RNA–Protein interactions for RNA: ENST00000592860.2

CFD-202, Transcript of complement factor D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFD, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-202ENST00000592860 SENP3Q9H4L4 574 aaPredicted RBP35.16■■■■□ 3.22
CFD-202ENST00000592860 ILDR2Q71H61 639 aa35.15■■■■□ 3.22
CFD-202ENST00000592860 MYO5BQ9ULV0 1848 aa35.13■■■■□ 3.21
CFD-202ENST00000592860 CHGAP10645 457 aaKnown RBP35.13■■■■□ 3.21
CFD-202ENST00000592860 KCNA6P17658 529 aa35.12■■■■□ 3.21
CFD-202ENST00000592860 PLEKHG1Q9ULL1 1385 aa35.11■■■■□ 3.21
CFD-202ENST00000592860 BCANQ96GW7 911 aa35.1■■■■□ 3.21
CFD-202ENST00000592860 XIRP1Q702N8 1843 aaKnown RBP35.09■■■■□ 3.21
CFD-202ENST00000592860 PPP1R15AO75807 674 aaPredicted RBP35.08■■■■□ 3.21
CFD-202ENST00000592860 TMEM94Q12767 1356 aa35.08■■■■□ 3.21
CFD-202ENST00000592860 NAIPQ13075 1403 aa35.06■■■■□ 3.2
CFD-202ENST00000592860 NWD1Q149M9 1564 aa35.05■■■■□ 3.2
CFD-202ENST00000592860 NUTM2DQ5VT03 806 aaPredicted RBP35.04■■■■□ 3.2
CFD-202ENST00000592860 RBM33Q96EV2 1170 aaKnown RBP35.04■■■■□ 3.2
CFD-202ENST00000592860 HDGFP51858 240 aaKnown RBP35.03■■■■□ 3.2
CFD-202ENST00000592860 PROSER2Q86WR7 435 aaPredicted RBP35.01■■■■□ 3.2
CFD-202ENST00000592860 NKTRP30414 1462 aaKnown RBP35.01■■■■□ 3.19
CFD-202ENST00000592860 ABCF1Q8NE71 845 aaKnown RBP eCLIP35■■■■□ 3.19
CFD-202ENST00000592860 ADAMTS13Q76LX8 1427 aa34.96■■■■□ 3.19
CFD-202ENST00000592860 MED1Q15648 1581 aaPredicted RBP34.95■■■■□ 3.18
CFD-202ENST00000592860 TBX22Q9Y458 520 aa34.94■■■■□ 3.18
CFD-202ENST00000592860 SPHKAPQ2M3C7 1700 aa34.94■■■■□ 3.18
CFD-202ENST00000592860 HFM1A2PYH4 1435 aa34.93■■■■□ 3.18
CFD-202ENST00000592860 CHD2O14647 1828 aaKnown RBP34.88■■■■□ 3.17
CFD-202ENST00000592860 FAM135BQ49AJ0 1406 aa34.87■■■■□ 3.17
CFD-202ENST00000592860 DIP2AQ14689 1571 aa34.86■■■■□ 3.17
CFD-202ENST00000592860 TRPM2O94759 1503 aa34.85■■■■□ 3.17
CFD-202ENST00000592860 CLTCL1P53675 1640 aa34.84■■■■□ 3.17
CFD-202ENST00000592860 MSH6P52701 1360 aa34.84■■■■□ 3.17
CFD-202ENST00000592860 TRIM52Q96A61 297 aa34.83■■■■□ 3.17
CFD-202ENST00000592860 SOCS7O14512 581 aa34.81■■■■□ 3.16
CFD-202ENST00000592860 ZNF326Q5BKZ1 582 aaKnown RBP34.81■■■■□ 3.16
CFD-202ENST00000592860 PIK3R4Q99570 1358 aa34.8■■■■□ 3.16
CFD-202ENST00000592860 PTPRUQ92729 1446 aa34.78■■■■□ 3.16
CFD-202ENST00000592860 NRXN3Q9Y4C0 1643 aa34.77■■■■□ 3.16
CFD-202ENST00000592860 ROBO1Q9Y6N7 1651 aa34.76■■■■□ 3.16
CFD-202ENST00000592860 SETBP1Q9Y6X0 1596 aa34.75■■■■□ 3.15
CFD-202ENST00000592860 NEXMIFQ5QGS0 1516 aa34.73■■■■□ 3.15
CFD-202ENST00000592860 SLC4A1APQ9BWU0 796 aaKnown RBP34.73■■■■□ 3.15
CFD-202ENST00000592860 NCOA3Q9Y6Q9 1424 aa34.72■■■■□ 3.15
CFD-202ENST00000592860 AMOTL2Q9Y2J4 779 aa34.72■■■■□ 3.15
CFD-202ENST00000592860 SLAIN2Q9P270 581 aa34.71■■■■□ 3.15
CFD-202ENST00000592860 C14orf37Q86TY3 774 aa34.68■■■■□ 3.14
CFD-202ENST00000592860 METP08581 1390 aa34.67■■■■□ 3.14
CFD-202ENST00000592860 PHF23Q9BUL5 403 aaPredicted RBP34.67■■■■□ 3.14
CFD-202ENST00000592860 XRN1Q8IZH2 1706 aaKnown RBP34.64■■■■□ 3.14
CFD-202ENST00000592860 FOXD1Q16676 465 aa34.63■■■■□ 3.13
CFD-202ENST00000592860 C19orf44Q9H6X5 657 aa34.62■■■■□ 3.13
CFD-202ENST00000592860 KIF1BO60333 1816 aa34.62■■■■□ 3.13
CFD-202ENST00000592860 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.6■■■■□ 3.13
CFD-202ENST00000592860 CADPS2Q86UW7 1296 aa34.58■■■■□ 3.13
CFD-202ENST00000592860 ATF3P18847 181 aa34.56■■■■□ 3.12
CFD-202ENST00000592860 PHLPP1O60346 1717 aa34.52■■■■□ 3.12
CFD-202ENST00000592860 VGFO15240 615 aaPredicted RBP34.51■■■■□ 3.12
CFD-202ENST00000592860 MPHOSPH9Q99550 1183 aa34.51■■■■□ 3.12
CFD-202ENST00000592860 RGS17Q9UGC6 210 aaPredicted RBP34.51■■■■□ 3.12
CFD-202ENST00000592860 RPGRIP1LQ68CZ1 1315 aa34.5■■■■□ 3.11
CFD-202ENST00000592860 DCCP43146 1447 aa34.49■■■■□ 3.11
CFD-202ENST00000592860 COL16A1Q07092 1604 aaPredicted RBP34.48■■■■□ 3.11
CFD-202ENST00000592860 CCDC144AA2RUR9 1427 aa34.46■■■■□ 3.11
CFD-202ENST00000592860 SETD1AO15047 1707 aaKnown RBP34.45■■■■□ 3.11
CFD-202ENST00000592860 JCADQ9P266 1359 aa34.45■■■■□ 3.11
CFD-202ENST00000592860 BRINP3Q76B58 766 aa34.44■■■■□ 3.1
CFD-202ENST00000592860 ADGRL3Q9HAR2 1447 aa34.43■■■■□ 3.1
CFD-202ENST00000592860 AHDC1Q5TGY3 1603 aaPredicted RBP34.43■■■■□ 3.1
CFD-202ENST00000592860 PPLO60437 1756 aa34.42■■■■□ 3.1
CFD-202ENST00000592860 MST1RQ04912 1400 aa34.42■■■■□ 3.1
CFD-202ENST00000592860 SETD5Q9C0A6 1442 aa34.41■■■■□ 3.1
CFD-202ENST00000592860 SPATA31E1Q6ZUB1 1445 aa34.4■■■■□ 3.1
CFD-202ENST00000592860 PTCH1Q13635 1447 aa34.39■■■■□ 3.1
CFD-202ENST00000592860 ROBO2Q9HCK4 1378 aa34.39■■■■□ 3.1
CFD-202ENST00000592860 ASXL1Q8IXJ9 1541 aa34.37■■■■□ 3.09
CFD-202ENST00000592860 RGL3Q3MIN7 710 aa34.37■■■■□ 3.09
CFD-202ENST00000592860 NALCNQ8IZF0 1738 aa34.37■■■■□ 3.09
CFD-202ENST00000592860 ADGRF5Q8IZF2 1346 aa34.36■■■■□ 3.09
CFD-202ENST00000592860 PRAG1Q86YV5 1406 aa34.34■■■■□ 3.09
CFD-202ENST00000592860 RAB3GAP2Q9H2M9 1393 aa34.32■■■■□ 3.08
CFD-202ENST00000592860 POTEAQ6S8J7 498 aa34.31■■■■□ 3.08
CFD-202ENST00000592860 LRP6O75581 1613 aa34.3■■■■□ 3.08
CFD-202ENST00000592860 ANKRD30BQ9BXX2 1392 aa34.27■■■■□ 3.08
CFD-202ENST00000592860 SPATA31A6Q5VVP1 1343 aa34.27■■■■□ 3.08
CFD-202ENST00000592860 ACIN1Q9UKV3 1341 aaKnown RBP34.26■■■■□ 3.07
CFD-202ENST00000592860 IFT172Q9UG01 1749 aa34.25■■■■□ 3.07
CFD-202ENST00000592860 C1orf167Q5SNV9 1468 aa34.25■■■■□ 3.07
CFD-202ENST00000592860 DDX17Q92841 729 aaKnown RBP34.24■■■■□ 3.07
CFD-202ENST00000592860 SHPRHQ149N8 1683 aa34.24■■■■□ 3.07
CFD-202ENST00000592860 NHSL1Q5SYE7 1610 aa34.23■■■■□ 3.07
CFD-202ENST00000592860 PIK3C2GO75747 1445 aa34.21■■■■□ 3.07
CFD-202ENST00000592860 STK26Q9P289 416 aa34.17■■■■□ 3.06
CFD-202ENST00000592860 TMEM132EQ6IEE7 984 aa34.16■■■■□ 3.06
CFD-202ENST00000592860 TECPR2O15040 1411 aa34.15■■■■□ 3.06
CFD-202ENST00000592860 LRPPRCP42704 1394 aaKnown RBP34.15■■■■□ 3.06
CFD-202ENST00000592860 MEX3CQ5U5Q3 659 aaKnown RBP34.15■■■■□ 3.06
CFD-202ENST00000592860 ORAI2Q96SN7 254 aa34.15■■■■□ 3.06
CFD-202ENST00000592860 NUTM2BA6NNL0 878 aaPredicted RBP34.12■■■■□ 3.05
CFD-202ENST00000592860 NUTM2EB1AL46 878 aaPredicted RBP34.12■■■■□ 3.05
CFD-202ENST00000592860 WAPLQ7Z5K2 1190 aa34.12■■■■□ 3.05
CFD-202ENST00000592860 NUTM2AQ8IVF1 878 aaPredicted RBP34.12■■■■□ 3.05
CFD-202ENST00000592860 LRRC59Q96AG4 307 aaKnown RBP34.11■■■■□ 3.05
CFD-202ENST00000592860 CDC42BPGQ6DT37 1551 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms