RNA–Protein interactions for RNA: ENST00000593174.5

CCDC130-212, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,783 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-212ENST00000593174 PLPPR3Q6T4P5 718 aa23.83■■□□□ 1.4
CCDC130-212ENST00000593174 STAG3Q9UJ98 1225 aa23.83■■□□□ 1.4
CCDC130-212ENST00000593174 MYOM2P54296 1465 aa23.82■■□□□ 1.4
CCDC130-212ENST00000593174 EIF4G2P78344 907 aaKnown RBP eCLIP23.81■■□□□ 1.4
CCDC130-212ENST00000593174 HIRIP3Q9BW71 556 aaPredicted RBP23.81■■□□□ 1.4
CCDC130-212ENST00000593174 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
CCDC130-212ENST00000593174 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
CCDC130-212ENST00000593174 ROCK2O75116 1388 aaKnown RBP23.79■■□□□ 1.4
CCDC130-212ENST00000593174 CARD11Q9BXL7 1154 aa23.78■■□□□ 1.4
CCDC130-212ENST00000593174 NEXMIFQ5QGS0 1516 aa23.78■■□□□ 1.4
CCDC130-212ENST00000593174 NBPF1Q3BBV0 1214 aa23.77■■□□□ 1.4
CCDC130-212ENST00000593174 YTHDC1Q96MU7 727 aaKnown RBP23.77■■□□□ 1.4
CCDC130-212ENST00000593174 A2ML1A8K2U0 1454 aa23.76■■□□□ 1.39
CCDC130-212ENST00000593174 NRXN1Q9ULB1 1477 aa23.74■■□□□ 1.39
CCDC130-212ENST00000593174 VGFO15240 615 aaPredicted RBP23.74■■□□□ 1.39
CCDC130-212ENST00000593174 NUTM2DQ5VT03 806 aaPredicted RBP23.74■■□□□ 1.39
CCDC130-212ENST00000593174 GPRASP1Q5JY77 1395 aa23.73■■□□□ 1.39
CCDC130-212ENST00000593174 NLRP1Q9C000 1473 aa23.73■■□□□ 1.39
CCDC130-212ENST00000593174 KIAA1210Q9ULL0 1709 aa23.72■■□□□ 1.39
CCDC130-212ENST00000593174 USP47Q96K76 1375 aa23.72■■□□□ 1.39
CCDC130-212ENST00000593174 LAMC1P11047 1609 aa23.7■■□□□ 1.39
CCDC130-212ENST00000593174 KDM5AP29375 1690 aaKnown RBP23.7■■□□□ 1.38
CCDC130-212ENST00000593174 ZFYVE9O95405 1425 aa23.7■■□□□ 1.38
CCDC130-212ENST00000593174 CFAP70Q5T0N1 1121 aa23.69■■□□□ 1.38
CCDC130-212ENST00000593174 UBR1Q8IWV7 1749 aa23.69■■□□□ 1.38
CCDC130-212ENST00000593174 PIK3C2GO75747 1445 aa23.68■■□□□ 1.38
CCDC130-212ENST00000593174 RIMS2Q9UQ26 1411 aa23.67■■□□□ 1.38
CCDC130-212ENST00000593174 C14orf93Q9H972 538 aaKnown RBP23.65■■□□□ 1.38
CCDC130-212ENST00000593174 MYO3AQ8NEV4 1616 aa23.64■■□□□ 1.38
CCDC130-212ENST00000593174 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.63■■□□□ 1.37
CCDC130-212ENST00000593174 SETD1BQ9UPS6 1966 aaKnown RBP23.62■■□□□ 1.37
CCDC130-212ENST00000593174 PTPRMP28827 1452 aa23.61■■□□□ 1.37
CCDC130-212ENST00000593174 HDGFP51858 240 aaKnown RBP23.61■■□□□ 1.37
CCDC130-212ENST00000593174 TMEM2Q9UHN6 1383 aa23.61■■□□□ 1.37
CCDC130-212ENST00000593174 ST20-MTHFSA0A0A6YYL1 179 aa23.6■■□□□ 1.37
CCDC130-212ENST00000593174 SENP3Q9H4L4 574 aaPredicted RBP23.6■■□□□ 1.37
CCDC130-212ENST00000593174 IQGAP1P46940 1657 aa23.59■■□□□ 1.37
CCDC130-212ENST00000593174 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
CCDC130-212ENST00000593174 SCAF11Q99590 1463 aaKnown RBP23.58■■□□□ 1.37
CCDC130-212ENST00000593174 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
CCDC130-212ENST00000593174 CEP170BQ9Y4F5 1589 aaPredicted RBP23.56■■□□□ 1.36
CCDC130-212ENST00000593174 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
CCDC130-212ENST00000593174 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
CCDC130-212ENST00000593174 C11orf95C9JLR9 678 aaPredicted RBP23.55■■□□□ 1.36
CCDC130-212ENST00000593174 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
CCDC130-212ENST00000593174 WASHC2AQ641Q2 1341 aa23.54■■□□□ 1.36
CCDC130-212ENST00000593174 ALKQ9UM73 1620 aa23.52■■□□□ 1.36
CCDC130-212ENST00000593174 SLIT1O75093 1534 aa23.52■■□□□ 1.36
CCDC130-212ENST00000593174 POLR1AO95602 1720 aaPredicted RBP23.52■■□□□ 1.36
CCDC130-212ENST00000593174 DDX10Q13206 875 aaKnown RBP23.52■■□□□ 1.36
CCDC130-212ENST00000593174 EID1Q9Y6B2 187 aa23.52■■□□□ 1.36
CCDC130-212ENST00000593174 ZNF142P52746 1687 aaPredicted RBP23.52■■□□□ 1.36
CCDC130-212ENST00000593174 ARHGAP23Q9P227 1491 aa23.51■■□□□ 1.35
CCDC130-212ENST00000593174 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
CCDC130-212ENST00000593174 TXNDC2Q86VQ3 553 aa23.51■■□□□ 1.35
CCDC130-212ENST00000593174 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
CCDC130-212ENST00000593174 LTKP29376 864 aa23.5■■□□□ 1.35
CCDC130-212ENST00000593174 BCANQ96GW7 911 aa23.49■■□□□ 1.35
CCDC130-212ENST00000593174 TRAK1Q9UPV9 953 aa23.48■■□□□ 1.35
CCDC130-212ENST00000593174 KIF7Q2M1P5 1343 aa23.48■■□□□ 1.35
CCDC130-212ENST00000593174 ASXL1Q8IXJ9 1541 aa23.48■■□□□ 1.35
CCDC130-212ENST00000593174 TESK2Q96S53 571 aa23.47■■□□□ 1.35
CCDC130-212ENST00000593174 NRXN3Q9Y4C0 1643 aa23.47■■□□□ 1.35
CCDC130-212ENST00000593174 KDM4FA0A1W2PPD8 638 aa23.47■■□□□ 1.35
CCDC130-212ENST00000593174 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
CCDC130-212ENST00000593174 SETD1AO15047 1707 aaKnown RBP23.45■■□□□ 1.34
CCDC130-212ENST00000593174 STK26Q9P289 416 aa23.44■■□□□ 1.34
CCDC130-212ENST00000593174 POLR3GLQ9BT43 218 aa23.43■■□□□ 1.34
CCDC130-212ENST00000593174 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
CCDC130-212ENST00000593174 TMF1P82094 1093 aa23.41■■□□□ 1.34
CCDC130-212ENST00000593174 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
CCDC130-212ENST00000593174 ARHGEF28Q8N1W1 1705 aaKnown RBP23.4■■□□□ 1.34
CCDC130-212ENST00000593174 ANKLE2Q86XL3 938 aa23.39■■□□□ 1.33
CCDC130-212ENST00000593174 ADAMTS13Q76LX8 1427 aa23.39■■□□□ 1.33
CCDC130-212ENST00000593174 DISP3Q9P2K9 1392 aa23.39■■□□□ 1.33
CCDC130-212ENST00000593174 METP08581 1390 aa23.38■■□□□ 1.33
CCDC130-212ENST00000593174 LRPPRCP42704 1394 aaKnown RBP23.37■■□□□ 1.33
CCDC130-212ENST00000593174 QRICH2Q9H0J4 1663 aa23.36■■□□□ 1.33
CCDC130-212ENST00000593174 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
CCDC130-212ENST00000593174 SLC26A8Q96RN1 970 aa23.35■■□□□ 1.33
CCDC130-212ENST00000593174 MED14O60244 1454 aa23.34■■□□□ 1.33
CCDC130-212ENST00000593174 SBNO2Q9Y2G9 1366 aa23.33■■□□□ 1.33
CCDC130-212ENST00000593174 ABCC11Q96J66 1382 aa23.33■■□□□ 1.32
CCDC130-212ENST00000593174 TBX22Q9Y458 520 aa23.32■■□□□ 1.32
CCDC130-212ENST00000593174 CDCA8Q53HL2 280 aa23.32■■□□□ 1.32
CCDC130-212ENST00000593174 POGKQ9P215 609 aa23.32■■□□□ 1.32
CCDC130-212ENST00000593174 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
CCDC130-212ENST00000593174 DLC1Q96QB1 1528 aa23.31■■□□□ 1.32
CCDC130-212ENST00000593174 CCER2I3L3R5 266 aa23.3■■□□□ 1.32
CCDC130-212ENST00000593174 SAFB2Q14151 953 aaKnown RBP eCLIP23.3■■□□□ 1.32
CCDC130-212ENST00000593174 DIP2AQ14689 1571 aa23.3■■□□□ 1.32
CCDC130-212ENST00000593174 KNDC1Q76NI1 1749 aa23.28■■□□□ 1.32
CCDC130-212ENST00000593174 NCKAP5LQ9HCH0 1330 aa23.25■■□□□ 1.31
CCDC130-212ENST00000593174 WAPLQ7Z5K2 1190 aa23.25■■□□□ 1.31
CCDC130-212ENST00000593174 TECPR2O15040 1411 aa23.25■■□□□ 1.31
CCDC130-212ENST00000593174 ANP32CO43423 234 aa23.24■■□□□ 1.31
CCDC130-212ENST00000593174 SIRT1Q96EB6 747 aa23.24■■□□□ 1.31
CCDC130-212ENST00000593174 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
CCDC130-212ENST00000593174 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
CCDC130-212ENST00000593174 MINK1Q8N4C8 1332 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms