RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 YEATS2Q9ULM3 1422 aa14.19□□□□□ -0.14
VPS25-206ENST00000591584 ADGRB3O60242 1522 aa14.19□□□□□ -0.14
VPS25-206ENST00000591584 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
VPS25-206ENST00000591584 MRS2Q9HD23 443 aa14.18□□□□□ -0.14
VPS25-206ENST00000591584 CAMSAP1Q5T5Y3 1602 aa14.17□□□□□ -0.14
VPS25-206ENST00000591584 SENP3Q9H4L4 574 aaPredicted RBP14.16□□□□□ -0.14
VPS25-206ENST00000591584 C14orf93Q9H972 538 aaKnown RBP14.16□□□□□ -0.14
VPS25-206ENST00000591584 ZFYVE9O95405 1425 aa14.15□□□□□ -0.14
VPS25-206ENST00000591584 CHGAP10645 457 aaKnown RBP14.15□□□□□ -0.14
VPS25-206ENST00000591584 ADGRF5Q8IZF2 1346 aa14.15□□□□□ -0.15
VPS25-206ENST00000591584 SETBP1Q9Y6X0 1596 aa14.13□□□□□ -0.15
VPS25-206ENST00000591584 SBNO2Q9Y2G9 1366 aa14.13□□□□□ -0.15
VPS25-206ENST00000591584 PER1O15534 1290 aaPredicted RBP14.13□□□□□ -0.15
VPS25-206ENST00000591584 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
VPS25-206ENST00000591584 IQGAP1P46940 1657 aa14.13□□□□□ -0.15
VPS25-206ENST00000591584 MYBBP1AQ9BQG0 1328 aaKnown RBP14.13□□□□□ -0.15
VPS25-206ENST00000591584 BRD4O60885 1362 aaPredicted RBP14.12□□□□□ -0.15
VPS25-206ENST00000591584 PUS7Q96PZ0 661 aaKnown RBP14.12□□□□□ -0.15
VPS25-206ENST00000591584 UGGT1Q9NYU2 1555 aa14.12□□□□□ -0.15
VPS25-206ENST00000591584 IFT172Q9UG01 1749 aa14.12□□□□□ -0.15
VPS25-206ENST00000591584 PIK3C2BO00750 1634 aa14.12□□□□□ -0.15
VPS25-206ENST00000591584 DISP3Q9P2K9 1392 aa14.11□□□□□ -0.15
VPS25-206ENST00000591584 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
VPS25-206ENST00000591584 HNRNPUQ00839 825 aaKnown RBP eCLIP14.11□□□□□ -0.15
VPS25-206ENST00000591584 IDI1Q13907 227 aa14.11□□□□□ -0.15
VPS25-206ENST00000591584 NLRP13Q86W25 1043 aa14.09□□□□□ -0.15
VPS25-206ENST00000591584 TMC1Q8TDI8 760 aa14.09□□□□□ -0.15
VPS25-206ENST00000591584 PANK3Q9H999 370 aa14.09□□□□□ -0.15
VPS25-206ENST00000591584 PARD3Q8TEW0 1356 aa14.08□□□□□ -0.16
VPS25-206ENST00000591584 NPC1L1Q9UHC9 1359 aa14.08□□□□□ -0.16
VPS25-206ENST00000591584 FAM9BQ8IZU0 186 aa14.07□□□□□ -0.16
VPS25-206ENST00000591584 ESF1Q9H501 851 aaKnown RBP14.07□□□□□ -0.16
VPS25-206ENST00000591584 SYNMO15061 1565 aa14.07□□□□□ -0.16
VPS25-206ENST00000591584 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
VPS25-206ENST00000591584 MROH2AA6NES4 1674 aa14.07□□□□□ -0.16
VPS25-206ENST00000591584 INSRP06213 1382 aa14.07□□□□□ -0.16
VPS25-206ENST00000591584 PPLO60437 1756 aa14.06□□□□□ -0.16
VPS25-206ENST00000591584 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
VPS25-206ENST00000591584 CCDC184Q52MB2 194 aa14.06□□□□□ -0.16
VPS25-206ENST00000591584 PNISRQ8TF01 805 aaKnown RBP14.06□□□□□ -0.16
VPS25-206ENST00000591584 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
VPS25-206ENST00000591584 CENPJQ9HC77 1338 aaPredicted RBP14.06□□□□□ -0.16
VPS25-206ENST00000591584 KIF13AQ9H1H9 1805 aa14.06□□□□□ -0.16
VPS25-206ENST00000591584 ARHGEF40Q8TER5 1519 aa14.05□□□□□ -0.16
VPS25-206ENST00000591584 ERVK-7P63135 1459 aa14.05□□□□□ -0.16
VPS25-206ENST00000591584 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
VPS25-206ENST00000591584 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
VPS25-206ENST00000591584 NEFLP07196 543 aa14.03□□□□□ -0.16
VPS25-206ENST00000591584 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
VPS25-206ENST00000591584 NEXMIFQ5QGS0 1516 aa14.03□□□□□ -0.16
VPS25-206ENST00000591584 MYO3AQ8NEV4 1616 aa14.03□□□□□ -0.16
VPS25-206ENST00000591584 PREX1Q8TCU6 1659 aa14.03□□□□□ -0.16
VPS25-206ENST00000591584 ADGRB1O14514 1584 aa14.01□□□□□ -0.17
VPS25-206ENST00000591584 SPATA31D1Q6ZQQ2 1576 aa14.01□□□□□ -0.17
VPS25-206ENST00000591584 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
VPS25-206ENST00000591584 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
VPS25-206ENST00000591584 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
VPS25-206ENST00000591584 TMEM131LA2VDJ0 1609 aa14□□□□□ -0.17
VPS25-206ENST00000591584 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
VPS25-206ENST00000591584 FBXO31Q5XUX0 539 aaPredicted RBP13.99□□□□□ -0.17
VPS25-206ENST00000591584 ZMYM3Q14202 1370 aa13.98□□□□□ -0.17
VPS25-206ENST00000591584 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
VPS25-206ENST00000591584 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
VPS25-206ENST00000591584 TRAK1Q9UPV9 953 aa13.98□□□□□ -0.17
VPS25-206ENST00000591584 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
VPS25-206ENST00000591584 EVC2Q86UK5 1308 aa13.97□□□□□ -0.17
VPS25-206ENST00000591584 AMER1Q5JTC6 1135 aaPredicted RBP13.97□□□□□ -0.17
VPS25-206ENST00000591584 CC2D1BQ5T0F9 858 aaKnown RBP13.97□□□□□ -0.17
VPS25-206ENST00000591584 ASXL1Q8IXJ9 1541 aa13.96□□□□□ -0.17
VPS25-206ENST00000591584 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.18
VPS25-206ENST00000591584 MLECQ14165 292 aa13.95□□□□□ -0.18
VPS25-206ENST00000591584 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
VPS25-206ENST00000591584 CLTCQ00610 1675 aaKnown RBP13.95□□□□□ -0.18
VPS25-206ENST00000591584 A2ML1A8K2U0 1454 aa13.94□□□□□ -0.18
VPS25-206ENST00000591584 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
VPS25-206ENST00000591584 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
VPS25-206ENST00000591584 PPP2R1AP30153 589 aa13.92□□□□□ -0.18
VPS25-206ENST00000591584 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
VPS25-206ENST00000591584 RIMS2Q9UQ26 1411 aa13.91□□□□□ -0.18
VPS25-206ENST00000591584 TNRQ92752 1358 aa13.91□□□□□ -0.18
VPS25-206ENST00000591584 SMG6Q86US8 1419 aaKnown RBP13.9□□□□□ -0.18
VPS25-206ENST00000591584 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.18
VPS25-206ENST00000591584 FKBP8Q14318 412 aa13.9□□□□□ -0.18
VPS25-206ENST00000591584 NUTM2DQ5VT03 806 aaPredicted RBP13.9□□□□□ -0.18
VPS25-206ENST00000591584 ATAD2Q6PL18 1390 aa13.89□□□□□ -0.19
VPS25-206ENST00000591584 KCNA4P22459 653 aa13.89□□□□□ -0.19
VPS25-206ENST00000591584 POGKQ9P215 609 aa13.89□□□□□ -0.19
VPS25-206ENST00000591584 NUDCQ9Y266 331 aa13.89□□□□□ -0.19
VPS25-206ENST00000591584 NSD2O96028 1365 aa13.88□□□□□ -0.19
VPS25-206ENST00000591584 ABCC11Q96J66 1382 aa13.88□□□□□ -0.19
VPS25-206ENST00000591584 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
VPS25-206ENST00000591584 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
VPS25-206ENST00000591584 DLC1Q96QB1 1528 aa13.88□□□□□ -0.19
VPS25-206ENST00000591584 MYOM1P52179 1685 aa13.88□□□□□ -0.19
VPS25-206ENST00000591584 QRICH2Q9H0J4 1663 aa13.88□□□□□ -0.19
VPS25-206ENST00000591584 NLRP1Q9C000 1473 aa13.87□□□□□ -0.19
VPS25-206ENST00000591584 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
VPS25-206ENST00000591584 ANKRD36BQ8N2N9 1353 aa13.86□□□□□ -0.19
VPS25-206ENST00000591584 WDR43Q15061 677 aaKnown RBP eCLIP13.86□□□□□ -0.19
VPS25-206ENST00000591584 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms