RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 KIF16BQ96L93 1317 aa9.21□□□□□ -0.94
LINC00347-202ENST00000594461 CADPSQ9ULU8 1353 aa9.2□□□□□ -0.94
LINC00347-202ENST00000594461 DDX10Q13206 875 aaKnown RBP9.2□□□□□ -0.94
LINC00347-202ENST00000594461 FAM177A1Q8N128 213 aaPredicted RBP9.2□□□□□ -0.94
LINC00347-202ENST00000594461 MRVI1Q9Y6F6 885 aa9.2□□□□□ -0.94
LINC00347-202ENST00000594461 PHLDB1Q86UU1 1377 aa9.2□□□□□ -0.94
LINC00347-202ENST00000594461 MFAP1P55081 439 aaKnown RBP9.2□□□□□ -0.94
LINC00347-202ENST00000594461 DONSONQ9NYP3 566 aa9.2□□□□□ -0.94
LINC00347-202ENST00000594461 KDM4AO75164 1064 aa9.19□□□□□ -0.94
LINC00347-202ENST00000594461 MSNP26038 577 aaKnown RBP9.19□□□□□ -0.94
LINC00347-202ENST00000594461 CTR9Q6PD62 1173 aa9.19□□□□□ -0.94
LINC00347-202ENST00000594461 CALCOCO1Q9P1Z2 691 aa9.19□□□□□ -0.94
LINC00347-202ENST00000594461 ZNF853P0CG23 659 aa9.19□□□□□ -0.94
LINC00347-202ENST00000594461 ARMCX6Q7L4S7 300 aa9.19□□□□□ -0.94
LINC00347-202ENST00000594461 NECTIN2Q92692 538 aa9.19□□□□□ -0.94
LINC00347-202ENST00000594461 CALR3Q96L12 384 aaKnown RBP9.19□□□□□ -0.94
LINC00347-202ENST00000594461 GRPEL1Q9HAV7 217 aa9.19□□□□□ -0.94
LINC00347-202ENST00000594461 KIF1CO43896 1103 aaKnown RBP9.18□□□□□ -0.94
LINC00347-202ENST00000594461 ATP2B3Q16720 1220 aa9.18□□□□□ -0.94
LINC00347-202ENST00000594461 WRNQ14191 1432 aaPredicted RBP eCLIP9.18□□□□□ -0.94
LINC00347-202ENST00000594461 PPP1R15AO75807 674 aaPredicted RBP9.17□□□□□ -0.94
LINC00347-202ENST00000594461 MTA1Q13330 715 aa9.17□□□□□ -0.94
LINC00347-202ENST00000594461 ITFG2Q969R8 447 aa9.17□□□□□ -0.94
LINC00347-202ENST00000594461 CFTRP13569 1480 aa9.17□□□□□ -0.94
LINC00347-202ENST00000594461 TDO2P48775 406 aa9.17□□□□□ -0.94
LINC00347-202ENST00000594461 GABPB1Q06547 395 aaPredicted RBP9.17□□□□□ -0.94
LINC00347-202ENST00000594461 SASS6Q6UVJ0 657 aa9.17□□□□□ -0.94
LINC00347-202ENST00000594461 SIN3AQ96ST3 1273 aa9.17□□□□□ -0.94
LINC00347-202ENST00000594461 BRMS1Q9HCU9 246 aa9.17□□□□□ -0.94
LINC00347-202ENST00000594461 FEZ2Q9UHY8 353 aaPredicted RBP9.17□□□□□ -0.94
LINC00347-202ENST00000594461 NOP2P46087 812 aaKnown RBP9.16□□□□□ -0.94
LINC00347-202ENST00000594461 ANKRD23Q86SG2 305 aa9.16□□□□□ -0.94
LINC00347-202ENST00000594461 ZNF428Q96B54 188 aa9.16□□□□□ -0.94
LINC00347-202ENST00000594461 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
LINC00347-202ENST00000594461 NINLQ9Y2I6 1382 aa9.15□□□□□ -0.94
LINC00347-202ENST00000594461 ZBTB7CA1YPR0 619 aa9.15□□□□□ -0.95
LINC00347-202ENST00000594461 DNAJC14Q6Y2X3 702 aaPredicted RBP9.15□□□□□ -0.95
LINC00347-202ENST00000594461 EXOC8Q8IYI6 725 aa9.15□□□□□ -0.95
LINC00347-202ENST00000594461 MPHOSPH10O00566 681 aaKnown RBP9.14□□□□□ -0.95
LINC00347-202ENST00000594461 ICE2Q659A1 982 aa9.14□□□□□ -0.95
LINC00347-202ENST00000594461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00347-202ENST00000594461 MNS1Q8NEH6 495 aa9.14□□□□□ -0.95
LINC00347-202ENST00000594461 FANCD2Q9BXW9 1451 aa9.14□□□□□ -0.95
LINC00347-202ENST00000594461 IPO8O15397 1037 aaKnown RBP9.14□□□□□ -0.95
LINC00347-202ENST00000594461 CALRP27797 417 aaKnown RBP9.14□□□□□ -0.95
LINC00347-202ENST00000594461 BECN1Q14457 450 aa9.14□□□□□ -0.95
LINC00347-202ENST00000594461 SLC26A8Q96RN1 970 aa9.14□□□□□ -0.95
LINC00347-202ENST00000594461 NRDCO43847 1150 aa9.13□□□□□ -0.95
LINC00347-202ENST00000594461 GUCY2CP25092 1073 aa9.13□□□□□ -0.95
LINC00347-202ENST00000594461 FOXD4L6Q3SYB3 417 aaPredicted RBP9.13□□□□□ -0.95
LINC00347-202ENST00000594461 FOXD4L3Q6VB84 417 aaPredicted RBP9.13□□□□□ -0.95
LINC00347-202ENST00000594461 MED4Q9NPJ6 270 aa9.13□□□□□ -0.95
LINC00347-202ENST00000594461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINC00347-202ENST00000594461 DHX16O60231 1041 aaKnown RBP9.13□□□□□ -0.95
LINC00347-202ENST00000594461 CT47B1P0C2W7 299 aaPredicted RBP9.13□□□□□ -0.95
LINC00347-202ENST00000594461 CCDC189A1A4V9 331 aa9.12□□□□□ -0.95
LINC00347-202ENST00000594461 POLD1P28340 1107 aa9.12□□□□□ -0.95
LINC00347-202ENST00000594461 CCDC173Q0VFZ6 552 aa9.12□□□□□ -0.95
LINC00347-202ENST00000594461 HDAC1Q13547 482 aaPredicted RBP9.12□□□□□ -0.95
LINC00347-202ENST00000594461 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
LINC00347-202ENST00000594461 FAM210AQ96ND0 272 aa9.12□□□□□ -0.95
LINC00347-202ENST00000594461 TSPAN18Q96SJ8 248 aa9.12□□□□□ -0.95
LINC00347-202ENST00000594461 KIF21AQ7Z4S6 1674 aa9.12□□□□□ -0.95
LINC00347-202ENST00000594461 RSPH14Q9UHP6 348 aa9.12□□□□□ -0.95
LINC00347-202ENST00000594461 SYNJ1O43426 1573 aa9.11□□□□□ -0.95
LINC00347-202ENST00000594461 PPP1R12AO14974 1030 aaPredicted RBP9.11□□□□□ -0.95
LINC00347-202ENST00000594461 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
LINC00347-202ENST00000594461 DNAJC21Q5F1R6 531 aaKnown RBP9.11□□□□□ -0.95
LINC00347-202ENST00000594461 LRCH2Q5VUJ6 765 aa9.11□□□□□ -0.95
LINC00347-202ENST00000594461 PPP1R9BQ96SB3 815 aa9.11□□□□□ -0.95
LINC00347-202ENST00000594461 PAIP2Q9BPZ3 127 aaKnown RBP9.11□□□□□ -0.95
LINC00347-202ENST00000594461 NBPF3Q9H094 633 aa9.11□□□□□ -0.95
LINC00347-202ENST00000594461 ERCC6Q03468 1493 aa9.11□□□□□ -0.95
LINC00347-202ENST00000594461 RNF123Q5XPI4 1314 aa9.11□□□□□ -0.95
LINC00347-202ENST00000594461 KLHL33A6NCF5 533 aa9.1□□□□□ -0.95
LINC00347-202ENST00000594461 FBLN2P98095 1184 aa9.1□□□□□ -0.95
LINC00347-202ENST00000594461 PIAS4Q8N2W9 510 aaPredicted RBP9.1□□□□□ -0.95
LINC00347-202ENST00000594461 HS1BP3Q53T59 392 aa9.1□□□□□ -0.95
LINC00347-202ENST00000594461 ZNF710Q8N1W2 664 aa9.1□□□□□ -0.95
LINC00347-202ENST00000594461 LAMC3Q9Y6N6 1575 aa9.1□□□□□ -0.95
LINC00347-202ENST00000594461 SLFN14P0C7P3 912 aa9.09□□□□□ -0.95
LINC00347-202ENST00000594461 HNRNPUL2Q1KMD3 747 aaKnown RBP9.09□□□□□ -0.95
LINC00347-202ENST00000594461 MYRIPQ8NFW9 859 aa9.09□□□□□ -0.95
LINC00347-202ENST00000594461 FEZ1Q99689 392 aa9.09□□□□□ -0.95
LINC00347-202ENST00000594461 SUFUQ9UMX1 484 aa9.09□□□□□ -0.95
LINC00347-202ENST00000594461 SPDYE4A6NLX3 237 aa9.09□□□□□ -0.95
LINC00347-202ENST00000594461 BIRC2Q13490 618 aa9.09□□□□□ -0.95
LINC00347-202ENST00000594461 ARHGEF1Q92888 912 aaKnown RBP9.09□□□□□ -0.95
LINC00347-202ENST00000594461 UPF2Q9HAU5 1272 aaKnown RBP9.09□□□□□ -0.95
LINC00347-202ENST00000594461 SPINK5Q9NQ38 1064 aaPredicted RBP9.09□□□□□ -0.95
LINC00347-202ENST00000594461 KIF3CO14782 793 aa9.08□□□□□ -0.96
LINC00347-202ENST00000594461 MKL1Q969V6 931 aa9.08□□□□□ -0.96
LINC00347-202ENST00000594461 CEP164Q9UPV0 1460 aa9.08□□□□□ -0.96
LINC00347-202ENST00000594461 CUX1P39880 1505 aa9.08□□□□□ -0.96
LINC00347-202ENST00000594461 GZF1Q9H116 711 aaPredicted RBP9.08□□□□□ -0.96
LINC00347-202ENST00000594461 PDS5BQ9NTI5 1447 aa9.07□□□□□ -0.96
LINC00347-202ENST00000594461 TNNT1P13805 278 aa9.07□□□□□ -0.96
LINC00347-202ENST00000594461 MYBPC2Q14324 1141 aa9.07□□□□□ -0.96
LINC00347-202ENST00000594461 SPTY2D1Q68D10 685 aaPredicted RBP9.07□□□□□ -0.96
LINC00347-202ENST00000594461 JMYQ8N9B5 988 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms