RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 DAPK1P53355 1430 aa35.34■■■■□ 3.25
LSM7-206ENST00000591515 NOS1P29475 1434 aa35.33■■■■□ 3.25
LSM7-206ENST00000591515 MSH6P52701 1360 aa35.32■■■■□ 3.24
LSM7-206ENST00000591515 COL16A1Q07092 1604 aaPredicted RBP35.32■■■■□ 3.24
LSM7-206ENST00000591515 JCADQ9P266 1359 aa35.29■■■■□ 3.24
LSM7-206ENST00000591515 FAM50AQ14320 339 aaKnown RBP35.26■■■■□ 3.24
LSM7-206ENST00000591515 SLAIN2Q9P270 581 aa35.26■■■■□ 3.24
LSM7-206ENST00000591515 GCC2Q8IWJ2 1684 aa35.24■■■■□ 3.23
LSM7-206ENST00000591515 LRP6O75581 1613 aa35.22■■■■□ 3.23
LSM7-206ENST00000591515 ZFYVE9O95405 1425 aa35.21■■■■□ 3.23
LSM7-206ENST00000591515 BCANQ96GW7 911 aa35.19■■■■□ 3.22
LSM7-206ENST00000591515 ANKRD30AQ9BXX3 1397 aa35.19■■■■□ 3.22
LSM7-206ENST00000591515 PLEKHG1Q9ULL1 1385 aa35.17■■■■□ 3.22
LSM7-206ENST00000591515 SLC52A1Q9NWF4 448 aa35.17■■■■□ 3.22
LSM7-206ENST00000591515 CHIC2Q9UKJ5 165 aa35.17■■■■□ 3.22
LSM7-206ENST00000591515 SHPRHQ149N8 1683 aa35.14■■■■□ 3.22
LSM7-206ENST00000591515 TMEM131LA2VDJ0 1609 aa35.14■■■■□ 3.22
LSM7-206ENST00000591515 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.12■■■■□ 3.21
LSM7-206ENST00000591515 RPRD2Q5VT52 1461 aaKnown RBP35.12■■■■□ 3.21
LSM7-206ENST00000591515 AHDC1Q5TGY3 1603 aaPredicted RBP35.12■■■■□ 3.21
LSM7-206ENST00000591515 RRBP1Q9P2E9 1410 aaKnown RBP35.12■■■■□ 3.21
LSM7-206ENST00000591515 RIMS2Q9UQ26 1411 aa35.11■■■■□ 3.21
LSM7-206ENST00000591515 SPATA31A6Q5VVP1 1343 aa35.08■■■■□ 3.21
LSM7-206ENST00000591515 ADGRL2O95490 1459 aa35.08■■■■□ 3.21
LSM7-206ENST00000591515 NCOA3Q9Y6Q9 1424 aa35.07■■■■□ 3.21
LSM7-206ENST00000591515 UPF1Q92900 1129 aaKnown RBP eCLIP35.07■■■■□ 3.2
LSM7-206ENST00000591515 PPP1R15AO75807 674 aaPredicted RBP35.04■■■■□ 3.2
LSM7-206ENST00000591515 MEX3CQ5U5Q3 659 aaKnown RBP35.02■■■■□ 3.2
LSM7-206ENST00000591515 ZNF772Q68DY9 489 aaPredicted RBP35.02■■■■□ 3.2
LSM7-206ENST00000591515 TRIM52Q96A61 297 aa35.02■■■■□ 3.2
LSM7-206ENST00000591515 TBX22Q9Y458 520 aa35.02■■■■□ 3.2
LSM7-206ENST00000591515 ADAMTS13Q76LX8 1427 aa35.01■■■■□ 3.2
LSM7-206ENST00000591515 DIP2AQ14689 1571 aa35■■■■□ 3.19
LSM7-206ENST00000591515 C14orf37Q86TY3 774 aa34.98■■■■□ 3.19
LSM7-206ENST00000591515 HDGFP51858 240 aaKnown RBP34.96■■■■□ 3.19
LSM7-206ENST00000591515 ANKRD50Q9ULJ7 1429 aa34.96■■■■□ 3.19
LSM7-206ENST00000591515 CADPS2Q86UW7 1296 aa34.95■■■■□ 3.19
LSM7-206ENST00000591515 E9PCH4 1651 aa34.94■■■■□ 3.18
LSM7-206ENST00000591515 UNC13BO14795 1591 aa34.92■■■■□ 3.18
LSM7-206ENST00000591515 ITGAEP38570 1179 aa34.92■■■■□ 3.18
LSM7-206ENST00000591515 C19orf44Q9H6X5 657 aa34.92■■■■□ 3.18
LSM7-206ENST00000591515 PIK3R4Q99570 1358 aa34.9■■■■□ 3.18
LSM7-206ENST00000591515 ATF3P18847 181 aa34.9■■■■□ 3.18
LSM7-206ENST00000591515 CDK12Q9NYV4 1490 aaPredicted RBP34.9■■■■□ 3.18
LSM7-206ENST00000591515 NUTM2DQ5VT03 806 aaPredicted RBP34.89■■■■□ 3.18
LSM7-206ENST00000591515 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.89■■■■□ 3.18
LSM7-206ENST00000591515 ROCK1Q13464 1354 aa34.88■■■■□ 3.17
LSM7-206ENST00000591515 TRPM2O94759 1503 aa34.88■■■■□ 3.17
LSM7-206ENST00000591515 CHGAP10645 457 aaKnown RBP34.87■■■■□ 3.17
LSM7-206ENST00000591515 RXRBP28702 533 aa34.87■■■■□ 3.17
LSM7-206ENST00000591515 NHSL1Q5SYE7 1610 aa34.86■■■■□ 3.17
LSM7-206ENST00000591515 BRINP3Q76B58 766 aa34.86■■■■□ 3.17
LSM7-206ENST00000591515 PTPRUQ92729 1446 aa34.85■■■■□ 3.17
LSM7-206ENST00000591515 ASXL1Q8IXJ9 1541 aa34.83■■■■□ 3.17
LSM7-206ENST00000591515 XRN1Q8IZH2 1706 aaKnown RBP34.82■■■■□ 3.16
LSM7-206ENST00000591515 NUTM2BA6NNL0 878 aaPredicted RBP34.82■■■■□ 3.16
LSM7-206ENST00000591515 NUTM2EB1AL46 878 aaPredicted RBP34.82■■■■□ 3.16
LSM7-206ENST00000591515 NUTM2AQ8IVF1 878 aaPredicted RBP34.82■■■■□ 3.16
LSM7-206ENST00000591515 NRXN3Q9Y4C0 1643 aa34.8■■■■□ 3.16
LSM7-206ENST00000591515 DCCP43146 1447 aa34.8■■■■□ 3.16
LSM7-206ENST00000591515 AFF2P51816 1311 aa34.79■■■■□ 3.16
LSM7-206ENST00000591515 IQGAP3Q86VI3 1631 aa34.78■■■■□ 3.16
LSM7-206ENST00000591515 AMOTL2Q9Y2J4 779 aa34.78■■■■□ 3.16
LSM7-206ENST00000591515 SETD5Q9C0A6 1442 aa34.78■■■■□ 3.16
LSM7-206ENST00000591515 MST1RQ04912 1400 aa34.74■■■■□ 3.15
LSM7-206ENST00000591515 RGS12O14924 1447 aa34.73■■■■□ 3.15
LSM7-206ENST00000591515 SETBP1Q9Y6X0 1596 aa34.7■■■■□ 3.14
LSM7-206ENST00000591515 NALCNQ8IZF0 1738 aa34.66■■■■□ 3.14
LSM7-206ENST00000591515 PNPLA6Q8IY17 1366 aa34.63■■■■□ 3.13
LSM7-206ENST00000591515 C8orf37Q96NL8 207 aa34.62■■■■□ 3.13
LSM7-206ENST00000591515 SPHKAPQ2M3C7 1700 aa34.61■■■■□ 3.13
LSM7-206ENST00000591515 LRRC59Q96AG4 307 aaKnown RBP34.61■■■■□ 3.13
LSM7-206ENST00000591515 RBM6P78332 1123 aaKnown RBP34.6■■■■□ 3.13
LSM7-206ENST00000591515 DDX17Q92841 729 aaKnown RBP34.6■■■■□ 3.13
LSM7-206ENST00000591515 QTRT2Q9H974 415 aaKnown RBP34.6■■■■□ 3.13
LSM7-206ENST00000591515 SRCAPQ6ZRS2 3230 aa34.59■■■■□ 3.13
LSM7-206ENST00000591515 ADGRL3Q9HAR2 1447 aa34.59■■■■□ 3.13
LSM7-206ENST00000591515 HFM1A2PYH4 1435 aa34.58■■■■□ 3.13
LSM7-206ENST00000591515 METP08581 1390 aa34.57■■■■□ 3.12
LSM7-206ENST00000591515 NAIPQ13075 1403 aa34.55■■■■□ 3.12
LSM7-206ENST00000591515 LAMC1P11047 1609 aa34.55■■■■□ 3.12
LSM7-206ENST00000591515 NUP155O75694 1391 aa34.53■■■■□ 3.12
LSM7-206ENST00000591515 ACIN1Q9UKV3 1341 aaKnown RBP34.48■■■■□ 3.11
LSM7-206ENST00000591515 C1orf167Q5SNV9 1468 aa34.46■■■■□ 3.11
LSM7-206ENST00000591515 NEXMIFQ5QGS0 1516 aa34.46■■■■□ 3.11
LSM7-206ENST00000591515 ADAMTS2O95450 1211 aa34.45■■■■□ 3.11
LSM7-206ENST00000591515 NGLY1Q96IV0 654 aa34.45■■■■□ 3.11
LSM7-206ENST00000591515 ATAD2Q6PL18 1390 aa34.44■■■■□ 3.1
LSM7-206ENST00000591515 ZNF326Q5BKZ1 582 aaKnown RBP34.43■■■■□ 3.1
LSM7-206ENST00000591515 CLTCL1P53675 1640 aa34.42■■■■□ 3.1
LSM7-206ENST00000591515 COL22A1Q8NFW1 1626 aaPredicted RBP34.38■■■■□ 3.09
LSM7-206ENST00000591515 KIF1BO60333 1816 aa34.38■■■■□ 3.09
LSM7-206ENST00000591515 SOS2Q07890 1332 aaPredicted RBP34.36■■■■□ 3.09
LSM7-206ENST00000591515 EP400Q96L91 3159 aa34.36■■■■□ 3.09
LSM7-206ENST00000591515 USP21Q9UK80 565 aa34.35■■■■□ 3.09
LSM7-206ENST00000591515 PTCH1Q13635 1447 aa34.35■■■■□ 3.09
LSM7-206ENST00000591515 ATRNO75882 1429 aa34.33■■■■□ 3.09
LSM7-206ENST00000591515 TRPC5Q9UL62 973 aaPredicted RBP34.33■■■■□ 3.09
LSM7-206ENST00000591515 MARF1Q9Y4F3 1742 aaKnown RBP34.33■■■■□ 3.09
LSM7-206ENST00000591515 ORAI2Q96SN7 254 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms