RNA–Protein interactions for RNA: ENST00000602550.5

HCG18-245, Transcript of HLA complex group 18, humanhuman

TSL 4 BASIC

Gene HCG18, Length 559 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-245ENST00000602550 DAPK1P53355 1430 aa22.31■■□□□ 1.16
HCG18-245ENST00000602550 ADGRB3O60242 1522 aa22.29■■□□□ 1.16
HCG18-245ENST00000602550 APLP2Q06481 763 aa22.27■■□□□ 1.16
HCG18-245ENST00000602550 CHIC2Q9UKJ5 165 aa22.27■■□□□ 1.16
HCG18-245ENST00000602550 CHD2O14647 1828 aaKnown RBP22.25■■□□□ 1.15
HCG18-245ENST00000602550 NCOA3Q9Y6Q9 1424 aa22.24■■□□□ 1.15
HCG18-245ENST00000602550 SETD1AO15047 1707 aaKnown RBP22.24■■□□□ 1.15
HCG18-245ENST00000602550 PPP1R15AO75807 674 aaPredicted RBP22.24■■□□□ 1.15
HCG18-245ENST00000602550 SPATA31A6Q5VVP1 1343 aa22.24■■□□□ 1.15
HCG18-245ENST00000602550 PLEKHG1Q9ULL1 1385 aa22.24■■□□□ 1.15
HCG18-245ENST00000602550 ZNF772Q68DY9 489 aaPredicted RBP22.23■■□□□ 1.15
HCG18-245ENST00000602550 LOC105371045A0A1W2PR82 267 aa22.22■■□□□ 1.15
HCG18-245ENST00000602550 TBX22Q9Y458 520 aa22.22■■□□□ 1.15
HCG18-245ENST00000602550 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
HCG18-245ENST00000602550 RPRD2Q5VT52 1461 aaKnown RBP22.22■■□□□ 1.15
HCG18-245ENST00000602550 MEX3CQ5U5Q3 659 aaKnown RBP22.21■■□□□ 1.15
HCG18-245ENST00000602550 C14orf37Q86TY3 774 aa22.21■■□□□ 1.15
HCG18-245ENST00000602550 ZFYVE9O95405 1425 aa22.2■■□□□ 1.14
HCG18-245ENST00000602550 COL16A1Q07092 1604 aaPredicted RBP22.2■■□□□ 1.14
HCG18-245ENST00000602550 CADPS2Q86UW7 1296 aa22.19■■□□□ 1.14
HCG18-245ENST00000602550 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.14
HCG18-245ENST00000602550 RIMS2Q9UQ26 1411 aa22.19■■□□□ 1.14
HCG18-245ENST00000602550 UPF1Q92900 1129 aaKnown RBP eCLIP22.18■■□□□ 1.14
HCG18-245ENST00000602550 C19orf44Q9H6X5 657 aa22.17■■□□□ 1.14
HCG18-245ENST00000602550 MYO5BQ9ULV0 1848 aa22.17■■□□□ 1.14
HCG18-245ENST00000602550 ATF3P18847 181 aa22.16■■□□□ 1.14
HCG18-245ENST00000602550 TRIM52Q96A61 297 aa22.14■■□□□ 1.13
HCG18-245ENST00000602550 ADGRL2O95490 1459 aa22.14■■□□□ 1.13
HCG18-245ENST00000602550 LRP6O75581 1613 aa22.13■■□□□ 1.13
HCG18-245ENST00000602550 GCC2Q8IWJ2 1684 aa22.13■■□□□ 1.13
HCG18-245ENST00000602550 TMEM131LA2VDJ0 1609 aa22.13■■□□□ 1.13
HCG18-245ENST00000602550 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
HCG18-245ENST00000602550 RXRBP28702 533 aa22.12■■□□□ 1.13
HCG18-245ENST00000602550 AHDC1Q5TGY3 1603 aaPredicted RBP22.12■■□□□ 1.13
HCG18-245ENST00000602550 ANKRD50Q9ULJ7 1429 aa22.12■■□□□ 1.13
HCG18-245ENST00000602550 CHGAP10645 457 aaKnown RBP22.11■■□□□ 1.13
HCG18-245ENST00000602550 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.11■■□□□ 1.13
HCG18-245ENST00000602550 SHPRHQ149N8 1683 aa22.11■■□□□ 1.13
HCG18-245ENST00000602550 ADAMTS13Q76LX8 1427 aa22.08■■□□□ 1.13
HCG18-245ENST00000602550 DIP2AQ14689 1571 aa22.08■■□□□ 1.12
HCG18-245ENST00000602550 CDK12Q9NYV4 1490 aaPredicted RBP22.05■■□□□ 1.12
HCG18-245ENST00000602550 FAM50AQ14320 339 aaKnown RBP22.05■■□□□ 1.12
HCG18-245ENST00000602550 NUTM2DQ5VT03 806 aaPredicted RBP22.05■■□□□ 1.12
HCG18-245ENST00000602550 BRINP3Q76B58 766 aa22.05■■□□□ 1.12
HCG18-245ENST00000602550 AMOTL2Q9Y2J4 779 aa22.05■■□□□ 1.12
HCG18-245ENST00000602550 NUTM2BA6NNL0 878 aaPredicted RBP22.04■■□□□ 1.12
HCG18-245ENST00000602550 NUTM2EB1AL46 878 aaPredicted RBP22.04■■□□□ 1.12
HCG18-245ENST00000602550 NUTM2AQ8IVF1 878 aaPredicted RBP22.04■■□□□ 1.12
HCG18-245ENST00000602550 TRPM2O94759 1503 aa22.01■■□□□ 1.11
HCG18-245ENST00000602550 DCCP43146 1447 aa22.01■■□□□ 1.11
HCG18-245ENST00000602550 AFF2P51816 1311 aa22■■□□□ 1.11
HCG18-245ENST00000602550 LRRC59Q96AG4 307 aaKnown RBP21.99■■□□□ 1.11
HCG18-245ENST00000602550 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
HCG18-245ENST00000602550 UNC13BO14795 1591 aa21.97■■□□□ 1.11
HCG18-245ENST00000602550 E9PCH4 1651 aa21.97■■□□□ 1.11
HCG18-245ENST00000602550 PTPRUQ92729 1446 aa21.96■■□□□ 1.11
HCG18-245ENST00000602550 ASXL1Q8IXJ9 1541 aa21.95■■□□□ 1.1
HCG18-245ENST00000602550 RBM6P78332 1123 aaKnown RBP21.94■■□□□ 1.1
HCG18-245ENST00000602550 QTRT2Q9H974 415 aaKnown RBP21.94■■□□□ 1.1
HCG18-245ENST00000602550 MST1RQ04912 1400 aa21.92■■□□□ 1.1
HCG18-245ENST00000602550 C8orf37Q96NL8 207 aa21.92■■□□□ 1.1
HCG18-245ENST00000602550 NHSL1Q5SYE7 1610 aa21.91■■□□□ 1.1
HCG18-245ENST00000602550 IQGAP3Q86VI3 1631 aa21.9■■□□□ 1.1
HCG18-245ENST00000602550 XRN1Q8IZH2 1706 aaKnown RBP21.89■■□□□ 1.09
HCG18-245ENST00000602550 NUP155O75694 1391 aa21.88■■□□□ 1.09
HCG18-245ENST00000602550 NGLY1Q96IV0 654 aa21.88■■□□□ 1.09
HCG18-245ENST00000602550 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
HCG18-245ENST00000602550 SETBP1Q9Y6X0 1596 aa21.87■■□□□ 1.09
HCG18-245ENST00000602550 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
HCG18-245ENST00000602550 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
HCG18-245ENST00000602550 RGS12O14924 1447 aa21.86■■□□□ 1.09
HCG18-245ENST00000602550 NRXN3Q9Y4C0 1643 aa21.84■■□□□ 1.09
HCG18-245ENST00000602550 ADGRL3Q9HAR2 1447 aa21.84■■□□□ 1.09
HCG18-245ENST00000602550 FOXD1Q16676 465 aa21.84■■□□□ 1.09
HCG18-245ENST00000602550 DDX17Q92841 729 aaKnown RBP21.83■■□□□ 1.09
HCG18-245ENST00000602550 METP08581 1390 aa21.83■■□□□ 1.08
HCG18-245ENST00000602550 ATAD2Q6PL18 1390 aa21.8■■□□□ 1.08
HCG18-245ENST00000602550 ADAMTS2O95450 1211 aa21.8■■□□□ 1.08
HCG18-245ENST00000602550 TRPC5Q9UL62 973 aaPredicted RBP21.78■■□□□ 1.08
HCG18-245ENST00000602550 USP21Q9UK80 565 aa21.77■■□□□ 1.08
HCG18-245ENST00000602550 SPHKAPQ2M3C7 1700 aa21.77■■□□□ 1.08
HCG18-245ENST00000602550 C1orf167Q5SNV9 1468 aa21.77■■□□□ 1.07
HCG18-245ENST00000602550 NALCNQ8IZF0 1738 aa21.75■■□□□ 1.07
HCG18-245ENST00000602550 SOS2Q07890 1332 aaPredicted RBP21.75■■□□□ 1.07
HCG18-245ENST00000602550 ZRANB1Q9UGI0 708 aa21.74■■□□□ 1.07
HCG18-245ENST00000602550 FNBP4Q8N3X1 1017 aaPredicted RBP21.73■■□□□ 1.07
HCG18-245ENST00000602550 LAMC1P11047 1609 aa21.73■■□□□ 1.07
HCG18-245ENST00000602550 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
HCG18-245ENST00000602550 SRCAPQ6ZRS2 3230 aa21.72■■□□□ 1.07
HCG18-245ENST00000602550 ITGAEP38570 1179 aa21.71■■□□□ 1.07
HCG18-245ENST00000602550 CCDC125Q86Z20 511 aa21.71■■□□□ 1.07
HCG18-245ENST00000602550 ORAI2Q96SN7 254 aa21.71■■□□□ 1.07
HCG18-245ENST00000602550 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.06
HCG18-245ENST00000602550 VGFO15240 615 aaPredicted RBP21.68■■□□□ 1.06
HCG18-245ENST00000602550 KIF1BO60333 1816 aa21.67■■□□□ 1.06
HCG18-245ENST00000602550 ATRNO75882 1429 aa21.67■■□□□ 1.06
HCG18-245ENST00000602550 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
HCG18-245ENST00000602550 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
HCG18-245ENST00000602550 COL22A1Q8NFW1 1626 aaPredicted RBP21.63■■□□□ 1.05
HCG18-245ENST00000602550 NPHP3Q7Z494 1330 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms