RNA–Protein interactions for RNA: ENST00000601133.5

FARP1-233, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-233	ENST00000601133	PLEKHG3	A1L390	1219 aa		11.47	□□□□□ -0.57
FARP1-233	ENST00000601133	GOLGA8CP	A6NN73	597 aa		11.47	□□□□□ -0.57
FARP1-233	ENST00000601133	NBPF3	Q9H094	633 aa		11.47	□□□□□ -0.57
FARP1-233	ENST00000601133	PTGDR	Q13258	359 aa		11.46	□□□□□ -0.57
FARP1-233	ENST00000601133	TSR1	Q2NL82	804 aa	Known RBP	11.46	□□□□□ -0.57
FARP1-233	ENST00000601133	CDHR5	Q9HBB8	845 aa		11.46	□□□□□ -0.57
FARP1-233	ENST00000601133	KIAA1468	Q9P260	1216 aa		11.46	□□□□□ -0.57
FARP1-233	ENST00000601133	NES	P48681	1621 aa		11.46	□□□□□ -0.58
FARP1-233	ENST00000601133	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.45	□□□□□ -0.58
FARP1-233	ENST00000601133	PEG3	Q9GZU2	1588 aa		11.45	□□□□□ -0.58
FARP1-233	ENST00000601133	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.42	□□□□□ -0.58
FARP1-233	ENST00000601133	THOC2	Q8NI27	1593 aa	Known RBP	11.41	□□□□□ -0.58
FARP1-233	ENST00000601133	BCAM	P50895	628 aa		11.41	□□□□□ -0.58
FARP1-233	ENST00000601133	EN1	Q05925	392 aa	Predicted RBP	11.41	□□□□□ -0.58
FARP1-233	ENST00000601133	TTLL12	Q14166	644 aa	Predicted RBP	11.41	□□□□□ -0.58
FARP1-233	ENST00000601133	KIF21A	Q7Z4S6	1674 aa		11.4	□□□□□ -0.58
FARP1-233	ENST00000601133	DDRGK1	Q96HY6	314 aa		11.4	□□□□□ -0.58
FARP1-233	ENST00000601133	LAMC3	Q9Y6N6	1575 aa		11.4	□□□□□ -0.58
FARP1-233	ENST00000601133	TRIM6-TRIM34	B2RNG4	842 aa		11.39	□□□□□ -0.59
FARP1-233	ENST00000601133	MAP3K7	O43318	606 aa		11.38	□□□□□ -0.59
FARP1-233	ENST00000601133	ZFR	Q96KR1	1074 aa	Known RBP	11.38	□□□□□ -0.59
FARP1-233	ENST00000601133	TSKS	Q9UJT2	592 aa		11.38	□□□□□ -0.59
FARP1-233	ENST00000601133	MROH2B	Q7Z745	1585 aa		11.37	□□□□□ -0.59
FARP1-233	ENST00000601133	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.37	□□□□□ -0.59
FARP1-233	ENST00000601133	ANKK1	Q8NFD2	765 aa		11.37	□□□□□ -0.59
FARP1-233	ENST00000601133	REPIN1	Q9BWE0	567 aa	Known RBP	11.37	□□□□□ -0.59
FARP1-233	ENST00000601133	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.37	□□□□□ -0.59
FARP1-233	ENST00000601133	ONECUT3	O60422	494 aa	Predicted RBP	11.36	□□□□□ -0.59
FARP1-233	ENST00000601133	MS4A1	P11836	297 aa		11.36	□□□□□ -0.59
FARP1-233	ENST00000601133	FAM198A	Q9UFP1	575 aa		11.36	□□□□□ -0.59
FARP1-233	ENST00000601133	LAPTM4B	Q86VI4	370 aa		11.35	□□□□□ -0.59
FARP1-233	ENST00000601133	SOWAHB	A6NEL2	793 aa		11.34	□□□□□ -0.59
FARP1-233	ENST00000601133	C3orf80	F5H4A9	247 aa		11.34	□□□□□ -0.59
FARP1-233	ENST00000601133	UBTF	P17480	764 aa	Known RBP	11.32	□□□□□ -0.6
FARP1-233	ENST00000601133	ZMYND15	Q9H091	742 aa		11.32	□□□□□ -0.6
FARP1-233	ENST00000601133	SMAP	O00193	183 aa		11.31	□□□□□ -0.6
FARP1-233	ENST00000601133	PHOX2B	Q99453	314 aa		11.31	□□□□□ -0.6
FARP1-233	ENST00000601133	WBP1L	Q9NX94	342 aa		11.31	□□□□□ -0.6
FARP1-233	ENST00000601133	FAM98C	Q17RN3	349 aa	Known RBP	11.3	□□□□□ -0.6
FARP1-233	ENST00000601133	FAM161A	Q3B820	660 aa		11.29	□□□□□ -0.6
FARP1-233	ENST00000601133	IFFO2	Q5TF58	517 aa		11.29	□□□□□ -0.6
FARP1-233	ENST00000601133	NPM2	Q86SE8	214 aa	Known RBP	11.29	□□□□□ -0.6
FARP1-233	ENST00000601133	CDCA7L	Q96GN5	454 aa		11.29	□□□□□ -0.6
FARP1-233	ENST00000601133	WIZ	O95785	1651 aa		11.29	□□□□□ -0.6
FARP1-233	ENST00000601133	MDM2	Q00987	491 aa	Predicted RBP	11.28	□□□□□ -0.6
FARP1-233	ENST00000601133	PDS5B	Q9NTI5	1447 aa		11.27	□□□□□ -0.6
FARP1-233	ENST00000601133	PRSS12	P56730	875 aa		11.27	□□□□□ -0.61
FARP1-233	ENST00000601133	TRIM26	Q12899	539 aa	Predicted RBP	11.27	□□□□□ -0.61
FARP1-233	ENST00000601133	TMUB1	Q9BVT8	246 aa		11.27	□□□□□ -0.61
FARP1-233	ENST00000601133	PACS2	Q86VP3	889 aa		11.26	□□□□□ -0.61
FARP1-233	ENST00000601133	NLRP7	Q8WX94	980 aa		11.26	□□□□□ -0.61
FARP1-233	ENST00000601133	RSPH6A	Q9H0K4	717 aa		11.25	□□□□□ -0.61
FARP1-233	ENST00000601133		A0A0G2JS52	829 aa		11.24	□□□□□ -0.61
FARP1-233	ENST00000601133	CLCN1	P35523	988 aa		11.24	□□□□□ -0.61
FARP1-233	ENST00000601133	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.24	□□□□□ -0.61
FARP1-233	ENST00000601133	HPS5	Q9UPZ3	1129 aa		11.24	□□□□□ -0.61
FARP1-233	ENST00000601133	ITGBL1	O95965	494 aa	Predicted RBP	11.23	□□□□□ -0.61
FARP1-233	ENST00000601133	PADI6	Q6TGC4	694 aa		11.23	□□□□□ -0.61
FARP1-233	ENST00000601133	GOPC	Q9HD26	462 aa		11.23	□□□□□ -0.61
FARP1-233	ENST00000601133	GPCPD1	Q9NPB8	672 aa		11.23	□□□□□ -0.61
FARP1-233	ENST00000601133	LRCH3	Q96II8	777 aa		11.22	□□□□□ -0.61
FARP1-233	ENST00000601133	MRC2	Q9UBG0	1479 aa		11.21	□□□□□ -0.61
FARP1-233	ENST00000601133	TATDN2	Q93075	761 aa		11.21	□□□□□ -0.61
FARP1-233	ENST00000601133	PCMTD1	Q96MG8	357 aa	Predicted RBP	11.21	□□□□□ -0.61
FARP1-233	ENST00000601133	WDR62	O43379	1518 aa		11.2	□□□□□ -0.62
FARP1-233	ENST00000601133	CADPS	Q9ULU8	1353 aa		11.2	□□□□□ -0.62
FARP1-233	ENST00000601133	SAMD7	Q7Z3H4	446 aa		11.2	□□□□□ -0.62
FARP1-233	ENST00000601133	METTL3	Q86U44	580 aa	Known RBP	11.2	□□□□□ -0.62
FARP1-233	ENST00000601133	TSR3	Q9UJK0	312 aa	Known RBP	11.2	□□□□□ -0.62
FARP1-233	ENST00000601133	PNMA3	Q9UL41	463 aa		11.2	□□□□□ -0.62
FARP1-233	ENST00000601133	SSTR3	P32745	418 aa	Predicted RBP	11.19	□□□□□ -0.62
FARP1-233	ENST00000601133	SH3D19	Q5HYK7	790 aa		11.19	□□□□□ -0.62
FARP1-233	ENST00000601133	CERK	Q8TCT0	537 aa		11.19	□□□□□ -0.62
FARP1-233	ENST00000601133	C1orf115	Q9H7X2	142 aa		11.18	□□□□□ -0.62
FARP1-233	ENST00000601133	NUDT18	Q6ZVK8	323 aa		11.17	□□□□□ -0.62
FARP1-233	ENST00000601133	ADGRG1	Q9Y653	693 aa		11.17	□□□□□ -0.62
FARP1-233	ENST00000601133	FLII	Q13045	1269 aa		11.16	□□□□□ -0.62
FARP1-233	ENST00000601133	TTC13	Q8NBP0	860 aa		11.16	□□□□□ -0.62
FARP1-233	ENST00000601133	BEGAIN	Q9BUH8	593 aa		11.16	□□□□□ -0.62
FARP1-233	ENST00000601133	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.16	□□□□□ -0.62
FARP1-233	ENST00000601133	CEP164	Q9UPV0	1460 aa		11.16	□□□□□ -0.62
FARP1-233	ENST00000601133	PRDM2	Q13029	1718 aa		11.15	□□□□□ -0.62
FARP1-233	ENST00000601133	ARID3C	A6NKF2	412 aa		11.15	□□□□□ -0.62
FARP1-233	ENST00000601133	NYAP1	Q6ZVC0	841 aa		11.15	□□□□□ -0.62
FARP1-233	ENST00000601133	PXYLP1	Q8TE99	480 aa		11.15	□□□□□ -0.62
FARP1-233	ENST00000601133	NBPF26	B4DH59	902 aa		11.14	□□□□□ -0.63
FARP1-233	ENST00000601133	OAT	P04181	439 aa		11.13	□□□□□ -0.63
FARP1-233	ENST00000601133	PPP4C	P60510	307 aa		11.13	□□□□□ -0.63
FARP1-233	ENST00000601133	ARID3A	Q99856	593 aa		11.13	□□□□□ -0.63
FARP1-233	ENST00000601133	FANCD2	Q9BXW9	1451 aa		11.12	□□□□□ -0.63
FARP1-233	ENST00000601133	HRC	P23327	699 aa		11.12	□□□□□ -0.63
FARP1-233	ENST00000601133	KCNC4	Q03721	635 aa		11.12	□□□□□ -0.63
FARP1-233	ENST00000601133	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.12	□□□□□ -0.63
FARP1-233	ENST00000601133	CLUAP1	Q96AJ1	413 aa		11.12	□□□□□ -0.63
FARP1-233	ENST00000601133	RBM27	Q9P2N5	1060 aa	Known RBP	11.12	□□□□□ -0.63
FARP1-233	ENST00000601133	TOP2A	P11388	1531 aa	Known RBP	11.12	□□□□□ -0.63
FARP1-233	ENST00000601133	SKIV2L	Q15477	1246 aa	Known RBP	11.11	□□□□□ -0.63
FARP1-233	ENST00000601133	POLR3E	Q9NVU0	708 aa		11.11	□□□□□ -0.63
FARP1-233	ENST00000601133	RGS20	O76081	388 aa		11.1	□□□□□ -0.63
FARP1-233	ENST00000601133	MCM6	Q14566	821 aa		11.1	□□□□□ -0.63

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