RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 PARD3Q8TEW0 1356 aa16.53■□□□□ 0.24
PPFIA4-210ENST00000599966 APAF1O14727 1248 aa16.52■□□□□ 0.24
PPFIA4-210ENST00000599966 SAMD9LQ8IVG5 1584 aa16.52■□□□□ 0.24
PPFIA4-210ENST00000599966 PNNQ9H307 717 aaKnown RBP16.52■□□□□ 0.24
PPFIA4-210ENST00000599966 RRP7AQ9Y3A4 280 aaKnown RBP16.51■□□□□ 0.23
PPFIA4-210ENST00000599966 ERCC6L2Q5T890 1561 aa16.51■□□□□ 0.23
PPFIA4-210ENST00000599966 SAFB2Q14151 953 aaKnown RBP eCLIP16.5■□□□□ 0.23
PPFIA4-210ENST00000599966 SPINK5Q9NQ38 1064 aaPredicted RBP16.49■□□□□ 0.23
PPFIA4-210ENST00000599966 CROCC2H7BZ55 1655 aa16.49■□□□□ 0.23
PPFIA4-210ENST00000599966 TRAPPC8Q9Y2L5 1435 aa16.49■□□□□ 0.23
PPFIA4-210ENST00000599966 SHROOM2Q13796 1616 aa16.49■□□□□ 0.23
PPFIA4-210ENST00000599966 KDM2BQ8NHM5 1336 aa16.48■□□□□ 0.23
PPFIA4-210ENST00000599966 HSP90AA1P07900 732 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-210ENST00000599966 SHANK2Q9UPX8 1470 aa16.48■□□□□ 0.23
PPFIA4-210ENST00000599966 BCAR3O75815 825 aa16.48■□□□□ 0.23
PPFIA4-210ENST00000599966 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
PPFIA4-210ENST00000599966 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-210ENST00000599966 XRCC6P12956 609 aaKnown RBP eCLIP16.47■□□□□ 0.23
PPFIA4-210ENST00000599966 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
PPFIA4-210ENST00000599966 ARHGEF12Q9NZN5 1544 aa16.47■□□□□ 0.23
PPFIA4-210ENST00000599966 KDM5DQ9BY66 1539 aa16.46■□□□□ 0.23
PPFIA4-210ENST00000599966 PLEKHH1Q9ULM0 1364 aa16.46■□□□□ 0.23
PPFIA4-210ENST00000599966 GGT6Q6P531 493 aa16.46■□□□□ 0.23
PPFIA4-210ENST00000599966 ADCY10Q96PN6 1610 aa16.46■□□□□ 0.23
PPFIA4-210ENST00000599966 TMEM132EQ6IEE7 984 aa16.46■□□□□ 0.22
PPFIA4-210ENST00000599966 GOLGA2Q08379 1002 aa16.45■□□□□ 0.22
PPFIA4-210ENST00000599966 TTC37Q6PGP7 1564 aa16.45■□□□□ 0.22
PPFIA4-210ENST00000599966 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
PPFIA4-210ENST00000599966 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
PPFIA4-210ENST00000599966 AMER1Q5JTC6 1135 aaPredicted RBP16.44■□□□□ 0.22
PPFIA4-210ENST00000599966 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
PPFIA4-210ENST00000599966 BCL2L13Q9BXK5 485 aa16.44■□□□□ 0.22
PPFIA4-210ENST00000599966 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
PPFIA4-210ENST00000599966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.22
PPFIA4-210ENST00000599966 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
PPFIA4-210ENST00000599966 CDC42BPBQ9Y5S2 1711 aa16.42■□□□□ 0.22
PPFIA4-210ENST00000599966 MAGI2Q86UL8 1455 aa16.42■□□□□ 0.22
PPFIA4-210ENST00000599966 IGHDP01880 384 aa16.41■□□□□ 0.22
PPFIA4-210ENST00000599966 COL17A1Q9UMD9 1497 aaPredicted RBP16.41■□□□□ 0.22
PPFIA4-210ENST00000599966 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
PPFIA4-210ENST00000599966 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
PPFIA4-210ENST00000599966 CHD1O14646 1710 aa16.41■□□□□ 0.22
PPFIA4-210ENST00000599966 USP19O94966 1318 aa16.4■□□□□ 0.22
PPFIA4-210ENST00000599966 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
PPFIA4-210ENST00000599966 SLC12A5Q9H2X9 1139 aa16.39■□□□□ 0.21
PPFIA4-210ENST00000599966 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
PPFIA4-210ENST00000599966 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
PPFIA4-210ENST00000599966 ARID3AQ99856 593 aa16.38■□□□□ 0.21
PPFIA4-210ENST00000599966 PANK1Q8TE04 598 aa16.38■□□□□ 0.21
PPFIA4-210ENST00000599966 GPRASP1Q5JY77 1395 aa16.37■□□□□ 0.21
PPFIA4-210ENST00000599966 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
PPFIA4-210ENST00000599966 BECN1Q14457 450 aa16.36■□□□□ 0.21
PPFIA4-210ENST00000599966 ARHGEF5Q12774 1597 aa16.36■□□□□ 0.21
PPFIA4-210ENST00000599966 CDCA8Q53HL2 280 aa16.36■□□□□ 0.21
PPFIA4-210ENST00000599966 STK26Q9P289 416 aa16.36■□□□□ 0.21
PPFIA4-210ENST00000599966 TRPM1Q7Z4N2 1603 aa16.36■□□□□ 0.21
PPFIA4-210ENST00000599966 TNNQ9UQP3 1299 aa16.35■□□□□ 0.21
PPFIA4-210ENST00000599966 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
PPFIA4-210ENST00000599966 SLFN5Q08AF3 891 aa16.33■□□□□ 0.21
PPFIA4-210ENST00000599966 ERBB4Q15303 1308 aa16.33■□□□□ 0.2
PPFIA4-210ENST00000599966 CLCN1P35523 988 aa16.33■□□□□ 0.2
PPFIA4-210ENST00000599966 PLCH2O75038 1416 aa16.33■□□□□ 0.2
PPFIA4-210ENST00000599966 PREX2Q70Z35 1606 aa16.32■□□□□ 0.2
PPFIA4-210ENST00000599966 RRP9O43818 475 aaKnown RBP16.32■□□□□ 0.2
PPFIA4-210ENST00000599966 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
PPFIA4-210ENST00000599966 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
PPFIA4-210ENST00000599966 TBC1D2Q9BYX2 928 aa16.32■□□□□ 0.2
PPFIA4-210ENST00000599966 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
PPFIA4-210ENST00000599966 WDR7Q9Y4E6 1490 aa16.31■□□□□ 0.2
PPFIA4-210ENST00000599966 PODXL2Q9NZ53 605 aa16.3■□□□□ 0.2
PPFIA4-210ENST00000599966 KANK1Q14678 1352 aa16.3■□□□□ 0.2
PPFIA4-210ENST00000599966 ANTXR1Q9H6X2 564 aa16.3■□□□□ 0.2
PPFIA4-210ENST00000599966 A0A0U1RQG5 324 aaPredicted RBP16.29■□□□□ 0.2
PPFIA4-210ENST00000599966 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
PPFIA4-210ENST00000599966 BLMP54132 1417 aaPredicted RBP16.29■□□□□ 0.2
PPFIA4-210ENST00000599966 DUOX2Q9NRD8 1548 aa16.28■□□□□ 0.2
PPFIA4-210ENST00000599966 TRAK2O60296 914 aa16.28■□□□□ 0.2
PPFIA4-210ENST00000599966 MCM4P33991 863 aa16.28■□□□□ 0.2
PPFIA4-210ENST00000599966 E9PCH4 1651 aa16.28■□□□□ 0.2
PPFIA4-210ENST00000599966 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
PPFIA4-210ENST00000599966 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
PPFIA4-210ENST00000599966 ESPNB1AK53 854 aa16.26■□□□□ 0.19
PPFIA4-210ENST00000599966 CABP2Q9NPB3 220 aa16.26■□□□□ 0.19
PPFIA4-210ENST00000599966 U2SURPO15042 1029 aaKnown RBP16.26■□□□□ 0.19
PPFIA4-210ENST00000599966 MTHFSP49914 203 aa16.26■□□□□ 0.19
PPFIA4-210ENST00000599966 ABCC2Q92887 1545 aa16.25■□□□□ 0.19
PPFIA4-210ENST00000599966 ATP10AO60312 1499 aa16.25■□□□□ 0.19
PPFIA4-210ENST00000599966 SCAF11Q99590 1463 aaKnown RBP16.25■□□□□ 0.19
PPFIA4-210ENST00000599966 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
PPFIA4-210ENST00000599966 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
PPFIA4-210ENST00000599966 TCP11L2Q8N4U5 519 aa16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 CFAP65Q6ZU64 1925 aaKnown RBP16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 RAPGEF3O95398 923 aa16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 WWC1Q8IX03 1113 aa16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 FSD2A1L4K1 749 aa16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 UPF2Q9HAU5 1272 aaKnown RBP16.24■□□□□ 0.19
PPFIA4-210ENST00000599966 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
PPFIA4-210ENST00000599966 GRPEL1Q9HAV7 217 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms