RNA–Protein interactions for RNA: ENST00000601853.5

FARP1-237, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-237ENST00000601853 UPF1Q92900 1129 aaKnown RBP eCLIP23.92■■□□□ 1.42
FARP1-237ENST00000601853 SPATA31A6Q5VVP1 1343 aa23.91■■□□□ 1.42
FARP1-237ENST00000601853 ZNF772Q68DY9 489 aaPredicted RBP23.9■■□□□ 1.42
FARP1-237ENST00000601853 NCOA3Q9Y6Q9 1424 aa23.9■■□□□ 1.42
FARP1-237ENST00000601853 ANKRD30AQ9BXX3 1397 aa23.9■■□□□ 1.42
FARP1-237ENST00000601853 PLEKHG1Q9ULL1 1385 aa23.9■■□□□ 1.42
FARP1-237ENST00000601853 COL16A1Q07092 1604 aaPredicted RBP23.89■■□□□ 1.42
FARP1-237ENST00000601853 PTPN23Q9H3S7 1636 aa23.89■■□□□ 1.42
FARP1-237ENST00000601853 HDGFP51858 240 aaKnown RBP23.89■■□□□ 1.41
FARP1-237ENST00000601853 TBX22Q9Y458 520 aa23.89■■□□□ 1.41
FARP1-237ENST00000601853 FGD6Q6ZV73 1430 aa23.89■■□□□ 1.41
FARP1-237ENST00000601853 CHD2O14647 1828 aaKnown RBP23.89■■□□□ 1.41
FARP1-237ENST00000601853 ZFYVE9O95405 1425 aa23.88■■□□□ 1.41
FARP1-237ENST00000601853 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
FARP1-237ENST00000601853 LRP6O75581 1613 aa23.86■■□□□ 1.41
FARP1-237ENST00000601853 MEX3CQ5U5Q3 659 aaKnown RBP23.85■■□□□ 1.41
FARP1-237ENST00000601853 PPP1R15AO75807 674 aaPredicted RBP23.83■■□□□ 1.41
FARP1-237ENST00000601853 CADPS2Q86UW7 1296 aa23.83■■□□□ 1.41
FARP1-237ENST00000601853 TRIM52Q96A61 297 aa23.83■■□□□ 1.41
FARP1-237ENST00000601853 C19orf44Q9H6X5 657 aa23.83■■□□□ 1.41
FARP1-237ENST00000601853 RIMS2Q9UQ26 1411 aa23.83■■□□□ 1.4
FARP1-237ENST00000601853 RPRD2Q5VT52 1461 aaKnown RBP23.82■■□□□ 1.4
FARP1-237ENST00000601853 LOC105371045A0A1W2PR82 267 aa23.82■■□□□ 1.4
FARP1-237ENST00000601853 C14orf37Q86TY3 774 aa23.81■■□□□ 1.4
FARP1-237ENST00000601853 RXRBP28702 533 aa23.8■■□□□ 1.4
FARP1-237ENST00000601853 ATF3P18847 181 aa23.79■■□□□ 1.4
FARP1-237ENST00000601853 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.79■■□□□ 1.4
FARP1-237ENST00000601853 AHDC1Q5TGY3 1603 aaPredicted RBP23.79■■□□□ 1.4
FARP1-237ENST00000601853 SHPRHQ149N8 1683 aa23.76■■□□□ 1.39
FARP1-237ENST00000601853 MYO5BQ9ULV0 1848 aa23.76■■□□□ 1.39
FARP1-237ENST00000601853 TMEM131LA2VDJ0 1609 aa23.76■■□□□ 1.39
FARP1-237ENST00000601853 PIK3R4Q99570 1358 aa23.76■■□□□ 1.39
FARP1-237ENST00000601853 APLP2Q06481 763 aa23.75■■□□□ 1.39
FARP1-237ENST00000601853 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.75■■□□□ 1.39
FARP1-237ENST00000601853 ADAMTS13Q76LX8 1427 aa23.75■■□□□ 1.39
FARP1-237ENST00000601853 ADGRL2O95490 1459 aa23.74■■□□□ 1.39
FARP1-237ENST00000601853 CDK12Q9NYV4 1490 aaPredicted RBP23.74■■□□□ 1.39
FARP1-237ENST00000601853 BRINP3Q76B58 766 aa23.73■■□□□ 1.39
FARP1-237ENST00000601853 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
FARP1-237ENST00000601853 ANKRD50Q9ULJ7 1429 aa23.71■■□□□ 1.39
FARP1-237ENST00000601853 NUTM2BA6NNL0 878 aaPredicted RBP23.7■■□□□ 1.38
FARP1-237ENST00000601853 NUTM2EB1AL46 878 aaPredicted RBP23.7■■□□□ 1.38
FARP1-237ENST00000601853 NUTM2AQ8IVF1 878 aaPredicted RBP23.7■■□□□ 1.38
FARP1-237ENST00000601853 CHGAP10645 457 aaKnown RBP23.69■■□□□ 1.38
FARP1-237ENST00000601853 NUTM2DQ5VT03 806 aaPredicted RBP23.69■■□□□ 1.38
FARP1-237ENST00000601853 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
FARP1-237ENST00000601853 DIP2AQ14689 1571 aa23.69■■□□□ 1.38
FARP1-237ENST00000601853 AFF2P51816 1311 aa23.67■■□□□ 1.38
FARP1-237ENST00000601853 SETD5Q9C0A6 1442 aa23.65■■□□□ 1.38
FARP1-237ENST00000601853 DCCP43146 1447 aa23.64■■□□□ 1.37
FARP1-237ENST00000601853 PTPRUQ92729 1446 aa23.64■■□□□ 1.37
FARP1-237ENST00000601853 LRRC59Q96AG4 307 aaKnown RBP23.63■■□□□ 1.37
FARP1-237ENST00000601853 QTRT2Q9H974 415 aaKnown RBP23.62■■□□□ 1.37
FARP1-237ENST00000601853 TRPM2O94759 1503 aa23.62■■□□□ 1.37
FARP1-237ENST00000601853 SRCAPQ6ZRS2 3230 aa23.62■■□□□ 1.37
FARP1-237ENST00000601853 RBM6P78332 1123 aaKnown RBP23.61■■□□□ 1.37
FARP1-237ENST00000601853 FAM50AQ14320 339 aaKnown RBP23.6■■□□□ 1.37
FARP1-237ENST00000601853 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
FARP1-237ENST00000601853 MST1RQ04912 1400 aa23.57■■□□□ 1.36
FARP1-237ENST00000601853 C8orf37Q96NL8 207 aa23.56■■□□□ 1.36
FARP1-237ENST00000601853 E9PCH4 1651 aa23.56■■□□□ 1.36
FARP1-237ENST00000601853 RGS12O14924 1447 aa23.55■■□□□ 1.36
FARP1-237ENST00000601853 UNC13BO14795 1591 aa23.55■■□□□ 1.36
FARP1-237ENST00000601853 NHSL1Q5SYE7 1610 aa23.54■■□□□ 1.36
FARP1-237ENST00000601853 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
FARP1-237ENST00000601853 XRN1Q8IZH2 1706 aaKnown RBP23.51■■□□□ 1.35
FARP1-237ENST00000601853 DDX17Q92841 729 aaKnown RBP23.51■■□□□ 1.35
FARP1-237ENST00000601853 NGLY1Q96IV0 654 aa23.5■■□□□ 1.35
FARP1-237ENST00000601853 SETBP1Q9Y6X0 1596 aa23.48■■□□□ 1.35
FARP1-237ENST00000601853 METP08581 1390 aa23.48■■□□□ 1.35
FARP1-237ENST00000601853 IQGAP3Q86VI3 1631 aa23.48■■□□□ 1.35
FARP1-237ENST00000601853 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
FARP1-237ENST00000601853 NUP155O75694 1391 aa23.46■■□□□ 1.35
FARP1-237ENST00000601853 ADGRL3Q9HAR2 1447 aa23.46■■□□□ 1.35
FARP1-237ENST00000601853 ROCK1Q13464 1354 aa23.45■■□□□ 1.34
FARP1-237ENST00000601853 ADAMTS2O95450 1211 aa23.45■■□□□ 1.34
FARP1-237ENST00000601853 ATAD2Q6PL18 1390 aa23.44■■□□□ 1.34
FARP1-237ENST00000601853 FOXD1Q16676 465 aa23.41■■□□□ 1.34
FARP1-237ENST00000601853 ZNF326Q5BKZ1 582 aaKnown RBP23.41■■□□□ 1.34
FARP1-237ENST00000601853 USP21Q9UK80 565 aa23.41■■□□□ 1.34
FARP1-237ENST00000601853 FNBP4Q8N3X1 1017 aaPredicted RBP23.4■■□□□ 1.34
FARP1-237ENST00000601853 TRPC5Q9UL62 973 aaPredicted RBP23.4■■□□□ 1.34
FARP1-237ENST00000601853 C1orf167Q5SNV9 1468 aa23.4■■□□□ 1.34
FARP1-237ENST00000601853 SOS2Q07890 1332 aaPredicted RBP23.39■■□□□ 1.34
FARP1-237ENST00000601853 ZRANB1Q9UGI0 708 aa23.39■■□□□ 1.33
FARP1-237ENST00000601853 LAMC1P11047 1609 aa23.37■■□□□ 1.33
FARP1-237ENST00000601853 ORAI2Q96SN7 254 aa23.36■■□□□ 1.33
FARP1-237ENST00000601853 NALCNQ8IZF0 1738 aa23.36■■□□□ 1.33
FARP1-237ENST00000601853 PTCH1Q13635 1447 aa23.35■■□□□ 1.33
FARP1-237ENST00000601853 CCDC125Q86Z20 511 aa23.35■■□□□ 1.33
FARP1-237ENST00000601853 ATRNO75882 1429 aa23.33■■□□□ 1.32
FARP1-237ENST00000601853 EP400Q96L91 3159 aa23.31■■□□□ 1.32
FARP1-237ENST00000601853 SPHKAPQ2M3C7 1700 aa23.3■■□□□ 1.32
FARP1-237ENST00000601853 NEXMIFQ5QGS0 1516 aa23.29■■□□□ 1.32
FARP1-237ENST00000601853 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.32
FARP1-237ENST00000601853 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
FARP1-237ENST00000601853 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
FARP1-237ENST00000601853 VGFO15240 615 aaPredicted RBP23.24■■□□□ 1.31
FARP1-237ENST00000601853 MYOM2P54296 1465 aa23.24■■□□□ 1.31
FARP1-237ENST00000601853 ITGAEP38570 1179 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms