RNA–Protein interactions for RNA: ENST00000600396.1

VAV1-208, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene VAV1, Length 689 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-208ENST00000600396 NWD1Q149M9 1564 aa23.09■■□□□ 1.29
VAV1-208ENST00000600396 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.29
VAV1-208ENST00000600396 KANK4Q5T7N3 995 aaPredicted RBP23.08■■□□□ 1.29
VAV1-208ENST00000600396 ATF3P18847 181 aa23.06■■□□□ 1.28
VAV1-208ENST00000600396 CADPS2Q86UW7 1296 aa23.06■■□□□ 1.28
VAV1-208ENST00000600396 LRP6O75581 1613 aa23.06■■□□□ 1.28
VAV1-208ENST00000600396 COL16A1Q07092 1604 aaPredicted RBP23.05■■□□□ 1.28
VAV1-208ENST00000600396 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
VAV1-208ENST00000600396 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
VAV1-208ENST00000600396 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
VAV1-208ENST00000600396 ABCC5O15440 1437 aa23.05■■□□□ 1.28
VAV1-208ENST00000600396 ADGRB3O60242 1522 aa23.03■■□□□ 1.28
VAV1-208ENST00000600396 PLEKHG1Q9ULL1 1385 aa23.02■■□□□ 1.28
VAV1-208ENST00000600396 NOS1P29475 1434 aa23.02■■□□□ 1.28
VAV1-208ENST00000600396 NCOA3Q9Y6Q9 1424 aa23.02■■□□□ 1.28
VAV1-208ENST00000600396 C19orf44Q9H6X5 657 aa23.02■■□□□ 1.28
VAV1-208ENST00000600396 CHIC2Q9UKJ5 165 aa23.02■■□□□ 1.28
VAV1-208ENST00000600396 LMTK2Q8IWU2 1503 aa23.02■■□□□ 1.28
VAV1-208ENST00000600396 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
VAV1-208ENST00000600396 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
VAV1-208ENST00000600396 ANKRD30AQ9BXX3 1397 aa23■■□□□ 1.27
VAV1-208ENST00000600396 CHD2O14647 1828 aaKnown RBP22.98■■□□□ 1.27
VAV1-208ENST00000600396 RIMS2Q9UQ26 1411 aa22.98■■□□□ 1.27
VAV1-208ENST00000600396 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
VAV1-208ENST00000600396 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.97■■□□□ 1.27
VAV1-208ENST00000600396 AFF2P51816 1311 aa22.96■■□□□ 1.27
VAV1-208ENST00000600396 DAPK1P53355 1430 aa22.96■■□□□ 1.27
VAV1-208ENST00000600396 CDK12Q9NYV4 1490 aaPredicted RBP22.96■■□□□ 1.27
VAV1-208ENST00000600396 CROCC2H7BZ55 1655 aa22.94■■□□□ 1.26
VAV1-208ENST00000600396 SHPRHQ149N8 1683 aa22.94■■□□□ 1.26
VAV1-208ENST00000600396 AHDC1Q5TGY3 1603 aaPredicted RBP22.94■■□□□ 1.26
VAV1-208ENST00000600396 ZFYVE9O95405 1425 aa22.94■■□□□ 1.26
VAV1-208ENST00000600396 SRCAPQ6ZRS2 3230 aa22.93■■□□□ 1.26
VAV1-208ENST00000600396 BRINP3Q76B58 766 aa22.93■■□□□ 1.26
VAV1-208ENST00000600396 NUTM2DQ5VT03 806 aaPredicted RBP22.92■■□□□ 1.26
VAV1-208ENST00000600396 PTPN23Q9H3S7 1636 aa22.92■■□□□ 1.26
VAV1-208ENST00000600396 APLP2Q06481 763 aa22.91■■□□□ 1.26
VAV1-208ENST00000600396 QTRT2Q9H974 415 aaKnown RBP22.91■■□□□ 1.26
VAV1-208ENST00000600396 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.9■■□□□ 1.26
VAV1-208ENST00000600396 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.25
VAV1-208ENST00000600396 C8orf37Q96NL8 207 aa22.89■■□□□ 1.25
VAV1-208ENST00000600396 RPRD2Q5VT52 1461 aaKnown RBP22.89■■□□□ 1.25
VAV1-208ENST00000600396 LRRC59Q96AG4 307 aaKnown RBP22.88■■□□□ 1.25
VAV1-208ENST00000600396 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
VAV1-208ENST00000600396 PIK3R4Q99570 1358 aa22.88■■□□□ 1.25
VAV1-208ENST00000600396 FOXD1Q16676 465 aa22.87■■□□□ 1.25
VAV1-208ENST00000600396 MYO5BQ9ULV0 1848 aa22.85■■□□□ 1.25
VAV1-208ENST00000600396 ADAMTS13Q76LX8 1427 aa22.83■■□□□ 1.25
VAV1-208ENST00000600396 NGLY1Q96IV0 654 aa22.83■■□□□ 1.25
VAV1-208ENST00000600396 GCC2Q8IWJ2 1684 aa22.83■■□□□ 1.24
VAV1-208ENST00000600396 RGS12O14924 1447 aa22.82■■□□□ 1.24
VAV1-208ENST00000600396 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
VAV1-208ENST00000600396 SETD5Q9C0A6 1442 aa22.82■■□□□ 1.24
VAV1-208ENST00000600396 DIP2AQ14689 1571 aa22.81■■□□□ 1.24
VAV1-208ENST00000600396 ZRANB1Q9UGI0 708 aa22.8■■□□□ 1.24
VAV1-208ENST00000600396 ASXL1Q8IXJ9 1541 aa22.78■■□□□ 1.24
VAV1-208ENST00000600396 LOC105371045A0A1W2PR82 267 aa22.78■■□□□ 1.24
VAV1-208ENST00000600396 DCCP43146 1447 aa22.78■■□□□ 1.24
VAV1-208ENST00000600396 ANKRD50Q9ULJ7 1429 aa22.78■■□□□ 1.24
VAV1-208ENST00000600396 ATAD2Q6PL18 1390 aa22.77■■□□□ 1.24
VAV1-208ENST00000600396 ADAMTS2O95450 1211 aa22.77■■□□□ 1.24
VAV1-208ENST00000600396 TRPM2O94759 1503 aa22.77■■□□□ 1.24
VAV1-208ENST00000600396 FAM50AQ14320 339 aaKnown RBP22.75■■□□□ 1.23
VAV1-208ENST00000600396 PTPRUQ92729 1446 aa22.74■■□□□ 1.23
VAV1-208ENST00000600396 DDX17Q92841 729 aaKnown RBP22.74■■□□□ 1.23
VAV1-208ENST00000600396 PNPLA6Q8IY17 1366 aa22.73■■□□□ 1.23
VAV1-208ENST00000600396 MST1RQ04912 1400 aa22.73■■□□□ 1.23
VAV1-208ENST00000600396 ADGRL2O95490 1459 aa22.73■■□□□ 1.23
VAV1-208ENST00000600396 USP21Q9UK80 565 aa22.71■■□□□ 1.23
VAV1-208ENST00000600396 TRPC5Q9UL62 973 aaPredicted RBP22.7■■□□□ 1.22
VAV1-208ENST00000600396 NHSL1Q5SYE7 1610 aa22.68■■□□□ 1.22
VAV1-208ENST00000600396 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
VAV1-208ENST00000600396 CCDC125Q86Z20 511 aa22.66■■□□□ 1.22
VAV1-208ENST00000600396 UNC13BO14795 1591 aa22.63■■□□□ 1.21
VAV1-208ENST00000600396 ADGRL3Q9HAR2 1447 aa22.61■■□□□ 1.21
VAV1-208ENST00000600396 E9PCH4 1651 aa22.61■■□□□ 1.21
VAV1-208ENST00000600396 METP08581 1390 aa22.61■■□□□ 1.21
VAV1-208ENST00000600396 FNBP4Q8N3X1 1017 aaPredicted RBP22.6■■□□□ 1.21
VAV1-208ENST00000600396 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
VAV1-208ENST00000600396 NUP155O75694 1391 aa22.57■■□□□ 1.2
VAV1-208ENST00000600396 C1orf167Q5SNV9 1468 aa22.57■■□□□ 1.2
VAV1-208ENST00000600396 PTCH1Q13635 1447 aa22.57■■□□□ 1.2
VAV1-208ENST00000600396 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
VAV1-208ENST00000600396 SETBP1Q9Y6X0 1596 aa22.56■■□□□ 1.2
VAV1-208ENST00000600396 ORAI2Q96SN7 254 aa22.55■■□□□ 1.2
VAV1-208ENST00000600396 ATRNO75882 1429 aa22.55■■□□□ 1.2
VAV1-208ENST00000600396 EP400Q96L91 3159 aa22.54■■□□□ 1.2
VAV1-208ENST00000600396 NRXN3Q9Y4C0 1643 aa22.53■■□□□ 1.2
VAV1-208ENST00000600396 IQGAP3Q86VI3 1631 aa22.5■■□□□ 1.19
VAV1-208ENST00000600396 GJD4Q96KN9 370 aaPredicted RBP22.5■■□□□ 1.19
VAV1-208ENST00000600396 NALCNQ8IZF0 1738 aa22.48■■□□□ 1.19
VAV1-208ENST00000600396 SF3B2Q13435 895 aaKnown RBP22.47■■□□□ 1.19
VAV1-208ENST00000600396 ROCK1Q13464 1354 aa22.46■■□□□ 1.19
VAV1-208ENST00000600396 ESCO1Q5FWF5 840 aa22.45■■□□□ 1.18
VAV1-208ENST00000600396 LAMC1P11047 1609 aa22.44■■□□□ 1.18
VAV1-208ENST00000600396 NPHP3Q7Z494 1330 aa22.44■■□□□ 1.18
VAV1-208ENST00000600396 BCL9LQ86UU0 1499 aa22.44■■□□□ 1.18
VAV1-208ENST00000600396 BLMP54132 1417 aaPredicted RBP22.42■■□□□ 1.18
VAV1-208ENST00000600396 ITGAEP38570 1179 aa22.42■■□□□ 1.18
VAV1-208ENST00000600396 ROBO2Q9HCK4 1378 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms