RNA–Protein interactions for RNA: ENST00000597656.5

KHSRP-208, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 5

Gene KHSRP, Length 328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-208ENST00000597656 SPHKAPQ2M3C7 1700 aa12.31□□□□□ -0.44
KHSRP-208ENST00000597656 STAG3Q9UJ98 1225 aa12.3□□□□□ -0.44
KHSRP-208ENST00000597656 DHX57Q6P158 1386 aaKnown RBP12.29□□□□□ -0.44
KHSRP-208ENST00000597656 CHGAP10645 457 aaKnown RBP12.28□□□□□ -0.44
KHSRP-208ENST00000597656 TMEM131LA2VDJ0 1609 aa12.28□□□□□ -0.44
KHSRP-208ENST00000597656 CLTCL1P53675 1640 aa12.28□□□□□ -0.44
KHSRP-208ENST00000597656 TMEM2Q9UHN6 1383 aa12.28□□□□□ -0.44
KHSRP-208ENST00000597656 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
KHSRP-208ENST00000597656 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
KHSRP-208ENST00000597656 ADGRB3O60242 1522 aa12.27□□□□□ -0.44
KHSRP-208ENST00000597656 LTKP29376 864 aa12.27□□□□□ -0.45
KHSRP-208ENST00000597656 NCKAP5LQ9HCH0 1330 aa12.27□□□□□ -0.45
KHSRP-208ENST00000597656 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.45
KHSRP-208ENST00000597656 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
KHSRP-208ENST00000597656 ANKLE2Q86XL3 938 aa12.26□□□□□ -0.45
KHSRP-208ENST00000597656 SLIT1O75093 1534 aa12.26□□□□□ -0.45
KHSRP-208ENST00000597656 TXNDC2Q86VQ3 553 aa12.25□□□□□ -0.45
KHSRP-208ENST00000597656 ZFYVE9O95405 1425 aa12.24□□□□□ -0.45
KHSRP-208ENST00000597656 SPATA31E1Q6ZUB1 1445 aa12.24□□□□□ -0.45
KHSRP-208ENST00000597656 ZNF326Q5BKZ1 582 aaKnown RBP12.23□□□□□ -0.45
KHSRP-208ENST00000597656 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
KHSRP-208ENST00000597656 EID1Q9Y6B2 187 aa12.23□□□□□ -0.45
KHSRP-208ENST00000597656 RIMS2Q9UQ26 1411 aa12.22□□□□□ -0.45
KHSRP-208ENST00000597656 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
KHSRP-208ENST00000597656 MED14O60244 1454 aa12.21□□□□□ -0.45
KHSRP-208ENST00000597656 SCAF11Q99590 1463 aaKnown RBP12.21□□□□□ -0.45
KHSRP-208ENST00000597656 HDGFP51858 240 aaKnown RBP12.21□□□□□ -0.45
KHSRP-208ENST00000597656 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
KHSRP-208ENST00000597656 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.21□□□□□ -0.45
KHSRP-208ENST00000597656 SIN3AQ96ST3 1273 aa12.21□□□□□ -0.45
KHSRP-208ENST00000597656 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
KHSRP-208ENST00000597656 NEURL4Q96JN8 1562 aa12.2□□□□□ -0.46
KHSRP-208ENST00000597656 MYO5BQ9ULV0 1848 aa12.19□□□□□ -0.46
KHSRP-208ENST00000597656 NPHP4O75161 1426 aaPredicted RBP12.19□□□□□ -0.46
KHSRP-208ENST00000597656 NEXMIFQ5QGS0 1516 aa12.18□□□□□ -0.46
KHSRP-208ENST00000597656 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
KHSRP-208ENST00000597656 KIF1BO60333 1816 aa12.18□□□□□ -0.46
KHSRP-208ENST00000597656 VGFO15240 615 aaPredicted RBP12.17□□□□□ -0.46
KHSRP-208ENST00000597656 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
KHSRP-208ENST00000597656 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
KHSRP-208ENST00000597656 SLC26A8Q96RN1 970 aa12.16□□□□□ -0.46
KHSRP-208ENST00000597656 POLR1AO95602 1720 aaPredicted RBP12.16□□□□□ -0.46
KHSRP-208ENST00000597656 ZRANB1Q9UGI0 708 aa12.15□□□□□ -0.46
KHSRP-208ENST00000597656 ADGRF5Q8IZF2 1346 aa12.14□□□□□ -0.47
KHSRP-208ENST00000597656 CCER1Q8TC90 406 aaPredicted RBP12.14□□□□□ -0.47
KHSRP-208ENST00000597656 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
KHSRP-208ENST00000597656 BCANQ96GW7 911 aa12.14□□□□□ -0.47
KHSRP-208ENST00000597656 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
KHSRP-208ENST00000597656 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
KHSRP-208ENST00000597656 L3MBTL2Q969R5 705 aa12.13□□□□□ -0.47
KHSRP-208ENST00000597656 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
KHSRP-208ENST00000597656 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
KHSRP-208ENST00000597656 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
KHSRP-208ENST00000597656 KDM2AQ9Y2K7 1162 aa12.12□□□□□ -0.47
KHSRP-208ENST00000597656 PPLO60437 1756 aa12.11□□□□□ -0.47
KHSRP-208ENST00000597656 SETBP1Q9Y6X0 1596 aa12.11□□□□□ -0.47
KHSRP-208ENST00000597656 MYOM2P54296 1465 aa12.1□□□□□ -0.47
KHSRP-208ENST00000597656 NRXN1Q9ULB1 1477 aa12.1□□□□□ -0.47
KHSRP-208ENST00000597656 IFT172Q9UG01 1749 aa12.1□□□□□ -0.47
KHSRP-208ENST00000597656 PIK3C2GO75747 1445 aa12.1□□□□□ -0.47
KHSRP-208ENST00000597656 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
KHSRP-208ENST00000597656 METP08581 1390 aa12.08□□□□□ -0.48
KHSRP-208ENST00000597656 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
KHSRP-208ENST00000597656 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
KHSRP-208ENST00000597656 ALKQ9UM73 1620 aa12.07□□□□□ -0.48
KHSRP-208ENST00000597656 PIK3R4Q99570 1358 aa12.06□□□□□ -0.48
KHSRP-208ENST00000597656 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
KHSRP-208ENST00000597656 KCNA6P17658 529 aa12.06□□□□□ -0.48
KHSRP-208ENST00000597656 CPS1P31327 1500 aa12.06□□□□□ -0.48
KHSRP-208ENST00000597656 TONSLQ96HA7 1378 aa12.05□□□□□ -0.48
KHSRP-208ENST00000597656 PTPRUQ92729 1446 aa12.05□□□□□ -0.48
KHSRP-208ENST00000597656 TMEM132EQ6IEE7 984 aa12.05□□□□□ -0.48
KHSRP-208ENST00000597656 PRAG1Q86YV5 1406 aa12.04□□□□□ -0.48
KHSRP-208ENST00000597656 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
KHSRP-208ENST00000597656 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
KHSRP-208ENST00000597656 YY1P25490 414 aa12.03□□□□□ -0.48
KHSRP-208ENST00000597656 NBPF8Q3BBV2 869 aa12.03□□□□□ -0.48
KHSRP-208ENST00000597656 SENP3-EIF4A1A0A087X0R7 540 aa12.02□□□□□ -0.49
KHSRP-208ENST00000597656 STRCP1A6NGW2 1772 aa12.02□□□□□ -0.49
KHSRP-208ENST00000597656 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
KHSRP-208ENST00000597656 NWD1Q149M9 1564 aa12.01□□□□□ -0.49
KHSRP-208ENST00000597656 NBPF1Q3BBV0 1214 aa12.01□□□□□ -0.49
KHSRP-208ENST00000597656 PROSER2Q86WR7 435 aaPredicted RBP12□□□□□ -0.49
KHSRP-208ENST00000597656 STK26Q9P289 416 aa12□□□□□ -0.49
KHSRP-208ENST00000597656 LRPPRCP42704 1394 aaKnown RBP12□□□□□ -0.49
KHSRP-208ENST00000597656 NKTRP30414 1462 aaKnown RBP12□□□□□ -0.49
KHSRP-208ENST00000597656 LRRC7Q96NW7 1537 aa12□□□□□ -0.49
KHSRP-208ENST00000597656 CHD2O14647 1828 aaKnown RBP12□□□□□ -0.49
KHSRP-208ENST00000597656 ABCC11Q96J66 1382 aa11.99□□□□□ -0.49
KHSRP-208ENST00000597656 YTHDC2Q9H6S0 1430 aaKnown RBP11.99□□□□□ -0.49
KHSRP-208ENST00000597656 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
KHSRP-208ENST00000597656 XRN1Q8IZH2 1706 aaKnown RBP11.98□□□□□ -0.49
KHSRP-208ENST00000597656 LAMC1P11047 1609 aa11.98□□□□□ -0.49
KHSRP-208ENST00000597656 TMEM94Q12767 1356 aa11.98□□□□□ -0.49
KHSRP-208ENST00000597656 ROBO2Q9HCK4 1378 aa11.98□□□□□ -0.49
KHSRP-208ENST00000597656 TECPR2O15040 1411 aa11.97□□□□□ -0.49
KHSRP-208ENST00000597656 WAPLQ7Z5K2 1190 aa11.96□□□□□ -0.49
KHSRP-208ENST00000597656 SIRT1Q96EB6 747 aa11.96□□□□□ -0.49
KHSRP-208ENST00000597656 PTCH1Q13635 1447 aa11.95□□□□□ -0.5
KHSRP-208ENST00000597656 KIAA1210Q9ULL0 1709 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms