RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
SMARCA4-218ENST00000592158 RTEL1-TNFRSF6BF6WH68 1400 aa15.1■□□□□ 0.01
SMARCA4-218ENST00000592158 CFAP65Q6ZU64 1925 aaKnown RBP15.1■□□□□ 0.01
SMARCA4-218ENST00000592158 ERVK-7P63135 1459 aa15.1■□□□□ 0.01
SMARCA4-218ENST00000592158 C14orf37Q86TY3 774 aa15.1■□□□□ 0.01
SMARCA4-218ENST00000592158 FNBP4Q8N3X1 1017 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-218ENST00000592158 ATF3P18847 181 aa15.09■□□□□ 0.01
SMARCA4-218ENST00000592158 UNC13BO14795 1591 aa15.09■□□□□ 0.01
SMARCA4-218ENST00000592158 TET3O43151 1660 aa15.09■□□□□ 0.01
SMARCA4-218ENST00000592158 BAG6P46379 1132 aa15.08■□□□□ 0
SMARCA4-218ENST00000592158 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.08■□□□□ 0
SMARCA4-218ENST00000592158 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
SMARCA4-218ENST00000592158 CAMTA1Q9Y6Y1 1673 aa15.06■□□□□ 0
SMARCA4-218ENST00000592158 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.06■□□□□ 01e-9■■■□□ 18.3
SMARCA4-218ENST00000592158 PCDH10Q9P2E7 1040 aa15.06■□□□□ 0
SMARCA4-218ENST00000592158 TMEM2Q9UHN6 1383 aa15.06■□□□□ 0
SMARCA4-218ENST00000592158 BRWD3Q6RI45 1802 aa15.06■□□□□ 0
SMARCA4-218ENST00000592158 GJD4Q96KN9 370 aaPredicted RBP15.05■□□□□ -0
SMARCA4-218ENST00000592158 NCOA3Q9Y6Q9 1424 aa15.05■□□□□ -0
SMARCA4-218ENST00000592158 MROH1Q8NDA8 1641 aa15.05■□□□□ -0
SMARCA4-218ENST00000592158 UTRNP46939 3433 aa15.05■□□□□ -0
SMARCA4-218ENST00000592158 GPATCH8Q9UKJ3 1502 aaKnown RBP15.04■□□□□ -0
SMARCA4-218ENST00000592158 ASXL1Q8IXJ9 1541 aa15.03■□□□□ -0
SMARCA4-218ENST00000592158 CAPN15O75808 1086 aa15.03■□□□□ -0
SMARCA4-218ENST00000592158 C19orf44Q9H6X5 657 aa15.03■□□□□ -0
SMARCA4-218ENST00000592158 PPP1R1BQ9UD71 204 aaPredicted RBP15.03■□□□□ -0
SMARCA4-218ENST00000592158 PLEKHH2Q8IVE3 1493 aa15.02■□□□□ -0
SMARCA4-218ENST00000592158 CHD2O14647 1828 aaKnown RBP15.02■□□□□ -0
SMARCA4-218ENST00000592158 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
SMARCA4-218ENST00000592158 LRRIQ1Q96JM4 1722 aa15.01□□□□□ -0.01
SMARCA4-218ENST00000592158 GIGYF1O75420 1035 aaPredicted RBP15.01□□□□□ -0.01
SMARCA4-218ENST00000592158 SPHKAPQ2M3C7 1700 aa15□□□□□ -0.01
SMARCA4-218ENST00000592158 EN1Q05925 392 aaPredicted RBP15□□□□□ -0.01
SMARCA4-218ENST00000592158 CHD4Q14839 1912 aa15□□□□□ -0.01
SMARCA4-218ENST00000592158 DDX17Q92841 729 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-218ENST00000592158 BCANQ96GW7 911 aa14.99□□□□□ -0.01
SMARCA4-218ENST00000592158 CAMSAP2Q08AD1 1489 aa14.99□□□□□ -0.01
SMARCA4-218ENST00000592158 ARHGAP35Q9NRY4 1499 aa14.99□□□□□ -0.01
SMARCA4-218ENST00000592158 PTCH1Q13635 1447 aa14.99□□□□□ -0.01
SMARCA4-218ENST00000592158 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
SMARCA4-218ENST00000592158 STAG3Q9UJ98 1225 aa14.97□□□□□ -0.01
SMARCA4-218ENST00000592158 PIK3C2BO00750 1634 aa14.96□□□□□ -0.01
SMARCA4-218ENST00000592158 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
SMARCA4-218ENST00000592158 GLI3P10071 1580 aa14.94□□□□□ -0.02
SMARCA4-218ENST00000592158 CFDP1Q9UEE9 299 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-218ENST00000592158 SEPT12Q8IYM1 358 aa14.92□□□□□ -0.02
SMARCA4-218ENST00000592158 EFCAB6Q5THR3 1501 aa14.91□□□□□ -0.02
SMARCA4-218ENST00000592158 KRT27Q7Z3Y8 459 aa14.9□□□□□ -0.02
SMARCA4-218ENST00000592158 SPON1Q9HCB6 807 aa14.9□□□□□ -0.02
SMARCA4-218ENST00000592158 PPP1R15AO75807 674 aaPredicted RBP14.89□□□□□ -0.03
SMARCA4-218ENST00000592158 PRELPP51888 382 aa14.88□□□□□ -0.03
SMARCA4-218ENST00000592158 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
SMARCA4-218ENST00000592158 MST1RQ04912 1400 aa14.88□□□□□ -0.03
SMARCA4-218ENST00000592158 CEP152O94986 1710 aa14.87□□□□□ -0.03
SMARCA4-218ENST00000592158 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-218ENST00000592158 EZH2Q15910 746 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-218ENST00000592158 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
SMARCA4-218ENST00000592158 KCNQ2O43526 872 aa14.86□□□□□ -0.03
SMARCA4-218ENST00000592158 RGPD1P0DJD0 1748 aa14.86□□□□□ -0.03
SMARCA4-218ENST00000592158 DCCP43146 1447 aa14.85□□□□□ -0.03
SMARCA4-218ENST00000592158 MARF1Q9Y4F3 1742 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-218ENST00000592158 ZNF644Q9H582 1327 aaPredicted RBP14.85□□□□□ -0.03
SMARCA4-218ENST00000592158 UNC5CLQ8IV45 518 aa14.84□□□□□ -0.03
SMARCA4-218ENST00000592158 DISP2A7MBM2 1401 aa14.82□□□□□ -0.04
SMARCA4-218ENST00000592158 IDI1Q13907 227 aa14.81□□□□□ -0.04
SMARCA4-218ENST00000592158 CCDC18Q5T9S5 1454 aa14.81□□□□□ -0.04
SMARCA4-218ENST00000592158 COL22A1Q8NFW1 1626 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-218ENST00000592158 COL13A1Q5TAT6 717 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-218ENST00000592158 TBX22Q9Y458 520 aa14.8□□□□□ -0.04
SMARCA4-218ENST00000592158 HSPA6P17066 643 aa14.79□□□□□ -0.04
SMARCA4-218ENST00000592158 MYOM2P54296 1465 aa14.79□□□□□ -0.04
SMARCA4-218ENST00000592158 SOS2Q07890 1332 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-218ENST00000592158 CCNB3Q8WWL7 1395 aa14.79□□□□□ -0.04
SMARCA4-218ENST00000592158 PLEKHG1Q9ULL1 1385 aa14.79□□□□□ -0.04
SMARCA4-218ENST00000592158 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
SMARCA4-218ENST00000592158 CAMKK2Q96RR4 588 aa14.78□□□□□ -0.04
SMARCA4-218ENST00000592158 TNS1Q9HBL0 1735 aaKnown RBP14.78□□□□□ -0.04
SMARCA4-218ENST00000592158 ARHGAP31Q2M1Z3 1444 aa14.77□□□□□ -0.04
SMARCA4-218ENST00000592158 A0A0G2JS52 829 aa14.75□□□□□ -0.05
SMARCA4-218ENST00000592158 MYT1Q01538 1121 aa14.75□□□□□ -0.05
SMARCA4-218ENST00000592158 TNS4Q8IZW8 715 aa14.75□□□□□ -0.05
SMARCA4-218ENST00000592158 SLIT2O94813 1529 aa14.75□□□□□ -0.05
SMARCA4-218ENST00000592158 LAMC1P11047 1609 aa14.74□□□□□ -0.05
SMARCA4-218ENST00000592158 NBPF8Q3BBV2 869 aa14.74□□□□□ -0.05
SMARCA4-218ENST00000592158 NBPF14Q5TI25 921 aa14.74□□□□□ -0.05
SMARCA4-218ENST00000592158 CCDC141Q6ZP82 1450 aa14.73□□□□□ -0.05
SMARCA4-218ENST00000592158 NRKQ7Z2Y5 1582 aa14.73□□□□□ -0.05
SMARCA4-218ENST00000592158 ADGRB3O60242 1522 aa14.72□□□□□ -0.05
SMARCA4-218ENST00000592158 FAM182BQ5T319 152 aa14.72□□□□□ -0.05
SMARCA4-218ENST00000592158 AMOTL2Q9Y2J4 779 aa14.72□□□□□ -0.05
SMARCA4-218ENST00000592158 CCDC9Q9Y3X0 531 aaKnown RBP14.72□□□□□ -0.05
SMARCA4-218ENST00000592158 FAM83GA6ND36 823 aa14.71□□□□□ -0.05
SMARCA4-218ENST00000592158 VPS72Q15906 364 aa14.71□□□□□ -0.05
SMARCA4-218ENST00000592158 PIK3R4Q99570 1358 aa14.71□□□□□ -0.06
SMARCA4-218ENST00000592158 NUP188Q5SRE5 1749 aa14.7□□□□□ -0.06
SMARCA4-218ENST00000592158 TRPM2O94759 1503 aa14.7□□□□□ -0.06
SMARCA4-218ENST00000592158 PARD3Q8TEW0 1356 aa14.7□□□□□ -0.06
SMARCA4-218ENST00000592158 ADGRB2O60241 1585 aa14.69□□□□□ -0.06
SMARCA4-218ENST00000592158 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
SMARCA4-218ENST00000592158 RREB1Q92766 1687 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms