RNA–Protein interactions for RNA: ENST00000599188.5

PDE4C-214, Transcript of phosphodiesterase 4C, humanhuman

TSL 5

Gene PDE4C, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-214ENST00000599188 CLTCL1P53675 1640 aa16.64■□□□□ 0.25
PDE4C-214ENST00000599188 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.25
PDE4C-214ENST00000599188 KIF3BO15066 747 aa16.63■□□□□ 0.25
PDE4C-214ENST00000599188 SMG6Q86US8 1419 aaKnown RBP16.63■□□□□ 0.25
PDE4C-214ENST00000599188 PER1O15534 1290 aaPredicted RBP16.63■□□□□ 0.25
PDE4C-214ENST00000599188 LRPPRCP42704 1394 aaKnown RBP16.62■□□□□ 0.25
PDE4C-214ENST00000599188 TMF1P82094 1093 aa16.62■□□□□ 0.25
PDE4C-214ENST00000599188 PARD3Q8TEW0 1356 aa16.62■□□□□ 0.25
PDE4C-214ENST00000599188 STAC3Q96MF2 364 aa16.61■□□□□ 0.25
PDE4C-214ENST00000599188 MROH1Q8NDA8 1641 aa16.6■□□□□ 0.25
PDE4C-214ENST00000599188 PTPRMP28827 1452 aa16.6■□□□□ 0.25
PDE4C-214ENST00000599188 FER1L4A9Z1Z3 1794 aa16.6■□□□□ 0.25
PDE4C-214ENST00000599188 NLRP13Q86W25 1043 aa16.59■□□□□ 0.25
PDE4C-214ENST00000599188 NUDCQ9Y266 331 aa16.59■□□□□ 0.25
PDE4C-214ENST00000599188 WASHC2CQ9Y4E1 1318 aa16.59■□□□□ 0.25
PDE4C-214ENST00000599188 IQGAP1P46940 1657 aa16.58■□□□□ 0.25
PDE4C-214ENST00000599188 CEBPAP49715 358 aaPredicted RBP16.58■□□□□ 0.24
PDE4C-214ENST00000599188 PPP4R2Q9NY27 417 aa16.58■□□□□ 0.24
PDE4C-214ENST00000599188 NEURL4Q96JN8 1562 aa16.57■□□□□ 0.24
PDE4C-214ENST00000599188 PANK3Q9H999 370 aa16.57■□□□□ 0.24
PDE4C-214ENST00000599188 SCAF11Q99590 1463 aaKnown RBP16.55■□□□□ 0.24
PDE4C-214ENST00000599188 EFCAB6Q5THR3 1501 aa16.55■□□□□ 0.24
PDE4C-214ENST00000599188 GGT6Q6P531 493 aa16.55■□□□□ 0.24
PDE4C-214ENST00000599188 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
PDE4C-214ENST00000599188 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
PDE4C-214ENST00000599188 UGGT1Q9NYU2 1555 aa16.52■□□□□ 0.24
PDE4C-214ENST00000599188 REREQ9P2R6 1566 aa16.52■□□□□ 0.24
PDE4C-214ENST00000599188 LMTK2Q8IWU2 1503 aa16.51■□□□□ 0.23
PDE4C-214ENST00000599188 ESF1Q9H501 851 aaKnown RBP16.51■□□□□ 0.23
PDE4C-214ENST00000599188 RBM19Q9Y4C8 960 aaKnown RBP16.51■□□□□ 0.23
PDE4C-214ENST00000599188 KIAA1210Q9ULL0 1709 aa16.51■□□□□ 0.23
PDE4C-214ENST00000599188 RNF123Q5XPI4 1314 aa16.51■□□□□ 0.23
PDE4C-214ENST00000599188 MYOM2P54296 1465 aa16.5■□□□□ 0.23
PDE4C-214ENST00000599188 AGLP35573 1532 aa16.49■□□□□ 0.23
PDE4C-214ENST00000599188 EIF3AQ14152 1382 aaKnown RBP16.49■□□□□ 0.23
PDE4C-214ENST00000599188 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
PDE4C-214ENST00000599188 KIF1BO60333 1816 aa16.48■□□□□ 0.23
PDE4C-214ENST00000599188 SYNMO15061 1565 aa16.47■□□□□ 0.23
PDE4C-214ENST00000599188 B4GALNT3Q6L9W6 998 aa16.47■□□□□ 0.23
PDE4C-214ENST00000599188 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
PDE4C-214ENST00000599188 IFT172Q9UG01 1749 aa16.45■□□□□ 0.22
PDE4C-214ENST00000599188 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
PDE4C-214ENST00000599188 INSRP06213 1382 aa16.45■□□□□ 0.22
PDE4C-214ENST00000599188 MROH2AA6NES4 1674 aa16.45■□□□□ 0.22
PDE4C-214ENST00000599188 CLTCQ00610 1675 aaKnown RBP16.45■□□□□ 0.22
PDE4C-214ENST00000599188 HSPA2P54652 639 aa16.45■□□□□ 0.22
PDE4C-214ENST00000599188 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
PDE4C-214ENST00000599188 C3P01024 1663 aa16.44■□□□□ 0.22
PDE4C-214ENST00000599188 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
PDE4C-214ENST00000599188 ADGRB3O60242 1522 aa16.43■□□□□ 0.22
PDE4C-214ENST00000599188 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
PDE4C-214ENST00000599188 NPATQ14207 1427 aa16.42■□□□□ 0.22
PDE4C-214ENST00000599188 AMER1Q5JTC6 1135 aaPredicted RBP16.42■□□□□ 0.22
PDE4C-214ENST00000599188 MYOM1P52179 1685 aa16.42■□□□□ 0.22
PDE4C-214ENST00000599188 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
PDE4C-214ENST00000599188 SALL2Q9Y467 1007 aaPredicted RBP16.41■□□□□ 0.22
PDE4C-214ENST00000599188 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
PDE4C-214ENST00000599188 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
PDE4C-214ENST00000599188 ZMYM3Q14202 1370 aa16.4■□□□□ 0.22
PDE4C-214ENST00000599188 LMTK3Q96Q04 1460 aa16.39■□□□□ 0.22
PDE4C-214ENST00000599188 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
PDE4C-214ENST00000599188 NOS1P29475 1434 aa16.39■□□□□ 0.21
PDE4C-214ENST00000599188 PPP2R1AP30153 589 aa16.39■□□□□ 0.21
PDE4C-214ENST00000599188 ERVK-7P63135 1459 aa16.38■□□□□ 0.21
PDE4C-214ENST00000599188 ABCC3O15438 1527 aa16.38■□□□□ 0.21
PDE4C-214ENST00000599188 CHGAP10645 457 aaKnown RBP16.38■□□□□ 0.21
PDE4C-214ENST00000599188 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
PDE4C-214ENST00000599188 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
PDE4C-214ENST00000599188 MYT1Q01538 1121 aa16.36■□□□□ 0.21
PDE4C-214ENST00000599188 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
PDE4C-214ENST00000599188 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
PDE4C-214ENST00000599188 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
PDE4C-214ENST00000599188 SETD1BQ9UPS6 1966 aaKnown RBP16.35■□□□□ 0.21
PDE4C-214ENST00000599188 RRP1P56182 461 aaKnown RBP16.35■□□□□ 0.21
PDE4C-214ENST00000599188 PPLO60437 1756 aa16.35■□□□□ 0.21
PDE4C-214ENST00000599188 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
PDE4C-214ENST00000599188 SBNO2Q9Y2G9 1366 aa16.35■□□□□ 0.21
PDE4C-214ENST00000599188 FBXO31Q5XUX0 539 aaPredicted RBP16.34■□□□□ 0.21
PDE4C-214ENST00000599188 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
PDE4C-214ENST00000599188 ADAMTS8Q9UP79 889 aa16.34■□□□□ 0.21
PDE4C-214ENST00000599188 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
PDE4C-214ENST00000599188 PREX1Q8TCU6 1659 aa16.34■□□□□ 0.21
PDE4C-214ENST00000599188 CAMSAP1Q5T5Y3 1602 aa16.34■□□□□ 0.21
PDE4C-214ENST00000599188 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
PDE4C-214ENST00000599188 WDR43Q15061 677 aaKnown RBP eCLIP16.32■□□□□ 0.2
PDE4C-214ENST00000599188 C14orf93Q9H972 538 aaKnown RBP16.32■□□□□ 0.2
PDE4C-214ENST00000599188 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
PDE4C-214ENST00000599188 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
PDE4C-214ENST00000599188 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
PDE4C-214ENST00000599188 PIK3C2BO00750 1634 aa16.29■□□□□ 0.2
PDE4C-214ENST00000599188 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
PDE4C-214ENST00000599188 CARD14Q9BXL6 1004 aa16.28■□□□□ 0.2
PDE4C-214ENST00000599188 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
PDE4C-214ENST00000599188 ARHGAP31Q2M1Z3 1444 aa16.27■□□□□ 0.2
PDE4C-214ENST00000599188 ANP32EQ9BTT0 268 aa16.27■□□□□ 0.19
PDE4C-214ENST00000599188 ZC3H13Q5T200 1668 aaKnown RBP16.26■□□□□ 0.19
PDE4C-214ENST00000599188 QRICH2Q9H0J4 1663 aa16.26■□□□□ 0.19
PDE4C-214ENST00000599188 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
PDE4C-214ENST00000599188 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
PDE4C-214ENST00000599188 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms