RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 LTKP29376 864 aa13.52□□□□□ -0.25
ZNF548-203ENST00000594668 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
ZNF548-203ENST00000594668 NEXMIFQ5QGS0 1516 aa13.51□□□□□ -0.25
ZNF548-203ENST00000594668 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
ZNF548-203ENST00000594668 NCKAP5LQ9HCH0 1330 aa13.51□□□□□ -0.25
ZNF548-203ENST00000594668 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
ZNF548-203ENST00000594668 TXNDC2Q86VQ3 553 aa13.5□□□□□ -0.25
ZNF548-203ENST00000594668 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
ZNF548-203ENST00000594668 RPGRIP1LQ68CZ1 1315 aa13.48□□□□□ -0.25
ZNF548-203ENST00000594668 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
ZNF548-203ENST00000594668 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
ZNF548-203ENST00000594668 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
ZNF548-203ENST00000594668 SCAF11Q99590 1463 aaKnown RBP13.47□□□□□ -0.25
ZNF548-203ENST00000594668 IQGAP1P46940 1657 aa13.47□□□□□ -0.25
ZNF548-203ENST00000594668 HDGFP51858 240 aaKnown RBP13.46□□□□□ -0.25
ZNF548-203ENST00000594668 MED14O60244 1454 aa13.45□□□□□ -0.26
ZNF548-203ENST00000594668 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
ZNF548-203ENST00000594668 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
ZNF548-203ENST00000594668 L3MBTL2Q969R5 705 aa13.45□□□□□ -0.26
ZNF548-203ENST00000594668 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
ZNF548-203ENST00000594668 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
ZNF548-203ENST00000594668 NRXN3Q9Y4C0 1643 aa13.44□□□□□ -0.26
ZNF548-203ENST00000594668 VGFO15240 615 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-203ENST00000594668 PPP1R15AO75807 674 aaPredicted RBP13.44□□□□□ -0.26
ZNF548-203ENST00000594668 NPHP4O75161 1426 aaPredicted RBP13.43□□□□□ -0.26
ZNF548-203ENST00000594668 PLEKHG1Q9ULL1 1385 aa13.42□□□□□ -0.26
ZNF548-203ENST00000594668 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
ZNF548-203ENST00000594668 BCANQ96GW7 911 aa13.41□□□□□ -0.26
ZNF548-203ENST00000594668 TONSLQ96HA7 1378 aa13.41□□□□□ -0.26
ZNF548-203ENST00000594668 MYOM2P54296 1465 aa13.41□□□□□ -0.26
ZNF548-203ENST00000594668 SETBP1Q9Y6X0 1596 aa13.41□□□□□ -0.26
ZNF548-203ENST00000594668 SLC26A8Q96RN1 970 aa13.4□□□□□ -0.26
ZNF548-203ENST00000594668 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
ZNF548-203ENST00000594668 ADAMTS13Q76LX8 1427 aa13.39□□□□□ -0.27
ZNF548-203ENST00000594668 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
ZNF548-203ENST00000594668 CHD2O14647 1828 aaKnown RBP13.39□□□□□ -0.27
ZNF548-203ENST00000594668 ALKQ9UM73 1620 aa13.39□□□□□ -0.27
ZNF548-203ENST00000594668 DMRT2Q9Y5R5 561 aa13.38□□□□□ -0.27
ZNF548-203ENST00000594668 PIK3C2GO75747 1445 aa13.38□□□□□ -0.27
ZNF548-203ENST00000594668 STRCP1A6NGW2 1772 aa13.37□□□□□ -0.27
ZNF548-203ENST00000594668 NBPF8Q3BBV2 869 aa13.36□□□□□ -0.27
ZNF548-203ENST00000594668 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
ZNF548-203ENST00000594668 C14orf93Q9H972 538 aaKnown RBP13.36□□□□□ -0.27
ZNF548-203ENST00000594668 TIMELESSQ9UNS1 1208 aa13.36□□□□□ -0.27
ZNF548-203ENST00000594668 TBX22Q9Y458 520 aa13.36□□□□□ -0.27
ZNF548-203ENST00000594668 PRAG1Q86YV5 1406 aa13.36□□□□□ -0.27
ZNF548-203ENST00000594668 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
ZNF548-203ENST00000594668 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
ZNF548-203ENST00000594668 METP08581 1390 aa13.34□□□□□ -0.27
ZNF548-203ENST00000594668 LAMC1P11047 1609 aa13.34□□□□□ -0.27
ZNF548-203ENST00000594668 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
ZNF548-203ENST00000594668 TMEM132EQ6IEE7 984 aa13.33□□□□□ -0.28
ZNF548-203ENST00000594668 NBPF1Q3BBV0 1214 aa13.32□□□□□ -0.28
ZNF548-203ENST00000594668 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
ZNF548-203ENST00000594668 PTPRUQ92729 1446 aa13.31□□□□□ -0.28
ZNF548-203ENST00000594668 ZNF335Q9H4Z2 1342 aaPredicted RBP13.31□□□□□ -0.28
ZNF548-203ENST00000594668 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
ZNF548-203ENST00000594668 KCNA6P17658 529 aa13.29□□□□□ -0.28
ZNF548-203ENST00000594668 AMOTL2Q9Y2J4 779 aa13.29□□□□□ -0.28
ZNF548-203ENST00000594668 XRN1Q8IZH2 1706 aaKnown RBP13.29□□□□□ -0.28
ZNF548-203ENST00000594668 XIRP1Q702N8 1843 aaKnown RBP13.29□□□□□ -0.28
ZNF548-203ENST00000594668 PIK3R4Q99570 1358 aa13.29□□□□□ -0.28
ZNF548-203ENST00000594668 NWD1Q149M9 1564 aa13.28□□□□□ -0.28
ZNF548-203ENST00000594668 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
ZNF548-203ENST00000594668 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
ZNF548-203ENST00000594668 STK26Q9P289 416 aa13.27□□□□□ -0.29
ZNF548-203ENST00000594668 YTHDC2Q9H6S0 1430 aaKnown RBP13.26□□□□□ -0.29
ZNF548-203ENST00000594668 RALGAPBQ86X10 1494 aa13.25□□□□□ -0.29
ZNF548-203ENST00000594668 LRPPRCP42704 1394 aaKnown RBP13.25□□□□□ -0.29
ZNF548-203ENST00000594668 ARHGEF28Q8N1W1 1705 aaKnown RBP13.25□□□□□ -0.29
ZNF548-203ENST00000594668 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
ZNF548-203ENST00000594668 RBM33Q96EV2 1170 aaKnown RBP13.24□□□□□ -0.29
ZNF548-203ENST00000594668 ABCC11Q96J66 1382 aa13.23□□□□□ -0.29
ZNF548-203ENST00000594668 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
ZNF548-203ENST00000594668 CPS1P31327 1500 aa13.23□□□□□ -0.29
ZNF548-203ENST00000594668 GPRASP1Q5JY77 1395 aa13.22□□□□□ -0.29
ZNF548-203ENST00000594668 ROBO2Q9HCK4 1378 aa13.22□□□□□ -0.29
ZNF548-203ENST00000594668 WAPLQ7Z5K2 1190 aa13.22□□□□□ -0.29
ZNF548-203ENST00000594668 PROSER2Q86WR7 435 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-203ENST00000594668 LRRC7Q96NW7 1537 aa13.22□□□□□ -0.29
ZNF548-203ENST00000594668 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
ZNF548-203ENST00000594668 TECPR2O15040 1411 aa13.22□□□□□ -0.29
ZNF548-203ENST00000594668 CARD11Q9BXL7 1154 aa13.21□□□□□ -0.29
ZNF548-203ENST00000594668 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.21□□□□□ -0.3
ZNF548-203ENST00000594668 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
ZNF548-203ENST00000594668 DLC1Q96QB1 1528 aa13.2□□□□□ -0.3
ZNF548-203ENST00000594668 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
ZNF548-203ENST00000594668 PTCH1Q13635 1447 aa13.2□□□□□ -0.3
ZNF548-203ENST00000594668 PRAM1Q96QH2 718 aa13.19□□□□□ -0.3
ZNF548-203ENST00000594668 NALCNQ8IZF0 1738 aa13.19□□□□□ -0.3
ZNF548-203ENST00000594668 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
ZNF548-203ENST00000594668 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
ZNF548-203ENST00000594668 FAM135BQ49AJ0 1406 aa13.17□□□□□ -0.3
ZNF548-203ENST00000594668 SAFB2Q14151 953 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZNF548-203ENST00000594668 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-203ENST00000594668 CERKQ8TCT0 537 aa13.16□□□□□ -0.3
ZNF548-203ENST00000594668 POGKQ9P215 609 aa13.16□□□□□ -0.3
ZNF548-203ENST00000594668 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-203ENST00000594668 NCOA3Q9Y6Q9 1424 aa13.14□□□□□ -0.31
ZNF548-203ENST00000594668 USP47Q96K76 1375 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms