RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
VMP1-215ENST00000592619 SULF1Q8IWU6 871 aa11.95□□□□□ -0.5
VMP1-215ENST00000592619 C1orf115Q9H7X2 142 aa11.95□□□□□ -0.5
VMP1-215ENST00000592619 TRIM6-TRIM34B2RNG4 842 aa11.94□□□□□ -0.5
VMP1-215ENST00000592619 DNAJB2P25686 324 aa11.94□□□□□ -0.5
VMP1-215ENST00000592619 TUSC1Q2TAM9 212 aa11.94□□□□□ -0.5
VMP1-215ENST00000592619 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
VMP1-215ENST00000592619 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
VMP1-215ENST00000592619 ATP1B4Q9UN42 357 aaPredicted RBP11.94□□□□□ -0.5
VMP1-215ENST00000592619 BANK1Q8NDB2 785 aa11.93□□□□□ -0.5
VMP1-215ENST00000592619 SPIRE2Q8WWL2 714 aa11.93□□□□□ -0.5
VMP1-215ENST00000592619 TATDN2Q93075 761 aa11.93□□□□□ -0.5
VMP1-215ENST00000592619 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
VMP1-215ENST00000592619 TRAK2O60296 914 aa11.92□□□□□ -0.5
VMP1-215ENST00000592619 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
VMP1-215ENST00000592619 TMEM134Q9H6X4 195 aa11.92□□□□□ -0.5
VMP1-215ENST00000592619 C3orf80F5H4A9 247 aa11.91□□□□□ -0.5
VMP1-215ENST00000592619 PPP2R2DQ66LE6 453 aa11.91□□□□□ -0.5
VMP1-215ENST00000592619 PNMA3Q9UL41 463 aa11.91□□□□□ -0.5
VMP1-215ENST00000592619 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
VMP1-215ENST00000592619 APBB1O00213 710 aa11.9□□□□□ -0.5
VMP1-215ENST00000592619 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
VMP1-215ENST00000592619 SPTLC1O15269 473 aa11.89□□□□□ -0.51
VMP1-215ENST00000592619 GJA5P36382 358 aa11.89□□□□□ -0.51
VMP1-215ENST00000592619 RFC5P40937 340 aa11.89□□□□□ -0.51
VMP1-215ENST00000592619 TMEM259Q4ZIN3 620 aa11.89□□□□□ -0.51
VMP1-215ENST00000592619 LIMD1Q9UGP4 676 aa11.89□□□□□ -0.51
VMP1-215ENST00000592619 ARID3CA6NKF2 412 aa11.87□□□□□ -0.51
VMP1-215ENST00000592619 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
VMP1-215ENST00000592619 NUTM1Q86Y26 1132 aa11.87□□□□□ -0.51
VMP1-215ENST00000592619 ERBB3P21860 1342 aa11.86□□□□□ -0.51
VMP1-215ENST00000592619 RAD21O60216 631 aa11.85□□□□□ -0.51
VMP1-215ENST00000592619 RSBN1LQ6PCB5 846 aaPredicted RBP11.85□□□□□ -0.51
VMP1-215ENST00000592619 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
VMP1-215ENST00000592619 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
VMP1-215ENST00000592619 FBXO31Q5XUX0 539 aaPredicted RBP11.84□□□□□ -0.51
VMP1-215ENST00000592619 PROSER2Q86WR7 435 aaPredicted RBP11.84□□□□□ -0.51
VMP1-215ENST00000592619 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
VMP1-215ENST00000592619 PROX2Q3B8N5 592 aa11.83□□□□□ -0.52
VMP1-215ENST00000592619 MYT1LQ9UL68 1186 aa11.83□□□□□ -0.52
VMP1-215ENST00000592619 ZBED2Q9BTP6 218 aa11.82□□□□□ -0.52
VMP1-215ENST00000592619 MOXD2PA6NHM9 499 aa11.81□□□□□ -0.52
VMP1-215ENST00000592619 SMAPO00193 183 aa11.81□□□□□ -0.52
VMP1-215ENST00000592619 SOCS7O14512 581 aa11.81□□□□□ -0.52
VMP1-215ENST00000592619 POM121Q96HA1 1249 aa11.81□□□□□ -0.52
VMP1-215ENST00000592619 ARID3AQ99856 593 aa11.81□□□□□ -0.52
VMP1-215ENST00000592619 SNRKQ9NRH2 765 aa11.81□□□□□ -0.52
VMP1-215ENST00000592619 RSPH4AQ5TD94 716 aa11.8□□□□□ -0.52
VMP1-215ENST00000592619 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
VMP1-215ENST00000592619 LILRB3O75022 631 aa11.79□□□□□ -0.52
VMP1-215ENST00000592619 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
VMP1-215ENST00000592619 COG6Q9Y2V7 657 aa11.79□□□□□ -0.52
VMP1-215ENST00000592619 KDM4AO75164 1064 aa11.78□□□□□ -0.52
VMP1-215ENST00000592619 USP46P62068 366 aa11.78□□□□□ -0.52
VMP1-215ENST00000592619 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
VMP1-215ENST00000592619 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
VMP1-215ENST00000592619 RDH13Q8NBN7 331 aa11.78□□□□□ -0.52
VMP1-215ENST00000592619 GCGRP47871 477 aa11.77□□□□□ -0.53
VMP1-215ENST00000592619 RABGEF1Q9UJ41 708 aa11.77□□□□□ -0.53
VMP1-215ENST00000592619 NDUFV2P19404 249 aa11.76□□□□□ -0.53
VMP1-215ENST00000592619 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
VMP1-215ENST00000592619 ARHGAP33O14559 1287 aa11.75□□□□□ -0.53
VMP1-215ENST00000592619 QPCTQ16769 361 aa11.75□□□□□ -0.53
VMP1-215ENST00000592619 CCDC82Q8N4S0 544 aa11.75□□□□□ -0.53
VMP1-215ENST00000592619 MTMR14Q8NCE2 650 aa11.74□□□□□ -0.53
VMP1-215ENST00000592619 ZNF777Q9ULD5 760 aaPredicted RBP11.74□□□□□ -0.53
VMP1-215ENST00000592619 PSEN2P49810 448 aa11.73□□□□□ -0.53
VMP1-215ENST00000592619 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
VMP1-215ENST00000592619 HOXA2O43364 376 aa11.72□□□□□ -0.53
VMP1-215ENST00000592619 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
VMP1-215ENST00000592619 SLC10A3P09131 477 aa11.71□□□□□ -0.53
VMP1-215ENST00000592619 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
VMP1-215ENST00000592619 NUTM2BA6NNL0 878 aaPredicted RBP11.7□□□□□ -0.54
VMP1-215ENST00000592619 NUTM2EB1AL46 878 aaPredicted RBP11.7□□□□□ -0.54
VMP1-215ENST00000592619 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
VMP1-215ENST00000592619 NUTM2DQ5VT03 806 aaPredicted RBP11.7□□□□□ -0.54
VMP1-215ENST00000592619 NUTM2AQ8IVF1 878 aaPredicted RBP11.7□□□□□ -0.54
VMP1-215ENST00000592619 ZNF687Q8N1G0 1237 aa11.7□□□□□ -0.54
VMP1-215ENST00000592619 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
VMP1-215ENST00000592619 PRM3Q9NNZ6 103 aa11.7□□□□□ -0.54
VMP1-215ENST00000592619 AP1G2O75843 785 aa11.69□□□□□ -0.54
VMP1-215ENST00000592619 FDX1P10109 184 aa11.69□□□□□ -0.54
VMP1-215ENST00000592619 PBX2P40425 430 aa11.69□□□□□ -0.54
VMP1-215ENST00000592619 POTEEQ6S8J3 1075 aa11.69□□□□□ -0.54
VMP1-215ENST00000592619 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
VMP1-215ENST00000592619 HRCP23327 699 aa11.68□□□□□ -0.54
VMP1-215ENST00000592619 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
VMP1-215ENST00000592619 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
VMP1-215ENST00000592619 SLC4A3P48751 1232 aa11.67□□□□□ -0.54
VMP1-215ENST00000592619 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
VMP1-215ENST00000592619 GDPD2Q9HCC8 539 aa11.67□□□□□ -0.54
VMP1-215ENST00000592619 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
VMP1-215ENST00000592619 WWC1Q8IX03 1113 aa11.66□□□□□ -0.54
VMP1-215ENST00000592619 SEPT9Q9UHD8 586 aaPredicted RBP11.66□□□□□ -0.54
VMP1-215ENST00000592619 VPS9D1Q9Y2B5 631 aa11.66□□□□□ -0.54
VMP1-215ENST00000592619 USP17L8P0C7I0 530 aa11.65□□□□□ -0.54
VMP1-215ENST00000592619 DMRTA1Q5VZB9 504 aa11.65□□□□□ -0.54
VMP1-215ENST00000592619 SLF2Q8IX21 1173 aa11.65□□□□□ -0.54
VMP1-215ENST00000592619 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.54
VMP1-215ENST00000592619 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms