RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 NPHP4O75161 1426 aaPredicted RBP19.09■□□□□ 0.65
GFAP-221ENST00000592065 TMEM2Q9UHN6 1383 aa19.09■□□□□ 0.65
GFAP-221ENST00000592065 SETD5Q9C0A6 1442 aa19.09■□□□□ 0.65
GFAP-221ENST00000592065 ADGRB3O60242 1522 aa19.08■□□□□ 0.65
GFAP-221ENST00000592065 LTBP4Q8N2S1 1624 aa19.08■□□□□ 0.65
GFAP-221ENST00000592065 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
GFAP-221ENST00000592065 SCAF11Q99590 1463 aaKnown RBP19.07■□□□□ 0.64
GFAP-221ENST00000592065 IQGAP1P46940 1657 aa19.07■□□□□ 0.64
GFAP-221ENST00000592065 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
GFAP-221ENST00000592065 SPHKAPQ2M3C7 1700 aa19.06■□□□□ 0.64
GFAP-221ENST00000592065 ARHGAP23Q9P227 1491 aa19.06■□□□□ 0.64
GFAP-221ENST00000592065 TMEM131LA2VDJ0 1609 aa19.05■□□□□ 0.64
GFAP-221ENST00000592065 BCANQ96GW7 911 aa19.05■□□□□ 0.64
GFAP-221ENST00000592065 SLIT1O75093 1534 aa19.05■□□□□ 0.64
GFAP-221ENST00000592065 RBM33Q96EV2 1170 aaKnown RBP19.05■□□□□ 0.64
GFAP-221ENST00000592065 CLTCL1P53675 1640 aa19.03■□□□□ 0.64
GFAP-221ENST00000592065 EID1Q9Y6B2 187 aa19.03■□□□□ 0.64
GFAP-221ENST00000592065 MED14O60244 1454 aa19.02■□□□□ 0.63
GFAP-221ENST00000592065 STRCP1A6NGW2 1772 aa19.02■□□□□ 0.63
GFAP-221ENST00000592065 MPHOSPH9Q99550 1183 aa19.02■□□□□ 0.63
GFAP-221ENST00000592065 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
GFAP-221ENST00000592065 ZNF326Q5BKZ1 582 aaKnown RBP19.01■□□□□ 0.63
GFAP-221ENST00000592065 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
GFAP-221ENST00000592065 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
GFAP-221ENST00000592065 ZFYVE9O95405 1425 aa18.99■□□□□ 0.63
GFAP-221ENST00000592065 FBXO41Q8TF61 875 aa18.98■□□□□ 0.63
GFAP-221ENST00000592065 TRPM2O94759 1503 aa18.97■□□□□ 0.63
GFAP-221ENST00000592065 KDM5AP29375 1690 aaKnown RBP18.96■□□□□ 0.63
GFAP-221ENST00000592065 RGL3Q3MIN7 710 aa18.94■□□□□ 0.62
GFAP-221ENST00000592065 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
GFAP-221ENST00000592065 UBAP1LF5GYI3 381 aa18.9■□□□□ 0.62
GFAP-221ENST00000592065 KIF1BO60333 1816 aa18.89■□□□□ 0.61
GFAP-221ENST00000592065 PIP4K2BP78356 416 aa18.89■□□□□ 0.61
GFAP-221ENST00000592065 SIN3AQ96ST3 1273 aa18.89■□□□□ 0.61
GFAP-221ENST00000592065 BCL11AQ9H165 835 aa18.89■□□□□ 0.61
GFAP-221ENST00000592065 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
GFAP-221ENST00000592065 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
GFAP-221ENST00000592065 ADAMTS13Q76LX8 1427 aa18.87■□□□□ 0.61
GFAP-221ENST00000592065 LRRC7Q96NW7 1537 aa18.87■□□□□ 0.61
GFAP-221ENST00000592065 NEXMIFQ5QGS0 1516 aa18.87■□□□□ 0.61
GFAP-221ENST00000592065 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
GFAP-221ENST00000592065 KCNA6P17658 529 aa18.84■□□□□ 0.61
GFAP-221ENST00000592065 CPS1P31327 1500 aa18.83■□□□□ 0.61
GFAP-221ENST00000592065 XIRP1Q702N8 1843 aaKnown RBP18.83■□□□□ 0.61
GFAP-221ENST00000592065 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
GFAP-221ENST00000592065 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
GFAP-221ENST00000592065 METP08581 1390 aa18.81■□□□□ 0.6
GFAP-221ENST00000592065 HDGFP51858 240 aaKnown RBP18.8■□□□□ 0.6
GFAP-221ENST00000592065 PROSER2Q86WR7 435 aaPredicted RBP18.8■□□□□ 0.6
GFAP-221ENST00000592065 ADGRF5Q8IZF2 1346 aa18.8■□□□□ 0.6
GFAP-221ENST00000592065 PTPRUQ92729 1446 aa18.8■□□□□ 0.6
GFAP-221ENST00000592065 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
GFAP-221ENST00000592065 DDX10Q13206 875 aaKnown RBP18.8■□□□□ 0.6
GFAP-221ENST00000592065 SPATA31E1Q6ZUB1 1445 aa18.79■□□□□ 0.6
GFAP-221ENST00000592065 CHD2O14647 1828 aaKnown RBP18.77■□□□□ 0.6
GFAP-221ENST00000592065 AMOTL2Q9Y2J4 779 aa18.77■□□□□ 0.6
GFAP-221ENST00000592065 TBX22Q9Y458 520 aa18.77■□□□□ 0.6
GFAP-221ENST00000592065 PPLO60437 1756 aa18.77■□□□□ 0.59
GFAP-221ENST00000592065 ANKRD30BQ9BXX2 1392 aa18.76■□□□□ 0.59
GFAP-221ENST00000592065 SETBP1Q9Y6X0 1596 aa18.74■□□□□ 0.59
GFAP-221ENST00000592065 C14orf37Q86TY3 774 aa18.74■□□□□ 0.59
GFAP-221ENST00000592065 NWD1Q149M9 1564 aa18.74■□□□□ 0.59
GFAP-221ENST00000592065 KDM2AQ9Y2K7 1162 aa18.73■□□□□ 0.59
GFAP-221ENST00000592065 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
GFAP-221ENST00000592065 TMEM132EQ6IEE7 984 aa18.73■□□□□ 0.59
GFAP-221ENST00000592065 CCER2I3L3R5 266 aa18.72■□□□□ 0.59
GFAP-221ENST00000592065 VGFO15240 615 aaPredicted RBP18.72■□□□□ 0.59
GFAP-221ENST00000592065 TOM1O60784 492 aa18.72■□□□□ 0.59
GFAP-221ENST00000592065 TSHZ2Q9NRE2 1034 aa18.72■□□□□ 0.59
GFAP-221ENST00000592065 HSPA1LP34931 641 aa18.7■□□□□ 0.58
GFAP-221ENST00000592065 IFT172Q9UG01 1749 aa18.7■□□□□ 0.58
GFAP-221ENST00000592065 STK26Q9P289 416 aa18.7■□□□□ 0.58
GFAP-221ENST00000592065 SETD1AO15047 1707 aaKnown RBP18.69■□□□□ 0.58
GFAP-221ENST00000592065 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
GFAP-221ENST00000592065 DIP2AQ14689 1571 aa18.68■□□□□ 0.58
GFAP-221ENST00000592065 DCAF11Q8TEB1 546 aa18.67■□□□□ 0.58
GFAP-221ENST00000592065 TONSLQ96HA7 1378 aa18.67■□□□□ 0.58
GFAP-221ENST00000592065 RPGRIP1LQ68CZ1 1315 aa18.66■□□□□ 0.58
GFAP-221ENST00000592065 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
GFAP-221ENST00000592065 CFAP70Q5T0N1 1121 aa18.66■□□□□ 0.58
GFAP-221ENST00000592065 ROBO2Q9HCK4 1378 aa18.65■□□□□ 0.58
GFAP-221ENST00000592065 HIRIP3Q9BW71 556 aaPredicted RBP18.65■□□□□ 0.58
GFAP-221ENST00000592065 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.58
GFAP-221ENST00000592065 MSH6P52701 1360 aa18.64■□□□□ 0.57
GFAP-221ENST00000592065 ANP32CO43423 234 aa18.64■□□□□ 0.57
GFAP-221ENST00000592065 PIK3C2GO75747 1445 aa18.64■□□□□ 0.57
GFAP-221ENST00000592065 PRKCSHP14314 528 aaPredicted RBP18.63■□□□□ 0.57
GFAP-221ENST00000592065 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
GFAP-221ENST00000592065 PIK3R4Q99570 1358 aa18.62■□□□□ 0.57
GFAP-221ENST00000592065 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
GFAP-221ENST00000592065 SAFB2Q14151 953 aaKnown RBP eCLIP18.61■□□□□ 0.57
GFAP-221ENST00000592065 PLEKHH1Q9ULM0 1364 aa18.6■□□□□ 0.57
GFAP-221ENST00000592065 ROBO1Q9Y6N7 1651 aa18.6■□□□□ 0.57
GFAP-221ENST00000592065 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
GFAP-221ENST00000592065 FKBP8Q14318 412 aa18.59■□□□□ 0.57
GFAP-221ENST00000592065 NALCNQ8IZF0 1738 aa18.59■□□□□ 0.57
GFAP-221ENST00000592065 SLAIN2Q9P270 581 aa18.59■□□□□ 0.57
GFAP-221ENST00000592065 DDX17Q92841 729 aaKnown RBP18.58■□□□□ 0.56
GFAP-221ENST00000592065 C19orf44Q9H6X5 657 aa18.57■□□□□ 0.56
GFAP-221ENST00000592065 ATF3P18847 181 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms