RNA–Protein interactions for RNA: ENST00000601267.5

C19orf48-213, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-213ENST00000601267 MSH6P52701 1360 aa19.09■□□□□ 0.65
C19orf48-213ENST00000601267 PHLPP1O60346 1717 aa19.07■□□□□ 0.64
C19orf48-213ENST00000601267 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
C19orf48-213ENST00000601267 MYO5BQ9ULV0 1848 aa19.06■□□□□ 0.64
C19orf48-213ENST00000601267 SLC52A1Q9NWF4 448 aa19.05■□□□□ 0.64
C19orf48-213ENST00000601267 GCC2Q8IWJ2 1684 aa19.05■□□□□ 0.64
C19orf48-213ENST00000601267 SETD1AO15047 1707 aaKnown RBP19.04■□□□□ 0.64
C19orf48-213ENST00000601267 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
C19orf48-213ENST00000601267 ADGRL2O95490 1459 aa19.03■□□□□ 0.64
C19orf48-213ENST00000601267 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
C19orf48-213ENST00000601267 SLAIN2Q9P270 581 aa19.02■□□□□ 0.64
C19orf48-213ENST00000601267 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
C19orf48-213ENST00000601267 C14orf37Q86TY3 774 aa19.01■□□□□ 0.63
C19orf48-213ENST00000601267 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
C19orf48-213ENST00000601267 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
C19orf48-213ENST00000601267 ZFYVE9O95405 1425 aa19■□□□□ 0.63
C19orf48-213ENST00000601267 ANKRD50Q9ULJ7 1429 aa19■□□□□ 0.63
C19orf48-213ENST00000601267 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
C19orf48-213ENST00000601267 JCADQ9P266 1359 aa19■□□□□ 0.63
C19orf48-213ENST00000601267 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
C19orf48-213ENST00000601267 TMEM131LA2VDJ0 1609 aa18.98■□□□□ 0.63
C19orf48-213ENST00000601267 HDGFP51858 240 aaKnown RBP18.97■□□□□ 0.63
C19orf48-213ENST00000601267 COL16A1Q07092 1604 aaPredicted RBP18.96■□□□□ 0.63
C19orf48-213ENST00000601267 MEX3CQ5U5Q3 659 aaKnown RBP18.95■□□□□ 0.62
C19orf48-213ENST00000601267 UNC13BO14795 1591 aa18.93■□□□□ 0.62
C19orf48-213ENST00000601267 LRP6O75581 1613 aa18.92■□□□□ 0.62
C19orf48-213ENST00000601267 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
C19orf48-213ENST00000601267 TBX22Q9Y458 520 aa18.92■□□□□ 0.62
C19orf48-213ENST00000601267 E9PCH4 1651 aa18.92■□□□□ 0.62
C19orf48-213ENST00000601267 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.91■□□□□ 0.62
C19orf48-213ENST00000601267 ATF3P18847 181 aa18.9■□□□□ 0.62
C19orf48-213ENST00000601267 ADAMTS13Q76LX8 1427 aa18.9■□□□□ 0.62
C19orf48-213ENST00000601267 DIP2AQ14689 1571 aa18.89■□□□□ 0.62
C19orf48-213ENST00000601267 TRIM52Q96A61 297 aa18.89■□□□□ 0.61
C19orf48-213ENST00000601267 NCOA3Q9Y6Q9 1424 aa18.89■□□□□ 0.61
C19orf48-213ENST00000601267 CADPS2Q86UW7 1296 aa18.88■□□□□ 0.61
C19orf48-213ENST00000601267 SPATA31A6Q5VVP1 1343 aa18.88■□□□□ 0.61
C19orf48-213ENST00000601267 AHDC1Q5TGY3 1603 aaPredicted RBP18.88■□□□□ 0.61
C19orf48-213ENST00000601267 SHPRHQ149N8 1683 aa18.86■□□□□ 0.61
C19orf48-213ENST00000601267 TRPM2O94759 1503 aa18.86■□□□□ 0.61
C19orf48-213ENST00000601267 C19orf44Q9H6X5 657 aa18.86■□□□□ 0.61
C19orf48-213ENST00000601267 ZNF772Q68DY9 489 aaPredicted RBP18.85■□□□□ 0.61
C19orf48-213ENST00000601267 IQGAP3Q86VI3 1631 aa18.85■□□□□ 0.61
C19orf48-213ENST00000601267 PIK3R4Q99570 1358 aa18.84■□□□□ 0.61
C19orf48-213ENST00000601267 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
C19orf48-213ENST00000601267 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
C19orf48-213ENST00000601267 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
C19orf48-213ENST00000601267 AMOTL2Q9Y2J4 779 aa18.84■□□□□ 0.61
C19orf48-213ENST00000601267 PTPRUQ92729 1446 aa18.83■□□□□ 0.6
C19orf48-213ENST00000601267 ITGAEP38570 1179 aa18.81■□□□□ 0.6
C19orf48-213ENST00000601267 BRINP3Q76B58 766 aa18.81■□□□□ 0.6
C19orf48-213ENST00000601267 NUP155O75694 1391 aa18.81■□□□□ 0.6
C19orf48-213ENST00000601267 UPF1Q92900 1129 aaKnown RBP eCLIP18.79■□□□□ 0.6not detected■■■■■ 40.1
C19orf48-213ENST00000601267 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
C19orf48-213ENST00000601267 RXRBP28702 533 aa18.78■□□□□ 0.6
C19orf48-213ENST00000601267 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
C19orf48-213ENST00000601267 ZNF326Q5BKZ1 582 aaKnown RBP18.77■□□□□ 0.6
C19orf48-213ENST00000601267 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
C19orf48-213ENST00000601267 XRN1Q8IZH2 1706 aaKnown RBP18.77■□□□□ 0.59
C19orf48-213ENST00000601267 AFF2P51816 1311 aa18.75■□□□□ 0.59
C19orf48-213ENST00000601267 DCCP43146 1447 aa18.75■□□□□ 0.59
C19orf48-213ENST00000601267 SPHKAPQ2M3C7 1700 aa18.75■□□□□ 0.59
C19orf48-213ENST00000601267 SETBP1Q9Y6X0 1596 aa18.74■□□□□ 0.59
C19orf48-213ENST00000601267 NHSL1Q5SYE7 1610 aa18.74■□□□□ 0.59
C19orf48-213ENST00000601267 MST1RQ04912 1400 aa18.74■□□□□ 0.59
C19orf48-213ENST00000601267 DDX17Q92841 729 aaKnown RBP18.72■□□□□ 0.59
C19orf48-213ENST00000601267 METP08581 1390 aa18.71■□□□□ 0.59
C19orf48-213ENST00000601267 C8orf37Q96NL8 207 aa18.71■□□□□ 0.59
C19orf48-213ENST00000601267 SETD5Q9C0A6 1442 aa18.71■□□□□ 0.59
C19orf48-213ENST00000601267 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
C19orf48-213ENST00000601267 LRRC59Q96AG4 307 aaKnown RBP18.69■□□□□ 0.58
C19orf48-213ENST00000601267 CDK12Q9NYV4 1490 aaPredicted RBP18.69■□□□□ 0.58
C19orf48-213ENST00000601267 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
C19orf48-213ENST00000601267 PPARGC1BQ86YN6 1023 aaKnown RBP18.68■□□□□ 0.58
C19orf48-213ENST00000601267 PNPLA6Q8IY17 1366 aa18.67■□□□□ 0.58
C19orf48-213ENST00000601267 RGS12O14924 1447 aa18.66■□□□□ 0.58
C19orf48-213ENST00000601267 CLTCL1P53675 1640 aa18.66■□□□□ 0.58
C19orf48-213ENST00000601267 NEXMIFQ5QGS0 1516 aa18.65■□□□□ 0.58
C19orf48-213ENST00000601267 ADAMTS2O95450 1211 aa18.65■□□□□ 0.58
C19orf48-213ENST00000601267 QTRT2Q9H974 415 aaKnown RBP18.65■□□□□ 0.58
C19orf48-213ENST00000601267 RBM6P78332 1123 aaKnown RBP18.63■□□□□ 0.57
C19orf48-213ENST00000601267 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
C19orf48-213ENST00000601267 KIF1BO60333 1816 aa18.62■□□□□ 0.57
C19orf48-213ENST00000601267 C1orf167Q5SNV9 1468 aa18.61■□□□□ 0.57
C19orf48-213ENST00000601267 ORAI2Q96SN7 254 aa18.57■□□□□ 0.56
C19orf48-213ENST00000601267 PTCH1Q13635 1447 aa18.57■□□□□ 0.56
C19orf48-213ENST00000601267 ROBO2Q9HCK4 1378 aa18.56■□□□□ 0.56
C19orf48-213ENST00000601267 USP21Q9UK80 565 aa18.55■□□□□ 0.56
C19orf48-213ENST00000601267 LAMC1P11047 1609 aa18.54■□□□□ 0.56
C19orf48-213ENST00000601267 ATAD2Q6PL18 1390 aa18.53■□□□□ 0.56
C19orf48-213ENST00000601267 SOS2Q07890 1332 aaPredicted RBP18.52■□□□□ 0.56
C19orf48-213ENST00000601267 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
C19orf48-213ENST00000601267 TRPC5Q9UL62 973 aaPredicted RBP18.51■□□□□ 0.55
C19orf48-213ENST00000601267 NAIPQ13075 1403 aa18.49■□□□□ 0.55
C19orf48-213ENST00000601267 HFM1A2PYH4 1435 aa18.49■□□□□ 0.55
C19orf48-213ENST00000601267 ESCO1Q5FWF5 840 aa18.48■□□□□ 0.55
C19orf48-213ENST00000601267 COL22A1Q8NFW1 1626 aaPredicted RBP18.48■□□□□ 0.55
C19orf48-213ENST00000601267 PPLO60437 1756 aa18.47■□□□□ 0.55
C19orf48-213ENST00000601267 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
C19orf48-213ENST00000601267 ATRNO75882 1429 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms