RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
PNKP-204ENST00000594661 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
PNKP-204ENST00000594661 ARID4BQ4LE39 1312 aaPredicted RBP20.92■□□□□ 0.94
PNKP-204ENST00000594661 POLR3GLQ9BT43 218 aa20.92■□□□□ 0.94
PNKP-204ENST00000594661 ADGRB3O60242 1522 aa20.91■□□□□ 0.94
PNKP-204ENST00000594661 COL17A1Q9UMD9 1497 aaPredicted RBP20.91■□□□□ 0.94
PNKP-204ENST00000594661 IFT172Q9UG01 1749 aa20.9■□□□□ 0.94
PNKP-204ENST00000594661 STAC3Q96MF2 364 aa20.9■□□□□ 0.94
PNKP-204ENST00000594661 NOS1P29475 1434 aa20.89■□□□□ 0.93
PNKP-204ENST00000594661 REREQ9P2R6 1566 aa20.88■□□□□ 0.93
PNKP-204ENST00000594661 MYOM2P54296 1465 aa20.88■□□□□ 0.93
PNKP-204ENST00000594661 ARHGAP31Q2M1Z3 1444 aa20.87■□□□□ 0.93
PNKP-204ENST00000594661 SYNMO15061 1565 aa20.87■□□□□ 0.93
PNKP-204ENST00000594661 IQGAP1P46940 1657 aa20.85■□□□□ 0.93
PNKP-204ENST00000594661 PIK3C2BO00750 1634 aa20.85■□□□□ 0.93
PNKP-204ENST00000594661 ADGRF5Q8IZF2 1346 aa20.84■□□□□ 0.93
PNKP-204ENST00000594661 KIAA1210Q9ULL0 1709 aa20.84■□□□□ 0.93
PNKP-204ENST00000594661 CHGAP10645 457 aaKnown RBP20.84■□□□□ 0.93
PNKP-204ENST00000594661 PRKRIP1Q9H875 184 aaPredicted RBP20.84■□□□□ 0.93
PNKP-204ENST00000594661 AGLP35573 1532 aa20.83■□□□□ 0.93
PNKP-204ENST00000594661 TESK2Q96S53 571 aa20.83■□□□□ 0.93
PNKP-204ENST00000594661 ARHGEF40Q8TER5 1519 aa20.82■□□□□ 0.92
PNKP-204ENST00000594661 CCDC136Q96JN2 1154 aa20.82■□□□□ 0.92
PNKP-204ENST00000594661 NRXN1Q9ULB1 1477 aa20.82■□□□□ 0.92
PNKP-204ENST00000594661 PPLO60437 1756 aa20.81■□□□□ 0.92
PNKP-204ENST00000594661 DISP3Q9P2K9 1392 aa20.8■□□□□ 0.92
PNKP-204ENST00000594661 PREX1Q8TCU6 1659 aa20.79■□□□□ 0.92
PNKP-204ENST00000594661 SCAF11Q99590 1463 aaKnown RBP20.79■□□□□ 0.92
PNKP-204ENST00000594661 CFAP70Q5T0N1 1121 aa20.78■□□□□ 0.92
PNKP-204ENST00000594661 NOP58Q9Y2X3 529 aaKnown RBP20.77■□□□□ 0.92
PNKP-204ENST00000594661 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
PNKP-204ENST00000594661 CLTCQ00610 1675 aaKnown RBP20.74■□□□□ 0.91
PNKP-204ENST00000594661 IDI1Q13907 227 aa20.74■□□□□ 0.91
PNKP-204ENST00000594661 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
PNKP-204ENST00000594661 RPGRIP1LQ68CZ1 1315 aa20.73■□□□□ 0.91
PNKP-204ENST00000594661 TMF1P82094 1093 aa20.72■□□□□ 0.91
PNKP-204ENST00000594661 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.91
PNKP-204ENST00000594661 FBXO31Q5XUX0 539 aaPredicted RBP20.72■□□□□ 0.91
PNKP-204ENST00000594661 NEXMIFQ5QGS0 1516 aa20.72■□□□□ 0.91
PNKP-204ENST00000594661 ERVK-7P63135 1459 aa20.71■□□□□ 0.91
PNKP-204ENST00000594661 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
PNKP-204ENST00000594661 MLECQ14165 292 aa20.71■□□□□ 0.91
PNKP-204ENST00000594661 SLC52A1Q9NWF4 448 aa20.71■□□□□ 0.91
PNKP-204ENST00000594661 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
PNKP-204ENST00000594661 IL27Q8NEV9 243 aa20.7■□□□□ 0.9
PNKP-204ENST00000594661 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
PNKP-204ENST00000594661 MYO5BQ9ULV0 1848 aa20.69■□□□□ 0.9
PNKP-204ENST00000594661 MRS2Q9HD23 443 aa20.69■□□□□ 0.9
PNKP-204ENST00000594661 SETBP1Q9Y6X0 1596 aa20.69■□□□□ 0.9
PNKP-204ENST00000594661 TMEM131LA2VDJ0 1609 aa20.69■□□□□ 0.9
PNKP-204ENST00000594661 NBR1Q14596 966 aa20.68■□□□□ 0.9
PNKP-204ENST00000594661 NUTM2DQ5VT03 806 aaPredicted RBP20.68■□□□□ 0.9
PNKP-204ENST00000594661 C14orf93Q9H972 538 aaKnown RBP20.66■□□□□ 0.9
PNKP-204ENST00000594661 ADGRB1O14514 1584 aa20.66■□□□□ 0.9
PNKP-204ENST00000594661 FAM9BQ8IZU0 186 aa20.65■□□□□ 0.9
PNKP-204ENST00000594661 SPATA31D1Q6ZQQ2 1576 aa20.64■□□□□ 0.89
PNKP-204ENST00000594661 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
PNKP-204ENST00000594661 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.63■□□□□ 0.89
PNKP-204ENST00000594661 VGFO15240 615 aaPredicted RBP20.62■□□□□ 0.89
PNKP-204ENST00000594661 PER1O15534 1290 aaPredicted RBP20.62■□□□□ 0.89
PNKP-204ENST00000594661 PAK3O75914 559 aaPredicted RBP20.62■□□□□ 0.89
PNKP-204ENST00000594661 TMEM132EQ6IEE7 984 aa20.6■□□□□ 0.89
PNKP-204ENST00000594661 PANK3Q9H999 370 aa20.6■□□□□ 0.89
PNKP-204ENST00000594661 ZFYVE9O95405 1425 aa20.6■□□□□ 0.89
PNKP-204ENST00000594661 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
PNKP-204ENST00000594661 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
PNKP-204ENST00000594661 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.89
PNKP-204ENST00000594661 MYOM1P52179 1685 aa20.58■□□□□ 0.89
PNKP-204ENST00000594661 KDM5AP29375 1690 aaKnown RBP20.58■□□□□ 0.88
PNKP-204ENST00000594661 CDCA8Q53HL2 280 aa20.57■□□□□ 0.88
PNKP-204ENST00000594661 KTN1Q86UP2 1357 aaKnown RBP20.57■□□□□ 0.88
PNKP-204ENST00000594661 ZMYM3Q14202 1370 aa20.56■□□□□ 0.88
PNKP-204ENST00000594661 TRHP20396 242 aaPredicted RBP20.56■□□□□ 0.88
PNKP-204ENST00000594661 RALBP1Q15311 655 aa20.56■□□□□ 0.88
PNKP-204ENST00000594661 CENPJQ9HC77 1338 aaPredicted RBP20.55■□□□□ 0.88
PNKP-204ENST00000594661 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
PNKP-204ENST00000594661 ESF1Q9H501 851 aaKnown RBP20.55■□□□□ 0.88
PNKP-204ENST00000594661 PARD3Q8TEW0 1356 aa20.55■□□□□ 0.88
PNKP-204ENST00000594661 SENP3Q9H4L4 574 aaPredicted RBP20.54■□□□□ 0.88
PNKP-204ENST00000594661 QRICH2Q9H0J4 1663 aa20.54■□□□□ 0.88
PNKP-204ENST00000594661 A2ML1A8K2U0 1454 aa20.54■□□□□ 0.88
PNKP-204ENST00000594661 STAG3Q9UJ98 1225 aa20.54■□□□□ 0.88
PNKP-204ENST00000594661 ASXL1Q8IXJ9 1541 aa20.54■□□□□ 0.88
PNKP-204ENST00000594661 MYBBP1AQ9BQG0 1328 aaKnown RBP20.54■□□□□ 0.88
PNKP-204ENST00000594661 RTN4Q9NQC3 1192 aaKnown RBP20.53■□□□□ 0.88
PNKP-204ENST00000594661 ARHGEF28Q8N1W1 1705 aaKnown RBP20.52■□□□□ 0.88
PNKP-204ENST00000594661 SLC24A1O60721 1099 aa20.51■□□□□ 0.87
PNKP-204ENST00000594661 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
PNKP-204ENST00000594661 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
PNKP-204ENST00000594661 BRD4O60885 1362 aaPredicted RBP20.49■□□□□ 0.87
PNKP-204ENST00000594661 TMC1Q8TDI8 760 aa20.48■□□□□ 0.87
PNKP-204ENST00000594661 PKNOX2Q96KN3 472 aa20.47■□□□□ 0.87
PNKP-204ENST00000594661 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
PNKP-204ENST00000594661 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
PNKP-204ENST00000594661 PNISRQ8TF01 805 aaKnown RBP20.46■□□□□ 0.87
PNKP-204ENST00000594661 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
PNKP-204ENST00000594661 ALKQ9UM73 1620 aa20.46■□□□□ 0.87
PNKP-204ENST00000594661 TNRQ92752 1358 aa20.45■□□□□ 0.86
PNKP-204ENST00000594661 EIF5BO60841 1220 aaKnown RBP20.45■□□□□ 0.86
PNKP-204ENST00000594661 KNSTRNQ9Y448 316 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms