RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-218ENST00000592991 UBR1Q8IWV7 1749 aa36.33■■■■□ 3.41
LDLRAD4-218ENST00000592991 MYO3AQ8NEV4 1616 aa36.32■■■■□ 3.41
LDLRAD4-218ENST00000592991 HIRIP3Q9BW71 556 aaPredicted RBP36.32■■■■□ 3.4
LDLRAD4-218ENST00000592991 NLRP1Q9C000 1473 aa36.31■■■■□ 3.4
LDLRAD4-218ENST00000592991 NRXN1Q9ULB1 1477 aa36.3■■■■□ 3.4
LDLRAD4-218ENST00000592991 PTPRMP28827 1452 aa36.29■■■■□ 3.4
LDLRAD4-218ENST00000592991 NBPF1Q3BBV0 1214 aa36.29■■■■□ 3.4
LDLRAD4-218ENST00000592991 STAC3Q96MF2 364 aa36.29■■■■□ 3.4
LDLRAD4-218ENST00000592991 ROCK2O75116 1388 aaKnown RBP36.28■■■■□ 3.4
LDLRAD4-218ENST00000592991 KDM5AP29375 1690 aaKnown RBP36.25■■■■□ 3.39
LDLRAD4-218ENST00000592991 SENP3Q9H4L4 574 aaPredicted RBP36.24■■■■□ 3.39
LDLRAD4-218ENST00000592991 CARD11Q9BXL7 1154 aa36.23■■■■□ 3.39
LDLRAD4-218ENST00000592991 PIK3C2GO75747 1445 aa36.22■■■■□ 3.39
LDLRAD4-218ENST00000592991 RIMS2Q9UQ26 1411 aa36.22■■■■□ 3.39
LDLRAD4-218ENST00000592991 HSPA5P11021 654 aaKnown RBP36.22■■■■□ 3.39
LDLRAD4-218ENST00000592991 CFAP70Q5T0N1 1121 aa36.19■■■■□ 3.38
LDLRAD4-218ENST00000592991 KIAA1210Q9ULL0 1709 aa36.19■■■■□ 3.38
LDLRAD4-218ENST00000592991 VGFO15240 615 aaPredicted RBP36.19■■■■□ 3.38
LDLRAD4-218ENST00000592991 EIF4G2P78344 907 aaKnown RBP eCLIP36.19■■■■□ 3.38
LDLRAD4-218ENST00000592991 ZFYVE9O95405 1425 aa36.18■■■■□ 3.38
LDLRAD4-218ENST00000592991 GPRASP1Q5JY77 1395 aa36.17■■■■□ 3.38
LDLRAD4-218ENST00000592991 CEP170BQ9Y4F5 1589 aaPredicted RBP36.17■■■■□ 3.38
LDLRAD4-218ENST00000592991 USP47Q96K76 1375 aa36.17■■■■□ 3.38
LDLRAD4-218ENST00000592991 LAMC1P11047 1609 aa36.14■■■■□ 3.38
LDLRAD4-218ENST00000592991 KDM4FA0A1W2PPD8 638 aa36.13■■■■□ 3.37
LDLRAD4-218ENST00000592991 TMEM2Q9UHN6 1383 aa36.13■■■■□ 3.37
LDLRAD4-218ENST00000592991 SETD1BQ9UPS6 1966 aaKnown RBP36.12■■■■□ 3.37
LDLRAD4-218ENST00000592991 ZNF142P52746 1687 aaPredicted RBP36.1■■■■□ 3.37
LDLRAD4-218ENST00000592991 C14orf93Q9H972 538 aaKnown RBP36.08■■■■□ 3.37
LDLRAD4-218ENST00000592991 IQGAP1P46940 1657 aa36.06■■■■□ 3.36
LDLRAD4-218ENST00000592991 SLIT1O75093 1534 aa36.03■■■■□ 3.36
LDLRAD4-218ENST00000592991 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.03■■■■□ 3.36
LDLRAD4-218ENST00000592991 ARHGAP23Q9P227 1491 aa36.03■■■■□ 3.36
LDLRAD4-218ENST00000592991 ADGRB1O14514 1584 aa36.03■■■■□ 3.36
LDLRAD4-218ENST00000592991 SETBP1Q9Y6X0 1596 aa36.02■■■■□ 3.36
LDLRAD4-218ENST00000592991 LTKP29376 864 aa36.01■■■■□ 3.36
LDLRAD4-218ENST00000592991 THEMISQ8N1K5 641 aaPredicted RBP36.01■■■■□ 3.36
LDLRAD4-218ENST00000592991 NRXN3Q9Y4C0 1643 aa36.01■■■■□ 3.36
LDLRAD4-218ENST00000592991 TMEM132EQ6IEE7 984 aa36.01■■■■□ 3.35
LDLRAD4-218ENST00000592991 ASXL1Q8IXJ9 1541 aa36■■■■□ 3.35
LDLRAD4-218ENST00000592991 ALKQ9UM73 1620 aa36■■■■□ 3.35
LDLRAD4-218ENST00000592991 ST20-MTHFSA0A0A6YYL1 179 aa35.98■■■■□ 3.35
LDLRAD4-218ENST00000592991 SCAF11Q99590 1463 aaKnown RBP35.98■■■■□ 3.35
LDLRAD4-218ENST00000592991 TXNDC2Q86VQ3 553 aa35.97■■■■□ 3.35
LDLRAD4-218ENST00000592991 HDGFP51858 240 aaKnown RBP35.96■■■■□ 3.35
LDLRAD4-218ENST00000592991 SETD1AO15047 1707 aaKnown RBP35.96■■■■□ 3.35
LDLRAD4-218ENST00000592991 EID1Q9Y6B2 187 aa35.92■■■■□ 3.34
LDLRAD4-218ENST00000592991 C11orf95C9JLR9 678 aaPredicted RBP35.91■■■■□ 3.34
LDLRAD4-218ENST00000592991 BCANQ96GW7 911 aa35.9■■■■□ 3.34
LDLRAD4-218ENST00000592991 PLEKHG1Q9ULL1 1385 aa35.88■■■■□ 3.33
LDLRAD4-218ENST00000592991 TRAK1Q9UPV9 953 aa35.86■■■■□ 3.33
LDLRAD4-218ENST00000592991 WASHC2AQ641Q2 1341 aa35.85■■■■□ 3.33
LDLRAD4-218ENST00000592991 ADAMTS13Q76LX8 1427 aa35.84■■■■□ 3.33
LDLRAD4-218ENST00000592991 STK26Q9P289 416 aa35.83■■■■□ 3.33
LDLRAD4-218ENST00000592991 POLR1AO95602 1720 aaPredicted RBP35.82■■■■□ 3.33
LDLRAD4-218ENST00000592991 EIF3AQ14152 1382 aaKnown RBP35.82■■■■□ 3.32
LDLRAD4-218ENST00000592991 ARHGEF28Q8N1W1 1705 aaKnown RBP35.82■■■■□ 3.32
LDLRAD4-218ENST00000592991 YTHDC2Q9H6S0 1430 aaKnown RBP35.8■■■■□ 3.32
LDLRAD4-218ENST00000592991 METP08581 1390 aa35.8■■■■□ 3.32
LDLRAD4-218ENST00000592991 TESK2Q96S53 571 aa35.8■■■■□ 3.32
LDLRAD4-218ENST00000592991 DIEXFQ68CQ4 756 aaKnown RBP35.79■■■■□ 3.32
LDLRAD4-218ENST00000592991 CCDC7Q96M83 1385 aa35.78■■■■□ 3.32
LDLRAD4-218ENST00000592991 KIF7Q2M1P5 1343 aa35.77■■■■□ 3.32
LDLRAD4-218ENST00000592991 SLC26A8Q96RN1 970 aa35.77■■■■□ 3.32
LDLRAD4-218ENST00000592991 ANKLE2Q86XL3 938 aa35.75■■■■□ 3.31
LDLRAD4-218ENST00000592991 DDX10Q13206 875 aaKnown RBP35.75■■■■□ 3.31
LDLRAD4-218ENST00000592991 MED14O60244 1454 aa35.74■■■■□ 3.31
LDLRAD4-218ENST00000592991 QRICH2Q9H0J4 1663 aa35.73■■■■□ 3.31
LDLRAD4-218ENST00000592991 POLR3GLQ9BT43 218 aa35.72■■■■□ 3.31
LDLRAD4-218ENST00000592991 DISP3Q9P2K9 1392 aa35.72■■■■□ 3.31
LDLRAD4-218ENST00000592991 CENPJQ9HC77 1338 aaPredicted RBP35.7■■■■□ 3.31
LDLRAD4-218ENST00000592991 LRPPRCP42704 1394 aaKnown RBP35.7■■■■□ 3.31
LDLRAD4-218ENST00000592991 NCKAP5LQ9HCH0 1330 aa35.68■■■■□ 3.3
LDLRAD4-218ENST00000592991 HSPA2P54652 639 aa35.68■■■■□ 3.3
LDLRAD4-218ENST00000592991 LMTK3Q96Q04 1460 aa35.67■■■■□ 3.3
LDLRAD4-218ENST00000592991 DIP2AQ14689 1571 aa35.66■■■■□ 3.3
LDLRAD4-218ENST00000592991 SAFB2Q14151 953 aaKnown RBP eCLIP35.65■■■■□ 3.3
LDLRAD4-218ENST00000592991 KNDC1Q76NI1 1749 aa35.64■■■■□ 3.3
LDLRAD4-218ENST00000592991 PTPRUQ92729 1446 aa35.63■■■■□ 3.29
LDLRAD4-218ENST00000592991 TMF1P82094 1093 aa35.62■■■■□ 3.29
LDLRAD4-218ENST00000592991 PRAM1Q96QH2 718 aa35.62■■■■□ 3.29
LDLRAD4-218ENST00000592991 TBX22Q9Y458 520 aa35.62■■■■□ 3.29
LDLRAD4-218ENST00000592991 NPHP4O75161 1426 aaPredicted RBP35.62■■■■□ 3.29
LDLRAD4-218ENST00000592991 ABCC11Q96J66 1382 aa35.61■■■■□ 3.29
LDLRAD4-218ENST00000592991 DLC1Q96QB1 1528 aa35.61■■■■□ 3.29
LDLRAD4-218ENST00000592991 PLEKHH1Q9ULM0 1364 aa35.58■■■■□ 3.29
LDLRAD4-218ENST00000592991 SBNO2Q9Y2G9 1366 aa35.58■■■■□ 3.29
LDLRAD4-218ENST00000592991 CPS1P31327 1500 aa35.57■■■■□ 3.28
LDLRAD4-218ENST00000592991 WAPLQ7Z5K2 1190 aa35.57■■■■□ 3.28
LDLRAD4-218ENST00000592991 POGKQ9P215 609 aa35.57■■■■□ 3.28
LDLRAD4-218ENST00000592991 TECPR2O15040 1411 aa35.56■■■■□ 3.28
LDLRAD4-218ENST00000592991 ROBO2Q9HCK4 1378 aa35.53■■■■□ 3.28
LDLRAD4-218ENST00000592991 MINK1Q8N4C8 1332 aaPredicted RBP35.52■■■■□ 3.28
LDLRAD4-218ENST00000592991 TULP4Q9NRJ4 1543 aa35.51■■■■□ 3.27
LDLRAD4-218ENST00000592991 AMOTL2Q9Y2J4 779 aa35.5■■■■□ 3.27
LDLRAD4-218ENST00000592991 XRN1Q8IZH2 1706 aaKnown RBP35.5■■■■□ 3.27
LDLRAD4-218ENST00000592991 CHD2O14647 1828 aaKnown RBP35.46■■■■□ 3.27
LDLRAD4-218ENST00000592991 FAM135BQ49AJ0 1406 aa35.46■■■■□ 3.27
LDLRAD4-218ENST00000592991 PIK3R4Q99570 1358 aa35.45■■■■□ 3.26
LDLRAD4-218ENST00000592991 STRCQ7RTU9 1775 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms