RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 FGD6Q6ZV73 1430 aa15.3■□□□□ 0.04
NOTCH3-202ENST00000595045 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
NOTCH3-202ENST00000595045 ADGRB3O60242 1522 aa15.29■□□□□ 0.04
NOTCH3-202ENST00000595045 LMTK2Q8IWU2 1503 aa15.29■□□□□ 0.04
NOTCH3-202ENST00000595045 NOS1P29475 1434 aa15.28■□□□□ 0.04
NOTCH3-202ENST00000595045 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
NOTCH3-202ENST00000595045 TRIM52Q96A61 297 aa15.27■□□□□ 0.04
NOTCH3-202ENST00000595045 BCANQ96GW7 911 aa15.27■□□□□ 0.04
NOTCH3-202ENST00000595045 SPATA31A6Q5VVP1 1343 aa15.26■□□□□ 0.03
NOTCH3-202ENST00000595045 MEX3CQ5U5Q3 659 aaKnown RBP15.26■□□□□ 0.03
NOTCH3-202ENST00000595045 ZNF772Q68DY9 489 aaPredicted RBP15.26■□□□□ 0.03
NOTCH3-202ENST00000595045 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
NOTCH3-202ENST00000595045 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
NOTCH3-202ENST00000595045 MYO5BQ9ULV0 1848 aa15.24■□□□□ 0.03
NOTCH3-202ENST00000595045 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
NOTCH3-202ENST00000595045 SHPRHQ149N8 1683 aa15.23■□□□□ 0.03
NOTCH3-202ENST00000595045 SLC52A1Q9NWF4 448 aa15.23■□□□□ 0.03
NOTCH3-202ENST00000595045 ZFYVE9O95405 1425 aa15.23■□□□□ 0.03
NOTCH3-202ENST00000595045 AHDC1Q5TGY3 1603 aaPredicted RBP15.22■□□□□ 0.03
NOTCH3-202ENST00000595045 ADGRL2O95490 1459 aa15.21■□□□□ 0.03
NOTCH3-202ENST00000595045 NCOA3Q9Y6Q9 1424 aa15.21■□□□□ 0.03
NOTCH3-202ENST00000595045 RXRBP28702 533 aa15.21■□□□□ 0.03
NOTCH3-202ENST00000595045 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.2■□□□□ 0.02
NOTCH3-202ENST00000595045 RIMS2Q9UQ26 1411 aa15.2■□□□□ 0.02
NOTCH3-202ENST00000595045 PPP1R15AO75807 674 aaPredicted RBP15.19■□□□□ 0.02
NOTCH3-202ENST00000595045 APLP2Q06481 763 aa15.19■□□□□ 0.02
NOTCH3-202ENST00000595045 C14orf37Q86TY3 774 aa15.19■□□□□ 0.02
NOTCH3-202ENST00000595045 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
NOTCH3-202ENST00000595045 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
NOTCH3-202ENST00000595045 TBX22Q9Y458 520 aa15.18■□□□□ 0.02
NOTCH3-202ENST00000595045 CDK12Q9NYV4 1490 aaPredicted RBP15.18■□□□□ 0.02
NOTCH3-202ENST00000595045 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
NOTCH3-202ENST00000595045 DIP2AQ14689 1571 aa15.17■□□□□ 0.02
NOTCH3-202ENST00000595045 C19orf44Q9H6X5 657 aa15.17■□□□□ 0.02
NOTCH3-202ENST00000595045 TMEM131LA2VDJ0 1609 aa15.17■□□□□ 0.02
NOTCH3-202ENST00000595045 RPRD2Q5VT52 1461 aaKnown RBP15.16■□□□□ 0.02
NOTCH3-202ENST00000595045 ATF3P18847 181 aa15.16■□□□□ 0.02
NOTCH3-202ENST00000595045 HDGFP51858 240 aaKnown RBP15.16■□□□□ 0.02
NOTCH3-202ENST00000595045 NUTM2BA6NNL0 878 aaPredicted RBP15.15■□□□□ 0.02
NOTCH3-202ENST00000595045 NUTM2EB1AL46 878 aaPredicted RBP15.15■□□□□ 0.02
NOTCH3-202ENST00000595045 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
NOTCH3-202ENST00000595045 NUTM2AQ8IVF1 878 aaPredicted RBP15.15■□□□□ 0.02
NOTCH3-202ENST00000595045 ADAMTS13Q76LX8 1427 aa15.15■□□□□ 0.02
NOTCH3-202ENST00000595045 FAM50AQ14320 339 aaKnown RBP15.14■□□□□ 0.01
NOTCH3-202ENST00000595045 AFF2P51816 1311 aa15.14■□□□□ 0.01
NOTCH3-202ENST00000595045 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
NOTCH3-202ENST00000595045 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
NOTCH3-202ENST00000595045 EP400Q96L91 3159 aa15.12■□□□□ 0.01
NOTCH3-202ENST00000595045 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
NOTCH3-202ENST00000595045 RGS12O14924 1447 aa15.11■□□□□ 0.01
NOTCH3-202ENST00000595045 CHGAP10645 457 aaKnown RBP15.1■□□□□ 0.01
NOTCH3-202ENST00000595045 ASXL1Q8IXJ9 1541 aa15.1■□□□□ 0.01
NOTCH3-202ENST00000595045 PTPRUQ92729 1446 aa15.09■□□□□ 0.01
NOTCH3-202ENST00000595045 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
NOTCH3-202ENST00000595045 NHSL1Q5SYE7 1610 aa15.08■□□□□ 0
NOTCH3-202ENST00000595045 AMOTL2Q9Y2J4 779 aa15.08■□□□□ 0
NOTCH3-202ENST00000595045 DCCP43146 1447 aa15.08■□□□□ 0
NOTCH3-202ENST00000595045 TRPM2O94759 1503 aa15.07■□□□□ 0
NOTCH3-202ENST00000595045 RBM6P78332 1123 aaKnown RBP15.07■□□□□ 0
NOTCH3-202ENST00000595045 C8orf37Q96NL8 207 aa15.07■□□□□ 0
NOTCH3-202ENST00000595045 QTRT2Q9H974 415 aaKnown RBP15.07■□□□□ 0
NOTCH3-202ENST00000595045 ROCK1Q13464 1354 aa15.07■□□□□ 0
NOTCH3-202ENST00000595045 MST1RQ04912 1400 aa15.06■□□□□ 0
NOTCH3-202ENST00000595045 UNC13BO14795 1591 aa15.05■□□□□ -0
NOTCH3-202ENST00000595045 XRN1Q8IZH2 1706 aaKnown RBP15.04■□□□□ -0
NOTCH3-202ENST00000595045 E9PCH4 1651 aa15.04■□□□□ -0
NOTCH3-202ENST00000595045 LRRC59Q96AG4 307 aaKnown RBP15.04■□□□□ -0
NOTCH3-202ENST00000595045 PNPLA6Q8IY17 1366 aa15.03■□□□□ -0
NOTCH3-202ENST00000595045 DDX17Q92841 729 aaKnown RBP15.03■□□□□ -0
NOTCH3-202ENST00000595045 NRXN3Q9Y4C0 1643 aa15.01□□□□□ -0.01
NOTCH3-202ENST00000595045 NUP155O75694 1391 aa15□□□□□ -0.01
NOTCH3-202ENST00000595045 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
NOTCH3-202ENST00000595045 ADAMTS2O95450 1211 aa14.99□□□□□ -0.01
NOTCH3-202ENST00000595045 NGLY1Q96IV0 654 aa14.99□□□□□ -0.01
NOTCH3-202ENST00000595045 SETBP1Q9Y6X0 1596 aa14.98□□□□□ -0.01
NOTCH3-202ENST00000595045 ADGRL3Q9HAR2 1447 aa14.98□□□□□ -0.01
NOTCH3-202ENST00000595045 IQGAP3Q86VI3 1631 aa14.97□□□□□ -0.01
NOTCH3-202ENST00000595045 METP08581 1390 aa14.97□□□□□ -0.01
NOTCH3-202ENST00000595045 NALCNQ8IZF0 1738 aa14.96□□□□□ -0.01
NOTCH3-202ENST00000595045 PPARGC1BQ86YN6 1023 aaKnown RBP14.95□□□□□ -0.02
NOTCH3-202ENST00000595045 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
NOTCH3-202ENST00000595045 ITGAEP38570 1179 aa14.94□□□□□ -0.02
NOTCH3-202ENST00000595045 USP21Q9UK80 565 aa14.94□□□□□ -0.02
NOTCH3-202ENST00000595045 LAMC1P11047 1609 aa14.94□□□□□ -0.02
NOTCH3-202ENST00000595045 TRPC5Q9UL62 973 aaPredicted RBP14.93□□□□□ -0.02
NOTCH3-202ENST00000595045 C1orf167Q5SNV9 1468 aa14.93□□□□□ -0.02
NOTCH3-202ENST00000595045 ATRNO75882 1429 aa14.92□□□□□ -0.02
NOTCH3-202ENST00000595045 FOXD1Q16676 465 aa14.92□□□□□ -0.02
NOTCH3-202ENST00000595045 FNBP4Q8N3X1 1017 aaPredicted RBP14.92□□□□□ -0.02
NOTCH3-202ENST00000595045 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
NOTCH3-202ENST00000595045 PTCH1Q13635 1447 aa14.91□□□□□ -0.02
NOTCH3-202ENST00000595045 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
NOTCH3-202ENST00000595045 ORAI2Q96SN7 254 aa14.89□□□□□ -0.03
NOTCH3-202ENST00000595045 SPHKAPQ2M3C7 1700 aa14.89□□□□□ -0.03
NOTCH3-202ENST00000595045 COL22A1Q8NFW1 1626 aaPredicted RBP14.88□□□□□ -0.03
NOTCH3-202ENST00000595045 CCDC125Q86Z20 511 aa14.87□□□□□ -0.03
NOTCH3-202ENST00000595045 NEXMIFQ5QGS0 1516 aa14.87□□□□□ -0.03
NOTCH3-202ENST00000595045 MYOM2P54296 1465 aa14.86□□□□□ -0.03
NOTCH3-202ENST00000595045 BCL9LQ86UU0 1499 aa14.85□□□□□ -0.03
NOTCH3-202ENST00000595045 ROBO2Q9HCK4 1378 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms