RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 CDK12Q9NYV4 1490 aaPredicted RBP19.43■□□□□ 0.7
IRF3-206ENST00000593818 MYO5BQ9ULV0 1848 aa19.43■□□□□ 0.7
IRF3-206ENST00000593818 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
IRF3-206ENST00000593818 NCOA3Q9Y6Q9 1424 aa19.42■□□□□ 0.7
IRF3-206ENST00000593818 STAG3Q9UJ98 1225 aa19.41■□□□□ 0.7
IRF3-206ENST00000593818 ABCC5O15440 1437 aa19.41■□□□□ 0.7
IRF3-206ENST00000593818 DIP2AQ14689 1571 aa19.4■□□□□ 0.7
IRF3-206ENST00000593818 SRCAPQ6ZRS2 3230 aa19.4■□□□□ 0.7
IRF3-206ENST00000593818 ZNF772Q68DY9 489 aaPredicted RBP19.4■□□□□ 0.7
IRF3-206ENST00000593818 KANK1Q14678 1352 aa19.4■□□□□ 0.7
IRF3-206ENST00000593818 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.39■□□□□ 0.7
IRF3-206ENST00000593818 GCC2Q8IWJ2 1684 aa19.38■□□□□ 0.69
IRF3-206ENST00000593818 PLEKHG1Q9ULL1 1385 aa19.38■□□□□ 0.69
IRF3-206ENST00000593818 PTPN23Q9H3S7 1636 aa19.37■□□□□ 0.69
IRF3-206ENST00000593818 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
IRF3-206ENST00000593818 TMEM131LA2VDJ0 1609 aa19.35■□□□□ 0.69
IRF3-206ENST00000593818 DAPK1P53355 1430 aa19.34■□□□□ 0.69
IRF3-206ENST00000593818 TRIM52Q96A61 297 aa19.33■□□□□ 0.68
IRF3-206ENST00000593818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.685e-6■■■□□ 18.6
IRF3-206ENST00000593818 RRP7BPQ9NSQ0 103 aa19.33■□□□□ 0.68
IRF3-206ENST00000593818 SLC52A1Q9NWF4 448 aa19.33■□□□□ 0.68
IRF3-206ENST00000593818 KANK4Q5T7N3 995 aaPredicted RBP19.31■□□□□ 0.68
IRF3-206ENST00000593818 MEX3CQ5U5Q3 659 aaKnown RBP19.31■□□□□ 0.68
IRF3-206ENST00000593818 NHSL1Q5SYE7 1610 aa19.3■□□□□ 0.68
IRF3-206ENST00000593818 RIMS2Q9UQ26 1411 aa19.3■□□□□ 0.68
IRF3-206ENST00000593818 ADAMTS13Q76LX8 1427 aa19.29■□□□□ 0.68
IRF3-206ENST00000593818 RXRBP28702 533 aa19.29■□□□□ 0.68
IRF3-206ENST00000593818 TBX22Q9Y458 520 aa19.28■□□□□ 0.68
IRF3-206ENST00000593818 CADPS2Q86UW7 1296 aa19.27■□□□□ 0.68
IRF3-206ENST00000593818 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
IRF3-206ENST00000593818 ANKRD30AQ9BXX3 1397 aa19.27■□□□□ 0.68
IRF3-206ENST00000593818 RGS12O14924 1447 aa19.26■□□□□ 0.67
IRF3-206ENST00000593818 DCCP43146 1447 aa19.26■□□□□ 0.67
IRF3-206ENST00000593818 ADGRL2O95490 1459 aa19.26■□□□□ 0.67
IRF3-206ENST00000593818 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
IRF3-206ENST00000593818 ASXL1Q8IXJ9 1541 aa19.25■□□□□ 0.67
IRF3-206ENST00000593818 C19orf44Q9H6X5 657 aa19.25■□□□□ 0.67
IRF3-206ENST00000593818 BCANQ96GW7 911 aa19.24■□□□□ 0.67
IRF3-206ENST00000593818 XRN1Q8IZH2 1706 aaKnown RBP19.23■□□□□ 0.67
IRF3-206ENST00000593818 APLP2Q06481 763 aa19.23■□□□□ 0.67
IRF3-206ENST00000593818 TRPM2O94759 1503 aa19.23■□□□□ 0.67
IRF3-206ENST00000593818 BRINP3Q76B58 766 aa19.22■□□□□ 0.67
IRF3-206ENST00000593818 AFF2P51816 1311 aa19.22■□□□□ 0.67
IRF3-206ENST00000593818 UNC13BO14795 1591 aa19.21■□□□□ 0.67
IRF3-206ENST00000593818 PPP1R15AO75807 674 aaPredicted RBP19.2■□□□□ 0.66
IRF3-206ENST00000593818 ATF3P18847 181 aa19.2■□□□□ 0.66
IRF3-206ENST00000593818 HDGFP51858 240 aaKnown RBP19.2■□□□□ 0.66
IRF3-206ENST00000593818 C14orf37Q86TY3 774 aa19.19■□□□□ 0.66
IRF3-206ENST00000593818 NRXN3Q9Y4C0 1643 aa19.18■□□□□ 0.66
IRF3-206ENST00000593818 MST1RQ04912 1400 aa19.18■□□□□ 0.66
IRF3-206ENST00000593818 E9PCH4 1651 aa19.18■□□□□ 0.66
IRF3-206ENST00000593818 PTPRUQ92729 1446 aa19.17■□□□□ 0.66
IRF3-206ENST00000593818 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.17■□□□□ 0.66
IRF3-206ENST00000593818 LAMC1P11047 1609 aa19.17■□□□□ 0.66
IRF3-206ENST00000593818 EP400Q96L91 3159 aa19.15■□□□□ 0.66
IRF3-206ENST00000593818 NUTM2BA6NNL0 878 aaPredicted RBP19.15■□□□□ 0.66
IRF3-206ENST00000593818 NUTM2EB1AL46 878 aaPredicted RBP19.15■□□□□ 0.66
IRF3-206ENST00000593818 RBM6P78332 1123 aaKnown RBP19.15■□□□□ 0.66
IRF3-206ENST00000593818 NUTM2AQ8IVF1 878 aaPredicted RBP19.15■□□□□ 0.66
IRF3-206ENST00000593818 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
IRF3-206ENST00000593818 ANKRD50Q9ULJ7 1429 aa19.14■□□□□ 0.65
IRF3-206ENST00000593818 SETBP1Q9Y6X0 1596 aa19.14■□□□□ 0.65
IRF3-206ENST00000593818 CHIC2Q9UKJ5 165 aa19.13■□□□□ 0.65
IRF3-206ENST00000593818 IQGAP3Q86VI3 1631 aa19.13■□□□□ 0.65
IRF3-206ENST00000593818 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
IRF3-206ENST00000593818 PPARGC1BQ86YN6 1023 aaKnown RBP19.11■□□□□ 0.65
IRF3-206ENST00000593818 ATAD2Q6PL18 1390 aa19.1■□□□□ 0.65
IRF3-206ENST00000593818 AMOTL2Q9Y2J4 779 aa19.1■□□□□ 0.65
IRF3-206ENST00000593818 LRRC59Q96AG4 307 aaKnown RBP19.09■□□□□ 0.65
IRF3-206ENST00000593818 QTRT2Q9H974 415 aaKnown RBP19.09■□□□□ 0.65
IRF3-206ENST00000593818 C8orf37Q96NL8 207 aa19.08■□□□□ 0.64
IRF3-206ENST00000593818 ADGRL3Q9HAR2 1447 aa19.08■□□□□ 0.64
IRF3-206ENST00000593818 COL22A1Q8NFW1 1626 aaPredicted RBP19.05■□□□□ 0.64
IRF3-206ENST00000593818 NUTM2DQ5VT03 806 aaPredicted RBP19.05■□□□□ 0.64
IRF3-206ENST00000593818 NGLY1Q96IV0 654 aa19.04■□□□□ 0.64
IRF3-206ENST00000593818 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
IRF3-206ENST00000593818 ATRNO75882 1429 aa19.01■□□□□ 0.63
IRF3-206ENST00000593818 PTCH1Q13635 1447 aa19.01■□□□□ 0.63
IRF3-206ENST00000593818 SPHKAPQ2M3C7 1700 aa19■□□□□ 0.63
IRF3-206ENST00000593818 MARF1Q9Y4F3 1742 aaKnown RBP19■□□□□ 0.63
IRF3-206ENST00000593818 C1orf167Q5SNV9 1468 aa18.99■□□□□ 0.63
IRF3-206ENST00000593818 METP08581 1390 aa18.99■□□□□ 0.63
IRF3-206ENST00000593818 FOXD1Q16676 465 aa18.99■□□□□ 0.63
IRF3-206ENST00000593818 DDX17Q92841 729 aaKnown RBP18.99■□□□□ 0.63
IRF3-206ENST00000593818 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
IRF3-206ENST00000593818 FNBP4Q8N3X1 1017 aaPredicted RBP18.97■□□□□ 0.63
IRF3-206ENST00000593818 TRPC5Q9UL62 973 aaPredicted RBP18.97■□□□□ 0.63
IRF3-206ENST00000593818 SOS2Q07890 1332 aaPredicted RBP18.97■□□□□ 0.63
IRF3-206ENST00000593818 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
IRF3-206ENST00000593818 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
IRF3-206ENST00000593818 PRAG1Q86YV5 1406 aa18.95■□□□□ 0.62
IRF3-206ENST00000593818 ADAMTS2O95450 1211 aa18.95■□□□□ 0.62
IRF3-206ENST00000593818 USP21Q9UK80 565 aa18.95■□□□□ 0.62
IRF3-206ENST00000593818 LRP5O75197 1615 aa18.95■□□□□ 0.62
IRF3-206ENST00000593818 MYOM2P54296 1465 aa18.95■□□□□ 0.62
IRF3-206ENST00000593818 CCDC125Q86Z20 511 aa18.94■□□□□ 0.62
IRF3-206ENST00000593818 ROCK1Q13464 1354 aa18.93■□□□□ 0.62
IRF3-206ENST00000593818 BCL9LQ86UU0 1499 aa18.91■□□□□ 0.62
IRF3-206ENST00000593818 CLTCL1P53675 1640 aa18.89■□□□□ 0.61
IRF3-206ENST00000593818 FAM50AQ14320 339 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms