2Q63HK3 967 aa10.53□□□□□ -0.72
CSMD1-216ENST00000602557 HMGN5P82970 282 aaKnown RBP10.53□□□□□ -0.72
CSMD1-216ENST00000602557 COG6Q9Y2V7 657 aa10.53□□□□□ -0.72
CSMD1-216ENST00000602557 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.72
CSMD1-216ENST00000602557 TDRD9Q8NDG6 1382 aaKnown RBP10.52□□□□□ -0.72
CSMD1-216ENST00000602557 CENPHQ9H3R5 247 aa10.52□□□□□ -0.72
CSMD1-216ENST00000602557 GRPEL1Q9HAV7 217 aa10.52□□□□□ -0.73
CSMD1-216ENST00000602557 EID1Q9Y6B2 187 aa10.52□□□□□ -0.73
CSMD1-216ENST00000602557 PAXIP1Q6ZW49 1069 aaPredicted RBP10.52□□□□□ -0.73
CSMD1-216ENST00000602557 TSPY26PQ9H489 355 aa10.52□□□□□ -0.73
CSMD1-216ENST00000602557 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.73
CSMD1-216ENST00000602557 BICD2Q8TD16 824 aa10.51□□□□□ -0.73
CSMD1-216ENST00000602557 REC8O95072 547 aa10.51□□□□□ -0.73
CSMD1-216ENST00000602557 CAGE1Q8TC20 777 aa10.51□□□□□ -0.73
CSMD1-216ENST00000602557 KIAA0754O94854 1291 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 C22orf23Q9BZE7 217 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 PDILTQ8N807 584 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 WWC1Q8IX03 1113 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 GIMAP7Q8NHV1 300 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 NECTIN2Q92692 538 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 C9orf78Q9NZ63 289 aaPredicted RBP10.5□□□□□ -0.73
CSMD1-216ENST00000602557 PDCL2Q8N4E4 241 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 TCEAL9Q9UHQ7 104 aa10.5□□□□□ -0.73
CSMD1-216ENST00000602557 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
CSMD1-216ENST00000602557 NGEFQ8N5V2 710 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms