RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.95□□□□□ -0.18
FARP1-226ENST00000599040 TMEM131LA2VDJ0 1609 aa13.94□□□□□ -0.18
FARP1-226ENST00000599040 KCNA6P17658 529 aa13.94□□□□□ -0.18
FARP1-226ENST00000599040 RIMS2Q9UQ26 1411 aa13.94□□□□□ -0.18
FARP1-226ENST00000599040 MYO5BQ9ULV0 1848 aa13.94□□□□□ -0.18
FARP1-226ENST00000599040 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
FARP1-226ENST00000599040 NKTRP30414 1462 aaKnown RBP13.93□□□□□ -0.18
FARP1-226ENST00000599040 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
FARP1-226ENST00000599040 CHGAP10645 457 aaKnown RBP13.93□□□□□ -0.18
FARP1-226ENST00000599040 SLC26A8Q96RN1 970 aa13.93□□□□□ -0.18
FARP1-226ENST00000599040 ALKQ9UM73 1620 aa13.93□□□□□ -0.18
FARP1-226ENST00000599040 NWD1Q149M9 1564 aa13.92□□□□□ -0.18
FARP1-226ENST00000599040 PROSER2Q86WR7 435 aaPredicted RBP13.91□□□□□ -0.18
FARP1-226ENST00000599040 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
FARP1-226ENST00000599040 XIRP1Q702N8 1843 aaKnown RBP13.9□□□□□ -0.18
FARP1-226ENST00000599040 DIP2AQ14689 1571 aa13.89□□□□□ -0.19
FARP1-226ENST00000599040 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
FARP1-226ENST00000599040 SPHKAPQ2M3C7 1700 aa13.88□□□□□ -0.19
FARP1-226ENST00000599040 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
FARP1-226ENST00000599040 MSH6P52701 1360 aa13.87□□□□□ -0.19
FARP1-226ENST00000599040 SOCS7O14512 581 aa13.87□□□□□ -0.19
FARP1-226ENST00000599040 TBX22Q9Y458 520 aa13.87□□□□□ -0.19
FARP1-226ENST00000599040 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
FARP1-226ENST00000599040 PIK3R4Q99570 1358 aa13.86□□□□□ -0.19
FARP1-226ENST00000599040 FAM135BQ49AJ0 1406 aa13.86□□□□□ -0.19
FARP1-226ENST00000599040 NAIPQ13075 1403 aa13.85□□□□□ -0.19
FARP1-226ENST00000599040 PHF23Q9BUL5 403 aaPredicted RBP13.85□□□□□ -0.19
FARP1-226ENST00000599040 NCOA3Q9Y6Q9 1424 aa13.84□□□□□ -0.19
FARP1-226ENST00000599040 SENP3Q9H4L4 574 aaPredicted RBP13.84□□□□□ -0.19
FARP1-226ENST00000599040 TRPM2O94759 1503 aa13.84□□□□□ -0.19
FARP1-226ENST00000599040 HFM1A2PYH4 1435 aa13.83□□□□□ -0.2
FARP1-226ENST00000599040 ZNF326Q5BKZ1 582 aaKnown RBP13.83□□□□□ -0.2
FARP1-226ENST00000599040 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
FARP1-226ENST00000599040 C14orf37Q86TY3 774 aa13.82□□□□□ -0.2
FARP1-226ENST00000599040 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
FARP1-226ENST00000599040 ADAMTS13Q76LX8 1427 aa13.81□□□□□ -0.2
FARP1-226ENST00000599040 KIF1BO60333 1816 aa13.8□□□□□ -0.2
FARP1-226ENST00000599040 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
FARP1-226ENST00000599040 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
FARP1-226ENST00000599040 SETBP1Q9Y6X0 1596 aa13.79□□□□□ -0.2
FARP1-226ENST00000599040 CLTCL1P53675 1640 aa13.79□□□□□ -0.2
FARP1-226ENST00000599040 ZEB1P37275 1124 aaPredicted RBP13.78□□□□□ -0.2
FARP1-226ENST00000599040 CADPS2Q86UW7 1296 aa13.78□□□□□ -0.2
FARP1-226ENST00000599040 SLAIN2Q9P270 581 aa13.78□□□□□ -0.2
FARP1-226ENST00000599040 ATF3P18847 181 aa13.77□□□□□ -0.21
FARP1-226ENST00000599040 ACIN1Q9UKV3 1341 aaKnown RBP13.76□□□□□ -0.21
FARP1-226ENST00000599040 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
FARP1-226ENST00000599040 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
FARP1-226ENST00000599040 AMOTL2Q9Y2J4 779 aa13.76□□□□□ -0.21
FARP1-226ENST00000599040 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
FARP1-226ENST00000599040 NRXN3Q9Y4C0 1643 aa13.75□□□□□ -0.21
FARP1-226ENST00000599040 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
FARP1-226ENST00000599040 PHLPP1O60346 1717 aa13.74□□□□□ -0.21
FARP1-226ENST00000599040 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.74□□□□□ -0.21
FARP1-226ENST00000599040 DCCP43146 1447 aa13.73□□□□□ -0.21
FARP1-226ENST00000599040 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
FARP1-226ENST00000599040 VGFO15240 615 aaPredicted RBP13.73□□□□□ -0.21
FARP1-226ENST00000599040 RPGRIP1LQ68CZ1 1315 aa13.72□□□□□ -0.21
FARP1-226ENST00000599040 PTPRUQ92729 1446 aa13.72□□□□□ -0.21
FARP1-226ENST00000599040 JCADQ9P266 1359 aa13.71□□□□□ -0.21
FARP1-226ENST00000599040 SETD5Q9C0A6 1442 aa13.71□□□□□ -0.22
FARP1-226ENST00000599040 METP08581 1390 aa13.7□□□□□ -0.22
FARP1-226ENST00000599040 HRCP23327 699 aa13.69□□□□□ -0.22
FARP1-226ENST00000599040 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
FARP1-226ENST00000599040 AHDC1Q5TGY3 1603 aaPredicted RBP13.68□□□□□ -0.22
FARP1-226ENST00000599040 COL16A1Q07092 1604 aaPredicted RBP13.68□□□□□ -0.22
FARP1-226ENST00000599040 ADGRL3Q9HAR2 1447 aa13.67□□□□□ -0.22
FARP1-226ENST00000599040 PTCH1Q13635 1447 aa13.66□□□□□ -0.22
FARP1-226ENST00000599040 PPLO60437 1756 aa13.66□□□□□ -0.22
FARP1-226ENST00000599040 SPATA31A6Q5VVP1 1343 aa13.65□□□□□ -0.22
FARP1-226ENST00000599040 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
FARP1-226ENST00000599040 RAB3GAP2Q9H2M9 1393 aa13.64□□□□□ -0.23
FARP1-226ENST00000599040 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
FARP1-226ENST00000599040 SETD1AO15047 1707 aaKnown RBP13.64□□□□□ -0.23
FARP1-226ENST00000599040 ASXL1Q8IXJ9 1541 aa13.64□□□□□ -0.23
FARP1-226ENST00000599040 MST1RQ04912 1400 aa13.64□□□□□ -0.23
FARP1-226ENST00000599040 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
FARP1-226ENST00000599040 ANKRD30BQ9BXX2 1392 aa13.63□□□□□ -0.23
FARP1-226ENST00000599040 MEX3CQ5U5Q3 659 aaKnown RBP13.63□□□□□ -0.23
FARP1-226ENST00000599040 PRAG1Q86YV5 1406 aa13.63□□□□□ -0.23
FARP1-226ENST00000599040 CLSPNQ9HAW4 1339 aa13.63□□□□□ -0.23
FARP1-226ENST00000599040 NALCNQ8IZF0 1738 aa13.62□□□□□ -0.23
FARP1-226ENST00000599040 FOXD1Q16676 465 aa13.62□□□□□ -0.23
FARP1-226ENST00000599040 RGS17Q9UGC6 210 aaPredicted RBP13.62□□□□□ -0.23
FARP1-226ENST00000599040 NHSL1Q5SYE7 1610 aa13.61□□□□□ -0.23
FARP1-226ENST00000599040 SPATA31E1Q6ZUB1 1445 aa13.59□□□□□ -0.23
FARP1-226ENST00000599040 RGL3Q3MIN7 710 aa13.59□□□□□ -0.23
FARP1-226ENST00000599040 LRRC59Q96AG4 307 aaKnown RBP13.59□□□□□ -0.23
FARP1-226ENST00000599040 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
FARP1-226ENST00000599040 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
FARP1-226ENST00000599040 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.24
FARP1-226ENST00000599040 C1orf167Q5SNV9 1468 aa13.57□□□□□ -0.24
FARP1-226ENST00000599040 POTEAQ6S8J7 498 aa13.57□□□□□ -0.24
FARP1-226ENST00000599040 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
FARP1-226ENST00000599040 LRP6O75581 1613 aa13.56□□□□□ -0.24
FARP1-226ENST00000599040 PIK3C2GO75747 1445 aa13.55□□□□□ -0.24
FARP1-226ENST00000599040 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
FARP1-226ENST00000599040 LRPPRCP42704 1394 aaKnown RBP13.54□□□□□ -0.24
FARP1-226ENST00000599040 DHX57Q6P158 1386 aaKnown RBP13.54□□□□□ -0.24
FARP1-226ENST00000599040 TECPR2O15040 1411 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms