RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
HOMER3-210ENST00000599097 TMEM94Q12767 1356 aa26.71■■□□□ 1.87
HOMER3-210ENST00000599097 PLEKHG1Q9ULL1 1385 aa26.71■■□□□ 1.87
HOMER3-210ENST00000599097 SLC26A8Q96RN1 970 aa26.7■■□□□ 1.86
HOMER3-210ENST00000599097 IQGAP3Q86VI3 1631 aa26.69■■□□□ 1.86
HOMER3-210ENST00000599097 PROSER2Q86WR7 435 aaPredicted RBP26.69■■□□□ 1.86
HOMER3-210ENST00000599097 XIRP1Q702N8 1843 aaKnown RBP26.69■■□□□ 1.86
HOMER3-210ENST00000599097 ZFYVE9O95405 1425 aa26.68■■□□□ 1.86
HOMER3-210ENST00000599097 FAM135BQ49AJ0 1406 aa26.68■■□□□ 1.86
HOMER3-210ENST00000599097 RIMS2Q9UQ26 1411 aa26.68■■□□□ 1.86
HOMER3-210ENST00000599097 TMEM131LA2VDJ0 1609 aa26.66■■□□□ 1.86
HOMER3-210ENST00000599097 MSH6P52701 1360 aa26.65■■□□□ 1.86
HOMER3-210ENST00000599097 E9PCH4 1651 aa26.63■■□□□ 1.85
HOMER3-210ENST00000599097 NUP155O75694 1391 aa26.63■■□□□ 1.85
HOMER3-210ENST00000599097 CHGAP10645 457 aaKnown RBP26.62■■□□□ 1.85
HOMER3-210ENST00000599097 DIP2AQ14689 1571 aa26.62■■□□□ 1.85
HOMER3-210ENST00000599097 SENP3Q9H4L4 574 aaPredicted RBP26.61■■□□□ 1.85
HOMER3-210ENST00000599097 MYO5BQ9ULV0 1848 aa26.6■■□□□ 1.85
HOMER3-210ENST00000599097 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
HOMER3-210ENST00000599097 NCOA3Q9Y6Q9 1424 aa26.58■■□□□ 1.85
HOMER3-210ENST00000599097 ITGAEP38570 1179 aa26.58■■□□□ 1.85
HOMER3-210ENST00000599097 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
HOMER3-210ENST00000599097 CHD2O14647 1828 aaKnown RBP26.55■■□□□ 1.84
HOMER3-210ENST00000599097 ROBO1Q9Y6N7 1651 aa26.54■■□□□ 1.84
HOMER3-210ENST00000599097 TRPM2O94759 1503 aa26.5■■□□□ 1.83
HOMER3-210ENST00000599097 C14orf37Q86TY3 774 aa26.49■■□□□ 1.83
HOMER3-210ENST00000599097 SLAIN2Q9P270 581 aa26.49■■□□□ 1.83
HOMER3-210ENST00000599097 SPHKAPQ2M3C7 1700 aa26.48■■□□□ 1.83
HOMER3-210ENST00000599097 ADAMTS13Q76LX8 1427 aa26.47■■□□□ 1.83
HOMER3-210ENST00000599097 CADPS2Q86UW7 1296 aa26.45■■□□□ 1.82
HOMER3-210ENST00000599097 RBM33Q96EV2 1170 aaKnown RBP26.45■■□□□ 1.82
HOMER3-210ENST00000599097 RRBP1Q9P2E9 1410 aaKnown RBP26.45■■□□□ 1.82
HOMER3-210ENST00000599097 C19orf44Q9H6X5 657 aa26.42■■□□□ 1.82
HOMER3-210ENST00000599097 ATF3P18847 181 aa26.41■■□□□ 1.82
HOMER3-210ENST00000599097 PPARGC1BQ86YN6 1023 aaKnown RBP26.41■■□□□ 1.82
HOMER3-210ENST00000599097 PHLPP1O60346 1717 aa26.41■■□□□ 1.82
HOMER3-210ENST00000599097 ZNF326Q5BKZ1 582 aaKnown RBP26.4■■□□□ 1.82
HOMER3-210ENST00000599097 NUTM2DQ5VT03 806 aaPredicted RBP26.4■■□□□ 1.82
HOMER3-210ENST00000599097 JCADQ9P266 1359 aa26.4■■□□□ 1.82
HOMER3-210ENST00000599097 SETBP1Q9Y6X0 1596 aa26.39■■□□□ 1.82
HOMER3-210ENST00000599097 DCCP43146 1447 aa26.38■■□□□ 1.81
HOMER3-210ENST00000599097 AMOTL2Q9Y2J4 779 aa26.36■■□□□ 1.81
HOMER3-210ENST00000599097 NAIPQ13075 1403 aa26.35■■□□□ 1.81
HOMER3-210ENST00000599097 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.34■■□□□ 1.81
HOMER3-210ENST00000599097 HFM1A2PYH4 1435 aa26.31■■□□□ 1.8
HOMER3-210ENST00000599097 XRN1Q8IZH2 1706 aaKnown RBP26.31■■□□□ 1.8
HOMER3-210ENST00000599097 KIF1BO60333 1816 aa26.3■■□□□ 1.8
HOMER3-210ENST00000599097 AHDC1Q5TGY3 1603 aaPredicted RBP26.3■■□□□ 1.8
HOMER3-210ENST00000599097 SPATA31A6Q5VVP1 1343 aa26.3■■□□□ 1.8
HOMER3-210ENST00000599097 CLTCL1P53675 1640 aa26.29■■□□□ 1.8
HOMER3-210ENST00000599097 COL16A1Q07092 1604 aaPredicted RBP26.29■■□□□ 1.8
HOMER3-210ENST00000599097 NRXN3Q9Y4C0 1643 aa26.29■■□□□ 1.8
HOMER3-210ENST00000599097 RGS17Q9UGC6 210 aaPredicted RBP26.28■■□□□ 1.8
HOMER3-210ENST00000599097 PTPRUQ92729 1446 aa26.27■■□□□ 1.8
HOMER3-210ENST00000599097 NEXMIFQ5QGS0 1516 aa26.26■■□□□ 1.79
HOMER3-210ENST00000599097 TRIM52Q96A61 297 aa26.26■■□□□ 1.79
HOMER3-210ENST00000599097 VGFO15240 615 aaPredicted RBP26.24■■□□□ 1.79
HOMER3-210ENST00000599097 RPGRIP1LQ68CZ1 1315 aa26.22■■□□□ 1.79
HOMER3-210ENST00000599097 MEX3CQ5U5Q3 659 aaKnown RBP26.21■■□□□ 1.79
HOMER3-210ENST00000599097 SLC4A1APQ9BWU0 796 aaKnown RBP26.21■■□□□ 1.79
HOMER3-210ENST00000599097 SHPRHQ149N8 1683 aa26.21■■□□□ 1.79
HOMER3-210ENST00000599097 ADGRL3Q9HAR2 1447 aa26.21■■□□□ 1.79
HOMER3-210ENST00000599097 METP08581 1390 aa26.2■■□□□ 1.79
HOMER3-210ENST00000599097 BRINP3Q76B58 766 aa26.19■■□□□ 1.78
HOMER3-210ENST00000599097 ASXL1Q8IXJ9 1541 aa26.18■■□□□ 1.78
HOMER3-210ENST00000599097 ACIN1Q9UKV3 1341 aaKnown RBP26.17■■□□□ 1.78
HOMER3-210ENST00000599097 POTEAQ6S8J7 498 aa26.17■■□□□ 1.78
HOMER3-210ENST00000599097 PTCH1Q13635 1447 aa26.16■■□□□ 1.78
HOMER3-210ENST00000599097 ZNF772Q68DY9 489 aaPredicted RBP26.16■■□□□ 1.78
HOMER3-210ENST00000599097 MST1RQ04912 1400 aa26.15■■□□□ 1.78
HOMER3-210ENST00000599097 PRAG1Q86YV5 1406 aa26.12■■□□□ 1.77
HOMER3-210ENST00000599097 SETD5Q9C0A6 1442 aa26.12■■□□□ 1.77
HOMER3-210ENST00000599097 LRRC59Q96AG4 307 aaKnown RBP26.11■■□□□ 1.77
HOMER3-210ENST00000599097 NHSL1Q5SYE7 1610 aa26.1■■□□□ 1.77
HOMER3-210ENST00000599097 LRP6O75581 1613 aa26.1■■□□□ 1.77
HOMER3-210ENST00000599097 NALCNQ8IZF0 1738 aa26.09■■□□□ 1.77
HOMER3-210ENST00000599097 CCDC144AA2RUR9 1427 aa26.09■■□□□ 1.77
HOMER3-210ENST00000599097 PPLO60437 1756 aa26.07■■□□□ 1.76
HOMER3-210ENST00000599097 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
HOMER3-210ENST00000599097 ANKRD30BQ9BXX2 1392 aa26.02■■□□□ 1.76
HOMER3-210ENST00000599097 C1orf167Q5SNV9 1468 aa26.02■■□□□ 1.76
HOMER3-210ENST00000599097 NUTM2BA6NNL0 878 aaPredicted RBP26.01■■□□□ 1.75
HOMER3-210ENST00000599097 NUTM2EB1AL46 878 aaPredicted RBP26.01■■□□□ 1.75
HOMER3-210ENST00000599097 NUTM2AQ8IVF1 878 aaPredicted RBP26.01■■□□□ 1.75
HOMER3-210ENST00000599097 ROBO2Q9HCK4 1378 aa26■■□□□ 1.75
HOMER3-210ENST00000599097 LAMC1P11047 1609 aa25.97■■□□□ 1.75
HOMER3-210ENST00000599097 PNPLA6Q8IY17 1366 aa25.96■■□□□ 1.75
HOMER3-210ENST00000599097 RXRBP28702 533 aa25.96■■□□□ 1.75
HOMER3-210ENST00000599097 CDK12Q9NYV4 1490 aaPredicted RBP25.96■■□□□ 1.75
HOMER3-210ENST00000599097 CDC42BPGQ6DT37 1551 aa25.95■■□□□ 1.75
HOMER3-210ENST00000599097 MPHOSPH9Q99550 1183 aa25.94■■□□□ 1.74
HOMER3-210ENST00000599097 SPATA31E1Q6ZUB1 1445 aa25.93■■□□□ 1.74
HOMER3-210ENST00000599097 AFF2P51816 1311 aa25.92■■□□□ 1.74
HOMER3-210ENST00000599097 TECPR2O15040 1411 aa25.91■■□□□ 1.74
HOMER3-210ENST00000599097 FOXD1Q16676 465 aa25.91■■□□□ 1.74
HOMER3-210ENST00000599097 SOS2Q07890 1332 aaPredicted RBP25.9■■□□□ 1.74
HOMER3-210ENST00000599097 NPHP3Q7Z494 1330 aa25.89■■□□□ 1.74
HOMER3-210ENST00000599097 RGL3Q3MIN7 710 aa25.89■■□□□ 1.74
HOMER3-210ENST00000599097 IFT172Q9UG01 1749 aa25.88■■□□□ 1.73
HOMER3-210ENST00000599097 LRPPRCP42704 1394 aaKnown RBP25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms