RNA–Protein interactions for RNA: ENST00000597371.1

C19orf60-205, Transcript of Uncharacterized protein C19orf60, human

TSL 3

Gene C19orf60, Length 1,081 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C19orf60-205	ENST00000597371	CHGA	P10645	457 aa	Known RBP	32.94	■■■□□ 2.86
C19orf60-205	ENST00000597371	ZFYVE9	O95405	1425 aa		32.94	■■■□□ 2.86
C19orf60-205	ENST00000597371	TMEM131L	A2VDJ0	1609 aa		32.93	■■■□□ 2.86
C19orf60-205	ENST00000597371	RIMS2	Q9UQ26	1411 aa		32.93	■■■□□ 2.86
C19orf60-205	ENST00000597371	MYO5B	Q9ULV0	1848 aa		32.91	■■■□□ 2.86
C19orf60-205	ENST00000597371	PPP1R15A	O75807	674 aa	Predicted RBP	32.91	■■■□□ 2.86
C19orf60-205	ENST00000597371	SENP3	Q9H4L4	574 aa	Predicted RBP	32.9	■■■□□ 2.86
C19orf60-205	ENST00000597371	RRBP1	Q9P2E9	1410 aa	Known RBP	32.9	■■■□□ 2.86
C19orf60-205	ENST00000597371	PLEKHG1	Q9ULL1	1385 aa		32.89	■■■□□ 2.86
C19orf60-205	ENST00000597371	XIRP1	Q702N8	1843 aa	Known RBP	32.88	■■■□□ 2.85
C19orf60-205	ENST00000597371	TMEM94	Q12767	1356 aa		32.88	■■■□□ 2.85
C19orf60-205	ENST00000597371	PROSER2	Q86WR7	435 aa	Predicted RBP	32.87	■■■□□ 2.85
C19orf60-205	ENST00000597371	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.86	■■■□□ 2.85
C19orf60-205	ENST00000597371	RBM33	Q96EV2	1170 aa	Known RBP	32.82	■■■□□ 2.84
C19orf60-205	ENST00000597371	NKTR	P30414	1462 aa	Known RBP	32.8	■■■□□ 2.84
C19orf60-205	ENST00000597371	NWD1	Q149M9	1564 aa		32.8	■■■□□ 2.84
C19orf60-205	ENST00000597371	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.8	■■■□□ 2.84
C19orf60-205	ENST00000597371	SOCS7	O14512	581 aa		32.79	■■■□□ 2.84
C19orf60-205	ENST00000597371	TBX22	Q9Y458	520 aa		32.78	■■■□□ 2.84
C19orf60-205	ENST00000597371	MED1	Q15648	1581 aa	Predicted RBP	32.78	■■■□□ 2.84
C19orf60-205	ENST00000597371	NAIP	Q13075	1403 aa		32.76	■■■□□ 2.83
C19orf60-205	ENST00000597371	FAM135B	Q49AJ0	1406 aa		32.73	■■■□□ 2.83
C19orf60-205	ENST00000597371	ADAMTS13	Q76LX8	1427 aa		32.71	■■■□□ 2.83
C19orf60-205	ENST00000597371	CHD2	O14647	1828 aa	Known RBP	32.71	■■■□□ 2.83
C19orf60-205	ENST00000597371	SPHKAP	Q2M3C7	1700 aa		32.7	■■■□□ 2.83
C19orf60-205	ENST00000597371	MSH6	P52701	1360 aa		32.7	■■■□□ 2.82
C19orf60-205	ENST00000597371	DIP2A	Q14689	1571 aa		32.66	■■■□□ 2.82
C19orf60-205	ENST00000597371	PIK3R4	Q99570	1358 aa		32.65	■■■□□ 2.82
C19orf60-205	ENST00000597371	ZNF326	Q5BKZ1	582 aa	Known RBP	32.64	■■■□□ 2.82
C19orf60-205	ENST00000597371	HFM1	A2PYH4	1435 aa		32.63	■■■□□ 2.81
C19orf60-205	ENST00000597371	PHF23	Q9BUL5	403 aa	Predicted RBP	32.63	■■■□□ 2.81
C19orf60-205	ENST00000597371	TRIM52	Q96A61	297 aa		32.62	■■■□□ 2.81
C19orf60-205	ENST00000597371	SLAIN2	Q9P270	581 aa		32.6	■■■□□ 2.81
C19orf60-205	ENST00000597371	NCOA3	Q9Y6Q9	1424 aa		32.6	■■■□□ 2.81
C19orf60-205	ENST00000597371	ROBO1	Q9Y6N7	1651 aa		32.59	■■■□□ 2.81
C19orf60-205	ENST00000597371	C14orf37	Q86TY3	774 aa		32.59	■■■□□ 2.81
C19orf60-205	ENST00000597371	TRPM2	O94759	1503 aa		32.57	■■■□□ 2.8
C19orf60-205	ENST00000597371	AMOTL2	Q9Y2J4	779 aa		32.56	■■■□□ 2.8
C19orf60-205	ENST00000597371	CLTCL1	P53675	1640 aa		32.55	■■■□□ 2.8
C19orf60-205	ENST00000597371	PTPRU	Q92729	1446 aa		32.52	■■■□□ 2.8
C19orf60-205	ENST00000597371	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.52	■■■□□ 2.8
C19orf60-205	ENST00000597371	SETBP1	Q9Y6X0	1596 aa		32.52	■■■□□ 2.8
C19orf60-205	ENST00000597371	C19orf44	Q9H6X5	657 aa		32.51	■■■□□ 2.79
C19orf60-205	ENST00000597371	NRXN3	Q9Y4C0	1643 aa		32.5	■■■□□ 2.79
C19orf60-205	ENST00000597371	CADPS2	Q86UW7	1296 aa		32.48	■■■□□ 2.79
C19orf60-205	ENST00000597371	ATF3	P18847	181 aa		32.47	■■■□□ 2.79
C19orf60-205	ENST00000597371	NEXMIF	Q5QGS0	1516 aa		32.46	■■■□□ 2.79
C19orf60-205	ENST00000597371	KIF1B	O60333	1816 aa		32.46	■■■□□ 2.79
C19orf60-205	ENST00000597371	MET	P08581	1390 aa		32.45	■■■□□ 2.78
C19orf60-205	ENST00000597371	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.43	■■■□□ 2.78
C19orf60-205	ENST00000597371	XRN1	Q8IZH2	1706 aa	Known RBP	32.4	■■■□□ 2.78
C19orf60-205	ENST00000597371	PHLPP1	O60346	1717 aa		32.4	■■■□□ 2.78
C19orf60-205	ENST00000597371	VGF	O15240	615 aa	Predicted RBP	32.38	■■■□□ 2.77
C19orf60-205	ENST00000597371	RGS17	Q9UGC6	210 aa	Predicted RBP	32.37	■■■□□ 2.77
C19orf60-205	ENST00000597371	FOXD1	Q16676	465 aa		32.36	■■■□□ 2.77
C19orf60-205	ENST00000597371	RPGRIP1L	Q68CZ1	1315 aa		32.35	■■■□□ 2.77
C19orf60-205	ENST00000597371	JCAD	Q9P266	1359 aa		32.34	■■■□□ 2.77
C19orf60-205	ENST00000597371	DCC	P43146	1447 aa		32.34	■■■□□ 2.77
C19orf60-205	ENST00000597371	COL16A1	Q07092	1604 aa	Predicted RBP	32.29	■■■□□ 2.76
C19orf60-205	ENST00000597371	BRINP3	Q76B58	766 aa		32.29	■■■□□ 2.76
C19orf60-205	ENST00000597371	MPHOSPH9	Q99550	1183 aa		32.29	■■■□□ 2.76
C19orf60-205	ENST00000597371	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.26	■■■□□ 2.76
C19orf60-205	ENST00000597371	CCDC144A	A2RUR9	1427 aa		32.25	■■■□□ 2.75
C19orf60-205	ENST00000597371	ADGRL3	Q9HAR2	1447 aa		32.25	■■■□□ 2.75
C19orf60-205	ENST00000597371	MST1R	Q04912	1400 aa		32.23	■■■□□ 2.75
C19orf60-205	ENST00000597371	PPL	O60437	1756 aa		32.22	■■■□□ 2.75
C19orf60-205	ENST00000597371	SETD1A	O15047	1707 aa	Known RBP	32.2	■■■□□ 2.75
C19orf60-205	ENST00000597371	POTEA	Q6S8J7	498 aa		32.2	■■■□□ 2.75
C19orf60-205	ENST00000597371	SPATA31A6	Q5VVP1	1343 aa		32.2	■■■□□ 2.74
C19orf60-205	ENST00000597371	PTCH1	Q13635	1447 aa		32.19	■■■□□ 2.74
C19orf60-205	ENST00000597371	RGL3	Q3MIN7	710 aa		32.19	■■■□□ 2.74
C19orf60-205	ENST00000597371	ACIN1	Q9UKV3	1341 aa	Known RBP	32.19	■■■□□ 2.74
C19orf60-205	ENST00000597371	ASXL1	Q8IXJ9	1541 aa		32.18	■■■□□ 2.74
C19orf60-205	ENST00000597371	ROBO2	Q9HCK4	1378 aa		32.18	■■■□□ 2.74
C19orf60-205	ENST00000597371	NALCN	Q8IZF0	1738 aa		32.17	■■■□□ 2.74
C19orf60-205	ENST00000597371	SETD5	Q9C0A6	1442 aa		32.17	■■■□□ 2.74
C19orf60-205	ENST00000597371	SPATA31E1	Q6ZUB1	1445 aa		32.16	■■■□□ 2.74
C19orf60-205	ENST00000597371	ADGRF5	Q8IZF2	1346 aa		32.14	■■■□□ 2.74
C19orf60-205	ENST00000597371	PRAG1	Q86YV5	1406 aa		32.13	■■■□□ 2.73
C19orf60-205	ENST00000597371	SHPRH	Q149N8	1683 aa		32.11	■■■□□ 2.73
C19orf60-205	ENST00000597371	ANKRD30B	Q9BXX2	1392 aa		32.11	■■■□□ 2.73
C19orf60-205	ENST00000597371	MEX3C	Q5U5Q3	659 aa	Known RBP	32.11	■■■□□ 2.73
C19orf60-205	ENST00000597371	LRP6	O75581	1613 aa		32.11	■■■□□ 2.73
C19orf60-205	ENST00000597371	C1orf167	Q5SNV9	1468 aa		32.08	■■■□□ 2.73
C19orf60-205	ENST00000597371	NHSL1	Q5SYE7	1610 aa		32.08	■■■□□ 2.73
C19orf60-205	ENST00000597371	DDX17	Q92841	729 aa	Known RBP	32.06	■■■□□ 2.72
C19orf60-205	ENST00000597371	LRRC59	Q96AG4	307 aa	Known RBP	32.06	■■■□□ 2.72
C19orf60-205	ENST00000597371	RAB3GAP2	Q9H2M9	1393 aa		32.04	■■■□□ 2.72
C19orf60-205	ENST00000597371	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.03	■■■□□ 2.72
C19orf60-205	ENST00000597371	NUTM2E	B1AL46	878 aa	Predicted RBP	32.03	■■■□□ 2.72
C19orf60-205	ENST00000597371	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.03	■■■□□ 2.72
C19orf60-205	ENST00000597371	IFT172	Q9UG01	1749 aa		32.03	■■■□□ 2.72
C19orf60-205	ENST00000597371	STK26	Q9P289	416 aa		32.02	■■■□□ 2.72
C19orf60-205	ENST00000597371	ORAI2	Q96SN7	254 aa		32	■■■□□ 2.71
C19orf60-205	ENST00000597371	ZNF772	Q68DY9	489 aa	Predicted RBP	31.99	■■■□□ 2.71
C19orf60-205	ENST00000597371	PIK3C2G	O75747	1445 aa		31.99	■■■□□ 2.71
C19orf60-205	ENST00000597371	TMEM132E	Q6IEE7	984 aa		31.98	■■■□□ 2.71
C19orf60-205	ENST00000597371	LRPPRC	P42704	1394 aa	Known RBP	31.97	■■■□□ 2.71
C19orf60-205	ENST00000597371	TECPR2	O15040	1411 aa		31.96	■■■□□ 2.71
C19orf60-205	ENST00000597371	WAPL	Q7Z5K2	1190 aa		31.95	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms