RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 MYBBP1AQ9BQG0 1328 aaKnown RBP14.53□□□□□ -0.08
VPS4B-206ENST00000591475 RALBP1Q15311 655 aa14.53□□□□□ -0.08
VPS4B-206ENST00000591475 CCDC144AA2RUR9 1427 aa14.52□□□□□ -0.08
VPS4B-206ENST00000591475 PLA2R1Q13018 1463 aa14.52□□□□□ -0.09
VPS4B-206ENST00000591475 ZC3H13Q5T200 1668 aaKnown RBP14.51□□□□□ -0.09
VPS4B-206ENST00000591475 ANP32AP39687 249 aaKnown RBP14.51□□□□□ -0.09
VPS4B-206ENST00000591475 PTPRTO14522 1441 aa14.51□□□□□ -0.09
VPS4B-206ENST00000591475 CEP152O94986 1710 aa14.5□□□□□ -0.09
VPS4B-206ENST00000591475 SIGLEC1Q9BZZ2 1709 aa14.5□□□□□ -0.09
VPS4B-206ENST00000591475 ARHGAP31Q2M1Z3 1444 aa14.5□□□□□ -0.09
VPS4B-206ENST00000591475 ST20-MTHFSA0A0A6YYL1 179 aa14.49□□□□□ -0.09
VPS4B-206ENST00000591475 NPATQ14207 1427 aa14.49□□□□□ -0.09
VPS4B-206ENST00000591475 TRPM1Q7Z4N2 1603 aa14.48□□□□□ -0.09
VPS4B-206ENST00000591475 MLECQ14165 292 aa14.48□□□□□ -0.09
VPS4B-206ENST00000591475 TRPM2O94759 1503 aa14.48□□□□□ -0.09
VPS4B-206ENST00000591475 DEKP35659 375 aaKnown RBP14.48□□□□□ -0.09
VPS4B-206ENST00000591475 IPO9Q96P70 1041 aaKnown RBP14.48□□□□□ -0.09
VPS4B-206ENST00000591475 ESF1Q9H501 851 aaKnown RBP14.48□□□□□ -0.09
VPS4B-206ENST00000591475 KDM2AQ9Y2K7 1162 aa14.48□□□□□ -0.09
VPS4B-206ENST00000591475 CAMSAP1Q5T5Y3 1602 aa14.47□□□□□ -0.09
VPS4B-206ENST00000591475 PAK3O75914 559 aaPredicted RBP14.47□□□□□ -0.09
VPS4B-206ENST00000591475 DCAF11Q8TEB1 546 aa14.46□□□□□ -0.09
VPS4B-206ENST00000591475 RRP1P56182 461 aaKnown RBP14.46□□□□□ -0.1
VPS4B-206ENST00000591475 SPHKAPQ2M3C7 1700 aa14.45□□□□□ -0.1
VPS4B-206ENST00000591475 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
VPS4B-206ENST00000591475 LAMC1P11047 1609 aa14.44□□□□□ -0.1
VPS4B-206ENST00000591475 PARD3Q8TEW0 1356 aa14.43□□□□□ -0.1
VPS4B-206ENST00000591475 PDE3BQ13370 1112 aa14.43□□□□□ -0.1
VPS4B-206ENST00000591475 NLRP13Q86W25 1043 aa14.43□□□□□ -0.1
VPS4B-206ENST00000591475 NOS1P29475 1434 aa14.43□□□□□ -0.1
VPS4B-206ENST00000591475 ZBTB47Q9UFB7 747 aaPredicted RBP14.42□□□□□ -0.1
VPS4B-206ENST00000591475 PRAG1Q86YV5 1406 aa14.42□□□□□ -0.1
VPS4B-206ENST00000591475 NBR1Q14596 966 aa14.42□□□□□ -0.1
VPS4B-206ENST00000591475 RCAN3Q9UKA8 241 aa14.42□□□□□ -0.1
VPS4B-206ENST00000591475 CLTCQ00610 1675 aaKnown RBP14.41□□□□□ -0.1
VPS4B-206ENST00000591475 TCERG1O14776 1098 aaKnown RBP14.4□□□□□ -0.1
VPS4B-206ENST00000591475 EXOC6Q8TAG9 804 aa14.4□□□□□ -0.1
VPS4B-206ENST00000591475 ZMYM3Q14202 1370 aa14.4□□□□□ -0.1
VPS4B-206ENST00000591475 CLTCL1P53675 1640 aa14.4□□□□□ -0.1
VPS4B-206ENST00000591475 RGL3Q3MIN7 710 aa14.39□□□□□ -0.11
VPS4B-206ENST00000591475 SLC52A1Q9NWF4 448 aa14.39□□□□□ -0.11
VPS4B-206ENST00000591475 INSRP06213 1382 aa14.38□□□□□ -0.11
VPS4B-206ENST00000591475 FBXO31Q5XUX0 539 aaPredicted RBP14.37□□□□□ -0.11
VPS4B-206ENST00000591475 GPRASP1Q5JY77 1395 aa14.37□□□□□ -0.11
VPS4B-206ENST00000591475 NEURL4Q96JN8 1562 aa14.37□□□□□ -0.11
VPS4B-206ENST00000591475 UGGT1Q9NYU2 1555 aa14.37□□□□□ -0.11
VPS4B-206ENST00000591475 RTL5Q5HYW3 569 aaPredicted RBP14.37□□□□□ -0.11
VPS4B-206ENST00000591475 STAC3Q96MF2 364 aa14.37□□□□□ -0.11
VPS4B-206ENST00000591475 PREX1Q8TCU6 1659 aa14.36□□□□□ -0.11
VPS4B-206ENST00000591475 ERVK-7P63135 1459 aa14.36□□□□□ -0.11
VPS4B-206ENST00000591475 SYNMO15061 1565 aa14.36□□□□□ -0.11
VPS4B-206ENST00000591475 CFAP65Q6ZU64 1925 aaKnown RBP14.35□□□□□ -0.11
VPS4B-206ENST00000591475 PER1O15534 1290 aaPredicted RBP14.35□□□□□ -0.11
VPS4B-206ENST00000591475 MS4A1P11836 297 aa14.35□□□□□ -0.11
VPS4B-206ENST00000591475 SALL2Q9Y467 1007 aaPredicted RBP14.35□□□□□ -0.11
VPS4B-206ENST00000591475 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
VPS4B-206ENST00000591475 MROH2AA6NES4 1674 aa14.34□□□□□ -0.11
VPS4B-206ENST00000591475 IDI1Q13907 227 aa14.34□□□□□ -0.11
VPS4B-206ENST00000591475 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
VPS4B-206ENST00000591475 PIK3C2BO00750 1634 aa14.34□□□□□ -0.11
VPS4B-206ENST00000591475 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
VPS4B-206ENST00000591475 KIF1BO60333 1816 aa14.33□□□□□ -0.12
VPS4B-206ENST00000591475 CHGAP10645 457 aaKnown RBP14.32□□□□□ -0.12
VPS4B-206ENST00000591475 PDE4AP27815 886 aa14.32□□□□□ -0.12
VPS4B-206ENST00000591475 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
VPS4B-206ENST00000591475 ADGRB3O60242 1522 aa14.31□□□□□ -0.12
VPS4B-206ENST00000591475 DISP3Q9P2K9 1392 aa14.31□□□□□ -0.12
VPS4B-206ENST00000591475 FER1L4A9Z1Z3 1794 aa14.31□□□□□ -0.12
VPS4B-206ENST00000591475 NPM2Q86SE8 214 aaKnown RBP14.31□□□□□ -0.12
VPS4B-206ENST00000591475 BACH2Q9BYV9 841 aa14.31□□□□□ -0.12
VPS4B-206ENST00000591475 CDCA7LQ96GN5 454 aa14.3□□□□□ -0.12
VPS4B-206ENST00000591475 RPGRIP1LQ68CZ1 1315 aa14.3□□□□□ -0.12
VPS4B-206ENST00000591475 CC2D1BQ5T0F9 858 aaKnown RBP14.29□□□□□ -0.12
VPS4B-206ENST00000591475 TESK2Q96S53 571 aa14.29□□□□□ -0.12
VPS4B-206ENST00000591475 TNRQ92752 1358 aa14.29□□□□□ -0.12
VPS4B-206ENST00000591475 CEBPAP49715 358 aaPredicted RBP14.28□□□□□ -0.12
VPS4B-206ENST00000591475 TMF1P82094 1093 aa14.28□□□□□ -0.12
VPS4B-206ENST00000591475 PANK3Q9H999 370 aa14.28□□□□□ -0.12
VPS4B-206ENST00000591475 STAG3Q9UJ98 1225 aa14.28□□□□□ -0.12
VPS4B-206ENST00000591475 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
VPS4B-206ENST00000591475 MADDQ8WXG6 1647 aa14.26□□□□□ -0.13
VPS4B-206ENST00000591475 MYOM2P54296 1465 aa14.26□□□□□ -0.13
VPS4B-206ENST00000591475 C3P01024 1663 aa14.26□□□□□ -0.13
VPS4B-206ENST00000591475 TMEM131LA2VDJ0 1609 aa14.25□□□□□ -0.13
VPS4B-206ENST00000591475 CRBNQ96SW2 442 aa14.25□□□□□ -0.13
VPS4B-206ENST00000591475 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
VPS4B-206ENST00000591475 PLIN1O60240 522 aa14.24□□□□□ -0.13
VPS4B-206ENST00000591475 IQGAP1P46940 1657 aa14.24□□□□□ -0.13
VPS4B-206ENST00000591475 NLRP1Q9C000 1473 aa14.24□□□□□ -0.13
VPS4B-206ENST00000591475 USP35Q9P2H5 1018 aa14.23□□□□□ -0.13
VPS4B-206ENST00000591475 IFT172Q9UG01 1749 aa14.22□□□□□ -0.13
VPS4B-206ENST00000591475 A2ML1A8K2U0 1454 aa14.22□□□□□ -0.13
VPS4B-206ENST00000591475 RIMS1Q86UR5 1692 aaKnown RBP14.22□□□□□ -0.13
VPS4B-206ENST00000591475 ADGRF5Q8IZF2 1346 aa14.22□□□□□ -0.13
VPS4B-206ENST00000591475 PLPPR3Q6T4P5 718 aa14.22□□□□□ -0.13
VPS4B-206ENST00000591475 DDRGK1Q96HY6 314 aa14.22□□□□□ -0.13
VPS4B-206ENST00000591475 NRXN1Q9ULB1 1477 aa14.22□□□□□ -0.13
VPS4B-206ENST00000591475 PPM1GO15355 546 aaPredicted RBP14.21□□□□□ -0.13
VPS4B-206ENST00000591475 NEXMIFQ5QGS0 1516 aa14.21□□□□□ -0.13
VPS4B-206ENST00000591475 ZFYVE9O95405 1425 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms