RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 ADGRB3O60242 1522 aa21.27■■□□□ 1
USP29-204ENST00000600940 KCNA6P17658 529 aa21.26■□□□□ 0.99
USP29-204ENST00000600940 RPRD2Q5VT52 1461 aaKnown RBP21.26■□□□□ 0.99
USP29-204ENST00000600940 PPARGC1BQ86YN6 1023 aaKnown RBP21.25■□□□□ 0.99
USP29-204ENST00000600940 RBM33Q96EV2 1170 aaKnown RBP21.24■□□□□ 0.99
USP29-204ENST00000600940 TMEM94Q12767 1356 aa21.23■□□□□ 0.99
USP29-204ENST00000600940 TET3O43151 1660 aa21.23■□□□□ 0.99
USP29-204ENST00000600940 XIRP1Q702N8 1843 aaKnown RBP21.22■□□□□ 0.99
USP29-204ENST00000600940 GCC2Q8IWJ2 1684 aa21.2■□□□□ 0.98
USP29-204ENST00000600940 MYO5BQ9ULV0 1848 aa21.2■□□□□ 0.98
USP29-204ENST00000600940 ROCK1Q13464 1354 aa21.18■□□□□ 0.98
USP29-204ENST00000600940 RIMS2Q9UQ26 1411 aa21.18■□□□□ 0.98
USP29-204ENST00000600940 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
USP29-204ENST00000600940 UNC13BO14795 1591 aa21.17■□□□□ 0.98
USP29-204ENST00000600940 NUP155O75694 1391 aa21.16■□□□□ 0.98
USP29-204ENST00000600940 NUTM2DQ5VT03 806 aaPredicted RBP21.16■□□□□ 0.98
USP29-204ENST00000600940 MSH6P52701 1360 aa21.15■□□□□ 0.98
USP29-204ENST00000600940 PLEKHG1Q9ULL1 1385 aa21.15■□□□□ 0.98
USP29-204ENST00000600940 C14orf37Q86TY3 774 aa21.15■□□□□ 0.98
USP29-204ENST00000600940 NKTRP30414 1462 aaKnown RBP21.13■□□□□ 0.97
USP29-204ENST00000600940 FAM135BQ49AJ0 1406 aa21.13■□□□□ 0.97
USP29-204ENST00000600940 E9PCH4 1651 aa21.13■□□□□ 0.97
USP29-204ENST00000600940 TMEM131LA2VDJ0 1609 aa21.13■□□□□ 0.97
USP29-204ENST00000600940 ZFYVE9O95405 1425 aa21.12■□□□□ 0.97
USP29-204ENST00000600940 IQGAP3Q86VI3 1631 aa21.1■□□□□ 0.97
USP29-204ENST00000600940 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
USP29-204ENST00000600940 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
USP29-204ENST00000600940 SLAIN2Q9P270 581 aa21.09■□□□□ 0.97
USP29-204ENST00000600940 TBX22Q9Y458 520 aa21.09■□□□□ 0.97
USP29-204ENST00000600940 CHD2O14647 1828 aaKnown RBP21.08■□□□□ 0.96
USP29-204ENST00000600940 ZNF326Q5BKZ1 582 aaKnown RBP21.06■□□□□ 0.96
USP29-204ENST00000600940 ATF3P18847 181 aa21.02■□□□□ 0.96
USP29-204ENST00000600940 DIP2AQ14689 1571 aa21■□□□□ 0.95
USP29-204ENST00000600940 PHLPP1O60346 1717 aa21■□□□□ 0.95
USP29-204ENST00000600940 ADAMTS13Q76LX8 1427 aa20.99■□□□□ 0.95
USP29-204ENST00000600940 CADPS2Q86UW7 1296 aa20.99■□□□□ 0.95
USP29-204ENST00000600940 RGS17Q9UGC6 210 aaPredicted RBP20.99■□□□□ 0.95
USP29-204ENST00000600940 AMOTL2Q9Y2J4 779 aa20.99■□□□□ 0.95
USP29-204ENST00000600940 PIK3R4Q99570 1358 aa20.98■□□□□ 0.95
USP29-204ENST00000600940 C19orf44Q9H6X5 657 aa20.98■□□□□ 0.95
USP29-204ENST00000600940 TRPM2O94759 1503 aa20.98■□□□□ 0.95
USP29-204ENST00000600940 SPHKAPQ2M3C7 1700 aa20.98■□□□□ 0.95
USP29-204ENST00000600940 NCOA3Q9Y6Q9 1424 aa20.97■□□□□ 0.95
USP29-204ENST00000600940 TRIM52Q96A61 297 aa20.96■□□□□ 0.95
USP29-204ENST00000600940 JCADQ9P266 1359 aa20.95■□□□□ 0.94
USP29-204ENST00000600940 MEX3CQ5U5Q3 659 aaKnown RBP20.93■□□□□ 0.94
USP29-204ENST00000600940 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.92■□□□□ 0.94
USP29-204ENST00000600940 POTEAQ6S8J7 498 aa20.91■□□□□ 0.94
USP29-204ENST00000600940 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
USP29-204ENST00000600940 PTPRUQ92729 1446 aa20.89■□□□□ 0.94
USP29-204ENST00000600940 RRBP1Q9P2E9 1410 aaKnown RBP20.89■□□□□ 0.94
USP29-204ENST00000600940 KIF1BO60333 1816 aa20.88■□□□□ 0.93
USP29-204ENST00000600940 NAIPQ13075 1403 aa20.87■□□□□ 0.93
USP29-204ENST00000600940 SETBP1Q9Y6X0 1596 aa20.86■□□□□ 0.93
USP29-204ENST00000600940 CLTCL1P53675 1640 aa20.86■□□□□ 0.93
USP29-204ENST00000600940 COL16A1Q07092 1604 aaPredicted RBP20.86■□□□□ 0.93
USP29-204ENST00000600940 SLC4A1APQ9BWU0 796 aaKnown RBP20.85■□□□□ 0.93
USP29-204ENST00000600940 METP08581 1390 aa20.85■□□□□ 0.93
USP29-204ENST00000600940 SPATA31A6Q5VVP1 1343 aa20.84■□□□□ 0.93
USP29-204ENST00000600940 BRINP3Q76B58 766 aa20.84■□□□□ 0.93
USP29-204ENST00000600940 NRXN3Q9Y4C0 1643 aa20.84■□□□□ 0.93
USP29-204ENST00000600940 NUTM2BA6NNL0 878 aaPredicted RBP20.83■□□□□ 0.93
USP29-204ENST00000600940 NUTM2EB1AL46 878 aaPredicted RBP20.83■□□□□ 0.93
USP29-204ENST00000600940 NUTM2AQ8IVF1 878 aaPredicted RBP20.83■□□□□ 0.93
USP29-204ENST00000600940 VGFO15240 615 aaPredicted RBP20.82■□□□□ 0.92
USP29-204ENST00000600940 XRN1Q8IZH2 1706 aaKnown RBP20.81■□□□□ 0.92
USP29-204ENST00000600940 DCCP43146 1447 aa20.81■□□□□ 0.92
USP29-204ENST00000600940 AHDC1Q5TGY3 1603 aaPredicted RBP20.81■□□□□ 0.92
USP29-204ENST00000600940 NEXMIFQ5QGS0 1516 aa20.8■□□□□ 0.92
USP29-204ENST00000600940 ZNF772Q68DY9 489 aaPredicted RBP20.79■□□□□ 0.92
USP29-204ENST00000600940 HFM1A2PYH4 1435 aa20.78■□□□□ 0.92
USP29-204ENST00000600940 ASXL1Q8IXJ9 1541 aa20.76■□□□□ 0.91
USP29-204ENST00000600940 SHPRHQ149N8 1683 aa20.76■□□□□ 0.91
USP29-204ENST00000600940 LRP6O75581 1613 aa20.75■□□□□ 0.91
USP29-204ENST00000600940 LRRC59Q96AG4 307 aaKnown RBP20.75■□□□□ 0.91
USP29-204ENST00000600940 MST1RQ04912 1400 aa20.75■□□□□ 0.91
USP29-204ENST00000600940 ADGRL3Q9HAR2 1447 aa20.75■□□□□ 0.91
USP29-204ENST00000600940 RPGRIP1LQ68CZ1 1315 aa20.75■□□□□ 0.91
USP29-204ENST00000600940 DDX17Q92841 729 aaKnown RBP20.72■□□□□ 0.91
USP29-204ENST00000600940 SETD1AO15047 1707 aaKnown RBP20.71■□□□□ 0.91
USP29-204ENST00000600940 NALCNQ8IZF0 1738 aa20.71■□□□□ 0.91
USP29-204ENST00000600940 MAPK8IP2Q13387 824 aaPredicted RBP20.69■□□□□ 0.9
USP29-204ENST00000600940 RGL3Q3MIN7 710 aa20.69■□□□□ 0.9
USP29-204ENST00000600940 RXRBP28702 533 aa20.68■□□□□ 0.9
USP29-204ENST00000600940 SETD5Q9C0A6 1442 aa20.68■□□□□ 0.9
USP29-204ENST00000600940 NHSL1Q5SYE7 1610 aa20.67■□□□□ 0.9
USP29-204ENST00000600940 C8orf37Q96NL8 207 aa20.67■□□□□ 0.9
USP29-204ENST00000600940 AFF2P51816 1311 aa20.67■□□□□ 0.9
USP29-204ENST00000600940 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
USP29-204ENST00000600940 CCDC144AA2RUR9 1427 aa20.67■□□□□ 0.9
USP29-204ENST00000600940 PTCH1Q13635 1447 aa20.66■□□□□ 0.9
USP29-204ENST00000600940 PPLO60437 1756 aa20.66■□□□□ 0.9
USP29-204ENST00000600940 C1orf167Q5SNV9 1468 aa20.65■□□□□ 0.9
USP29-204ENST00000600940 ORAI2Q96SN7 254 aa20.64■□□□□ 0.89
USP29-204ENST00000600940 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.89
USP29-204ENST00000600940 STK26Q9P289 416 aa20.64■□□□□ 0.89
USP29-204ENST00000600940 ADAMTS2O95450 1211 aa20.63■□□□□ 0.89
USP29-204ENST00000600940 PNPLA6Q8IY17 1366 aa20.62■□□□□ 0.89
USP29-204ENST00000600940 NGLY1Q96IV0 654 aa20.62■□□□□ 0.89
USP29-204ENST00000600940 ADGRF5Q8IZF2 1346 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms