RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 RIMS2Q9UQ26 1411 aa31.71■■■□□ 2.67
SNRPA-211ENST00000601545 LRRC7Q96NW7 1537 aa31.7■■■□□ 2.66
SNRPA-211ENST00000601545 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.68■■■□□ 2.66
SNRPA-211ENST00000601545 STRCP1A6NGW2 1772 aa31.68■■■□□ 2.66
SNRPA-211ENST00000601545 HFM1A2PYH4 1435 aa31.67■■■□□ 2.66
SNRPA-211ENST00000601545 KCNA6P17658 529 aa31.67■■■□□ 2.66
SNRPA-211ENST00000601545 TMEM131LA2VDJ0 1609 aa31.66■■■□□ 2.66
SNRPA-211ENST00000601545 ZFYVE9O95405 1425 aa31.66■■■□□ 2.66
SNRPA-211ENST00000601545 SLC4A1APQ9BWU0 796 aaKnown RBP31.62■■■□□ 2.65
SNRPA-211ENST00000601545 PLEKHG1Q9ULL1 1385 aa31.62■■■□□ 2.65
SNRPA-211ENST00000601545 PROSER2Q86WR7 435 aaPredicted RBP31.61■■■□□ 2.65
SNRPA-211ENST00000601545 ZNF326Q5BKZ1 582 aaKnown RBP31.6■■■□□ 2.65
SNRPA-211ENST00000601545 RBM33Q96EV2 1170 aaKnown RBP31.6■■■□□ 2.65
SNRPA-211ENST00000601545 MYO5BQ9ULV0 1848 aa31.6■■■□□ 2.65
SNRPA-211ENST00000601545 HSPA1LP34931 641 aa31.58■■■□□ 2.65
SNRPA-211ENST00000601545 TBX22Q9Y458 520 aa31.57■■■□□ 2.64
SNRPA-211ENST00000601545 TMEM94Q12767 1356 aa31.55■■■□□ 2.64
SNRPA-211ENST00000601545 SPHKAPQ2M3C7 1700 aa31.5■■■□□ 2.63
SNRPA-211ENST00000601545 DISP3Q9P2K9 1392 aa31.5■■■□□ 2.63
SNRPA-211ENST00000601545 FOXD1Q16676 465 aa31.49■■■□□ 2.63
SNRPA-211ENST00000601545 ALKQ9UM73 1620 aa31.47■■■□□ 2.63
SNRPA-211ENST00000601545 ADAMTS13Q76LX8 1427 aa31.46■■■□□ 2.63
SNRPA-211ENST00000601545 MPHOSPH9Q99550 1183 aa31.43■■■□□ 2.62
SNRPA-211ENST00000601545 TRPM2O94759 1503 aa31.42■■■□□ 2.62
SNRPA-211ENST00000601545 CLTCL1P53675 1640 aa31.41■■■□□ 2.62
SNRPA-211ENST00000601545 NKTRP30414 1462 aaKnown RBP31.4■■■□□ 2.62
SNRPA-211ENST00000601545 AMOTL2Q9Y2J4 779 aa31.39■■■□□ 2.62
SNRPA-211ENST00000601545 XIRP1Q702N8 1843 aaKnown RBP31.38■■■□□ 2.61
SNRPA-211ENST00000601545 C14orf37Q86TY3 774 aa31.38■■■□□ 2.61
SNRPA-211ENST00000601545 SETD5Q9C0A6 1442 aa31.37■■■□□ 2.61
SNRPA-211ENST00000601545 NWD1Q149M9 1564 aa31.37■■■□□ 2.61
SNRPA-211ENST00000601545 MSH6P52701 1360 aa31.35■■■□□ 2.61
SNRPA-211ENST00000601545 PIK3R4Q99570 1358 aa31.35■■■□□ 2.61
SNRPA-211ENST00000601545 CHD2O14647 1828 aaKnown RBP31.33■■■□□ 2.61
SNRPA-211ENST00000601545 VGFO15240 615 aaPredicted RBP31.32■■■□□ 2.6
SNRPA-211ENST00000601545 DIP2AQ14689 1571 aa31.3■■■□□ 2.6
SNRPA-211ENST00000601545 PTPRUQ92729 1446 aa31.3■■■□□ 2.6
SNRPA-211ENST00000601545 RPGRIP1LQ68CZ1 1315 aa31.29■■■□□ 2.6
SNRPA-211ENST00000601545 SLAIN2Q9P270 581 aa31.29■■■□□ 2.6
SNRPA-211ENST00000601545 ACIN1Q9UKV3 1341 aaKnown RBP31.28■■■□□ 2.6
SNRPA-211ENST00000601545 RGL3Q3MIN7 710 aa31.28■■■□□ 2.6
SNRPA-211ENST00000601545 KIF1BO60333 1816 aa31.28■■■□□ 2.6
SNRPA-211ENST00000601545 FAM135BQ49AJ0 1406 aa31.27■■■□□ 2.6
SNRPA-211ENST00000601545 NEXMIFQ5QGS0 1516 aa31.27■■■□□ 2.6
SNRPA-211ENST00000601545 METP08581 1390 aa31.27■■■□□ 2.6
SNRPA-211ENST00000601545 ILDR2Q71H61 639 aa31.26■■■□□ 2.59
SNRPA-211ENST00000601545 C19orf44Q9H6X5 657 aa31.25■■■□□ 2.59
SNRPA-211ENST00000601545 RAB3GAP2Q9H2M9 1393 aa31.25■■■□□ 2.59
SNRPA-211ENST00000601545 CCDC144AA2RUR9 1427 aa31.24■■■□□ 2.59
SNRPA-211ENST00000601545 SETBP1Q9Y6X0 1596 aa31.24■■■□□ 2.59
SNRPA-211ENST00000601545 NCOA3Q9Y6Q9 1424 aa31.23■■■□□ 2.59
SNRPA-211ENST00000601545 ATF3P18847 181 aa31.22■■■□□ 2.59
SNRPA-211ENST00000601545 NRXN3Q9Y4C0 1643 aa31.22■■■□□ 2.59
SNRPA-211ENST00000601545 CADPS2Q86UW7 1296 aa31.19■■■□□ 2.58
SNRPA-211ENST00000601545 ADGRF5Q8IZF2 1346 aa31.13■■■□□ 2.57
SNRPA-211ENST00000601545 ROBO1Q9Y6N7 1651 aa31.11■■■□□ 2.57
SNRPA-211ENST00000601545 SPATA31E1Q6ZUB1 1445 aa31.1■■■□□ 2.57
SNRPA-211ENST00000601545 PHF23Q9BUL5 403 aaPredicted RBP31.09■■■□□ 2.57
SNRPA-211ENST00000601545 MED1Q15648 1581 aaPredicted RBP31.09■■■□□ 2.57
SNRPA-211ENST00000601545 XRN1Q8IZH2 1706 aaKnown RBP31.07■■■□□ 2.56
SNRPA-211ENST00000601545 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.06■■■□□ 2.56
SNRPA-211ENST00000601545 HRCP23327 699 aa31.05■■■□□ 2.56
SNRPA-211ENST00000601545 ANKRD30BQ9BXX2 1392 aa31.05■■■□□ 2.56
SNRPA-211ENST00000601545 PPLO60437 1756 aa31.03■■■□□ 2.56
SNRPA-211ENST00000601545 STK26Q9P289 416 aa31.01■■■□□ 2.55
SNRPA-211ENST00000601545 ROBO2Q9HCK4 1378 aa31.01■■■□□ 2.55
SNRPA-211ENST00000601545 BRINP3Q76B58 766 aa31■■■□□ 2.55
SNRPA-211ENST00000601545 TMEM132EQ6IEE7 984 aa30.99■■■□□ 2.55
SNRPA-211ENST00000601545 DCCP43146 1447 aa30.97■■■□□ 2.55
SNRPA-211ENST00000601545 ADGRL3Q9HAR2 1447 aa30.97■■■□□ 2.55
SNRPA-211ENST00000601545 SOCS7O14512 581 aa30.94■■■□□ 2.54
SNRPA-211ENST00000601545 PTCH1Q13635 1447 aa30.93■■■□□ 2.54
SNRPA-211ENST00000601545 SETD1AO15047 1707 aaKnown RBP30.93■■■□□ 2.54
SNRPA-211ENST00000601545 MST1RQ04912 1400 aa30.92■■■□□ 2.54
SNRPA-211ENST00000601545 PHLPP1O60346 1717 aa30.92■■■□□ 2.54
SNRPA-211ENST00000601545 JCADQ9P266 1359 aa30.92■■■□□ 2.54
SNRPA-211ENST00000601545 WAPLQ7Z5K2 1190 aa30.9■■■□□ 2.54
SNRPA-211ENST00000601545 C14orf93Q9H972 538 aaKnown RBP30.9■■■□□ 2.54
SNRPA-211ENST00000601545 CFAP70Q5T0N1 1121 aa30.89■■■□□ 2.54
SNRPA-211ENST00000601545 KDM2AQ9Y2K7 1162 aa30.88■■■□□ 2.53
SNRPA-211ENST00000601545 PIK3C2GO75747 1445 aa30.88■■■□□ 2.53
SNRPA-211ENST00000601545 DDX17Q92841 729 aaKnown RBP30.86■■■□□ 2.53
SNRPA-211ENST00000601545 RGS17Q9UGC6 210 aaPredicted RBP30.86■■■□□ 2.53
SNRPA-211ENST00000601545 LRPPRCP42704 1394 aaKnown RBP30.86■■■□□ 2.53
SNRPA-211ENST00000601545 IFT172Q9UG01 1749 aa30.84■■■□□ 2.53
SNRPA-211ENST00000601545 DCAF11Q8TEB1 546 aa30.84■■■□□ 2.53
SNRPA-211ENST00000601545 PRAG1Q86YV5 1406 aa30.83■■■□□ 2.53
SNRPA-211ENST00000601545 ABCC11Q96J66 1382 aa30.83■■■□□ 2.53
SNRPA-211ENST00000601545 ORAI2Q96SN7 254 aa30.83■■■□□ 2.53
SNRPA-211ENST00000601545 NALCNQ8IZF0 1738 aa30.83■■■□□ 2.53
SNRPA-211ENST00000601545 COL16A1Q07092 1604 aaPredicted RBP30.82■■■□□ 2.52
SNRPA-211ENST00000601545 ASXL1Q8IXJ9 1541 aa30.82■■■□□ 2.52
SNRPA-211ENST00000601545 C1orf167Q5SNV9 1468 aa30.82■■■□□ 2.52
SNRPA-211ENST00000601545 AHDC1Q5TGY3 1603 aaPredicted RBP30.8■■■□□ 2.52
SNRPA-211ENST00000601545 YTHDC2Q9H6S0 1430 aaKnown RBP30.8■■■□□ 2.52
SNRPA-211ENST00000601545 DHX57Q6P158 1386 aaKnown RBP30.79■■■□□ 2.52
SNRPA-211ENST00000601545 PLEKHH1Q9ULM0 1364 aa30.79■■■□□ 2.52
SNRPA-211ENST00000601545 LRRC59Q96AG4 307 aaKnown RBP30.78■■■□□ 2.52
SNRPA-211ENST00000601545 SPATA31A6Q5VVP1 1343 aa30.77■■■□□ 2.52
SNRPA-211ENST00000601545 MYOM2P54296 1465 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms