RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 ARID4BQ4LE39 1312 aaPredicted RBP13.45□□□□□ -0.26
LINC00343-204ENST00000596398 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
LINC00343-204ENST00000596398 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
LINC00343-204ENST00000596398 RAPGEF3O95398 923 aa13.44□□□□□ -0.26
LINC00343-204ENST00000596398 PDE4AP27815 886 aa13.44□□□□□ -0.26
LINC00343-204ENST00000596398 PSEN2P49810 448 aa13.44□□□□□ -0.26
LINC00343-204ENST00000596398 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
LINC00343-204ENST00000596398 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
LINC00343-204ENST00000596398 TK2O00142 265 aa13.41□□□□□ -0.26
LINC00343-204ENST00000596398 KCNK17Q96T54 332 aa13.38□□□□□ -0.27
LINC00343-204ENST00000596398 LARP6Q9BRS8 491 aaKnown RBP13.37□□□□□ -0.27
LINC00343-204ENST00000596398 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
LINC00343-204ENST00000596398 ARID3CA6NKF2 412 aa13.36□□□□□ -0.27
LINC00343-204ENST00000596398 HRO43593 1189 aa13.36□□□□□ -0.27
LINC00343-204ENST00000596398 ZNF454Q8N9F8 522 aa13.36□□□□□ -0.27
LINC00343-204ENST00000596398 ABCA8O94911 1581 aa13.36□□□□□ -0.27
LINC00343-204ENST00000596398 DDX27Q96GQ7 796 aaKnown RBP13.35□□□□□ -0.27
LINC00343-204ENST00000596398 HCSTQ9UBK5 93 aa13.32□□□□□ -0.28
LINC00343-204ENST00000596398 FOSBP53539 338 aa13.31□□□□□ -0.28
LINC00343-204ENST00000596398 MFSD10Q14728 455 aa13.31□□□□□ -0.28
LINC00343-204ENST00000596398 ABCA9Q8IUA7 1624 aa13.31□□□□□ -0.28
LINC00343-204ENST00000596398 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
LINC00343-204ENST00000596398 SIGLEC1Q9BZZ2 1709 aa13.3□□□□□ -0.28
LINC00343-204ENST00000596398 ARHGEF40Q8TER5 1519 aa13.3□□□□□ -0.28
LINC00343-204ENST00000596398 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
LINC00343-204ENST00000596398 ANO8Q9HCE9 1232 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-204ENST00000596398 EVI5O60447 810 aa13.29□□□□□ -0.28
LINC00343-204ENST00000596398 STRCQ7RTU9 1775 aa13.29□□□□□ -0.28
LINC00343-204ENST00000596398 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
LINC00343-204ENST00000596398 STAC3Q96MF2 364 aa13.28□□□□□ -0.28
LINC00343-204ENST00000596398 NEO1Q92859 1461 aa13.28□□□□□ -0.28
LINC00343-204ENST00000596398 MLECQ14165 292 aa13.27□□□□□ -0.29
LINC00343-204ENST00000596398 VPS9D1Q9Y2B5 631 aa13.27□□□□□ -0.29
LINC00343-204ENST00000596398 ATP10BO94823 1461 aa13.26□□□□□ -0.29
LINC00343-204ENST00000596398 CADPS2Q86UW7 1296 aa13.26□□□□□ -0.29
LINC00343-204ENST00000596398 FER1L4A9Z1Z3 1794 aa13.25□□□□□ -0.29
LINC00343-204ENST00000596398 YEATS2Q9ULM3 1422 aa13.25□□□□□ -0.29
LINC00343-204ENST00000596398 MAP3K9P80192 1104 aa13.25□□□□□ -0.29
LINC00343-204ENST00000596398 RICTORQ6R327 1708 aa13.25□□□□□ -0.29
LINC00343-204ENST00000596398 PREX1Q8TCU6 1659 aa13.24□□□□□ -0.29
LINC00343-204ENST00000596398 PTPREP23469 700 aa13.24□□□□□ -0.29
LINC00343-204ENST00000596398 KCTD12Q96CX2 325 aaKnown RBP13.24□□□□□ -0.29
LINC00343-204ENST00000596398 EMILIN3Q9NT22 766 aa13.24□□□□□ -0.29
LINC00343-204ENST00000596398 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
LINC00343-204ENST00000596398 FANCAO15360 1455 aa13.23□□□□□ -0.29
LINC00343-204ENST00000596398 POGZQ7Z3K3 1410 aa13.23□□□□□ -0.29
LINC00343-204ENST00000596398 TTC37Q6PGP7 1564 aa13.23□□□□□ -0.29
LINC00343-204ENST00000596398 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
LINC00343-204ENST00000596398 CEBPAP49715 358 aaPredicted RBP13.22□□□□□ -0.29
LINC00343-204ENST00000596398 SLC4A5Q9BY07 1137 aa13.22□□□□□ -0.29
LINC00343-204ENST00000596398 PLA2G2EQ9NZK7 142 aa13.22□□□□□ -0.29
LINC00343-204ENST00000596398 ZDHHC16Q969W1 377 aa13.21□□□□□ -0.29
LINC00343-204ENST00000596398 ADAM33Q9BZ11 813 aa13.2□□□□□ -0.3
LINC00343-204ENST00000596398 DENND4BO75064 1496 aaPredicted RBP13.2□□□□□ -0.3
LINC00343-204ENST00000596398 AKNAQ7Z591 1439 aa13.2□□□□□ -0.3
LINC00343-204ENST00000596398 LTBP4Q8N2S1 1624 aa13.19□□□□□ -0.3
LINC00343-204ENST00000596398 P3H3Q8IVL6 736 aa13.18□□□□□ -0.3
LINC00343-204ENST00000596398 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
LINC00343-204ENST00000596398 ZFYVE16Q7Z3T8 1539 aa13.18□□□□□ -0.3
LINC00343-204ENST00000596398 FHOD3Q2V2M9 1422 aa13.17□□□□□ -0.3
LINC00343-204ENST00000596398 ZMYM4Q5VZL5 1548 aa13.15□□□□□ -0.3
LINC00343-204ENST00000596398 EFCAB5A4FU69 1503 aa13.14□□□□□ -0.31
LINC00343-204ENST00000596398 PTPRTO14522 1441 aa13.13□□□□□ -0.31
LINC00343-204ENST00000596398 ARHGEF12Q9NZN5 1544 aa13.13□□□□□ -0.31
LINC00343-204ENST00000596398 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
LINC00343-204ENST00000596398 PCDHGA10Q9Y5H3 936 aa13.13□□□□□ -0.31
LINC00343-204ENST00000596398 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
LINC00343-204ENST00000596398 BBXQ8WY36 941 aaPredicted RBP13.12□□□□□ -0.31
LINC00343-204ENST00000596398 HECW1Q76N89 1606 aa13.12□□□□□ -0.31
LINC00343-204ENST00000596398 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
LINC00343-204ENST00000596398 UBAP1LF5GYI3 381 aa13.1□□□□□ -0.31
LINC00343-204ENST00000596398 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
LINC00343-204ENST00000596398 RAPGEF6Q8TEU7 1601 aa13.1□□□□□ -0.31
LINC00343-204ENST00000596398 PTPN5P54829 565 aa13.09□□□□□ -0.31
LINC00343-204ENST00000596398 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
LINC00343-204ENST00000596398 CFAP74Q9C0B2 1584 aa13.09□□□□□ -0.31
LINC00343-204ENST00000596398 MAGI2Q86UL8 1455 aa13.09□□□□□ -0.31
LINC00343-204ENST00000596398 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
LINC00343-204ENST00000596398 PPP1R3GB7ZBB8 358 aa13.08□□□□□ -0.32
LINC00343-204ENST00000596398 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
LINC00343-204ENST00000596398 FAM9AQ8IZU1 332 aaPredicted RBP13.08□□□□□ -0.32
LINC00343-204ENST00000596398 SETD1BQ9UPS6 1966 aaKnown RBP13.08□□□□□ -0.32
LINC00343-204ENST00000596398 MED1Q15648 1581 aaPredicted RBP13.07□□□□□ -0.32
LINC00343-204ENST00000596398 PHF14O94880 888 aa13.07□□□□□ -0.32
LINC00343-204ENST00000596398 FBXW7Q969H0 707 aa13.07□□□□□ -0.32
LINC00343-204ENST00000596398 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
LINC00343-204ENST00000596398 ATP10AO60312 1499 aa13.06□□□□□ -0.32
LINC00343-204ENST00000596398 DPYSL4O14531 572 aa13.06□□□□□ -0.32
LINC00343-204ENST00000596398 THSD4Q6ZMP0 1018 aa13.06□□□□□ -0.32
LINC00343-204ENST00000596398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.06□□□□□ -0.32
LINC00343-204ENST00000596398 NUP153P49790 1475 aaKnown RBP13.05□□□□□ -0.32
LINC00343-204ENST00000596398 WNT2BQ93097 391 aa13.05□□□□□ -0.32
LINC00343-204ENST00000596398 COL9A1P20849 921 aa13.04□□□□□ -0.32
LINC00343-204ENST00000596398 C3P01024 1663 aa13.04□□□□□ -0.32
LINC00343-204ENST00000596398 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
LINC00343-204ENST00000596398 C9orf84Q5VXU9 1444 aa13.04□□□□□ -0.32
LINC00343-204ENST00000596398 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
LINC00343-204ENST00000596398 NCOA1Q15788 1441 aa13.03□□□□□ -0.32
LINC00343-204ENST00000596398 HSPA1LP34931 641 aa13.02□□□□□ -0.33
LINC00343-204ENST00000596398 PROX2Q3B8N5 592 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms