RNA–Protein interactions for RNA: ENST00000591458.1

LINC00662-209, long intergenic non-protein coding RNA 662, humanhuman

TSL 4

Gene LINC00662, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-209ENST00000591458 NUP155O75694 1391 aa18.49■□□□□ 0.55
LINC00662-209ENST00000591458 TMEM131LA2VDJ0 1609 aa18.49■□□□□ 0.55
LINC00662-209ENST00000591458 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
LINC00662-209ENST00000591458 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
LINC00662-209ENST00000591458 PLEKHG1Q9ULL1 1385 aa18.48■□□□□ 0.55
LINC00662-209ENST00000591458 KCNA6P17658 529 aa18.47■□□□□ 0.55
LINC00662-209ENST00000591458 BCANQ96GW7 911 aa18.47■□□□□ 0.55
LINC00662-209ENST00000591458 TMEM94Q12767 1356 aa18.46■□□□□ 0.55
LINC00662-209ENST00000591458 ILDR2Q71H61 639 aa18.46■□□□□ 0.55
LINC00662-209ENST00000591458 XIRP1Q702N8 1843 aaKnown RBP18.45■□□□□ 0.54
LINC00662-209ENST00000591458 MYO5BQ9ULV0 1848 aa18.45■□□□□ 0.54
LINC00662-209ENST00000591458 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.45■□□□□ 0.54
LINC00662-209ENST00000591458 SLC26A8Q96RN1 970 aa18.45■□□□□ 0.54
LINC00662-209ENST00000591458 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
LINC00662-209ENST00000591458 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
LINC00662-209ENST00000591458 SOCS7O14512 581 aa18.43■□□□□ 0.54
LINC00662-209ENST00000591458 CHGAP10645 457 aaKnown RBP18.43■□□□□ 0.54
LINC00662-209ENST00000591458 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
LINC00662-209ENST00000591458 NAIPQ13075 1403 aa18.42■□□□□ 0.54
LINC00662-209ENST00000591458 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
LINC00662-209ENST00000591458 MSH6P52701 1360 aa18.4■□□□□ 0.54
LINC00662-209ENST00000591458 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
LINC00662-209ENST00000591458 FAM135BQ49AJ0 1406 aa18.39■□□□□ 0.53
LINC00662-209ENST00000591458 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
LINC00662-209ENST00000591458 PIK3R4Q99570 1358 aa18.37■□□□□ 0.53
LINC00662-209ENST00000591458 CHD2O14647 1828 aaKnown RBP18.36■□□□□ 0.53
LINC00662-209ENST00000591458 TRPM2O94759 1503 aa18.36■□□□□ 0.53
LINC00662-209ENST00000591458 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
LINC00662-209ENST00000591458 TBX22Q9Y458 520 aa18.36■□□□□ 0.53
LINC00662-209ENST00000591458 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
LINC00662-209ENST00000591458 NCOA3Q9Y6Q9 1424 aa18.34■□□□□ 0.53
LINC00662-209ENST00000591458 ROBO1Q9Y6N7 1651 aa18.34■□□□□ 0.53
LINC00662-209ENST00000591458 TRIM52Q96A61 297 aa18.32■□□□□ 0.52
LINC00662-209ENST00000591458 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
LINC00662-209ENST00000591458 NUTM2DQ5VT03 806 aaPredicted RBP18.3■□□□□ 0.52
LINC00662-209ENST00000591458 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
LINC00662-209ENST00000591458 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
LINC00662-209ENST00000591458 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
LINC00662-209ENST00000591458 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
LINC00662-209ENST00000591458 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
LINC00662-209ENST00000591458 NRXN3Q9Y4C0 1643 aa18.26■□□□□ 0.51
LINC00662-209ENST00000591458 SLAIN2Q9P270 581 aa18.25■□□□□ 0.51
LINC00662-209ENST00000591458 NEXMIFQ5QGS0 1516 aa18.24■□□□□ 0.51
LINC00662-209ENST00000591458 XRN1Q8IZH2 1706 aaKnown RBP18.24■□□□□ 0.51
LINC00662-209ENST00000591458 KIF1BO60333 1816 aa18.24■□□□□ 0.51
LINC00662-209ENST00000591458 CADPS2Q86UW7 1296 aa18.24■□□□□ 0.51
LINC00662-209ENST00000591458 SLC4A1APQ9BWU0 796 aaKnown RBP18.24■□□□□ 0.51
LINC00662-209ENST00000591458 DCCP43146 1447 aa18.23■□□□□ 0.51
LINC00662-209ENST00000591458 PHLPP1O60346 1717 aa18.23■□□□□ 0.51
LINC00662-209ENST00000591458 ATF3P18847 181 aa18.22■□□□□ 0.51
LINC00662-209ENST00000591458 AMOTL2Q9Y2J4 779 aa18.22■□□□□ 0.51
LINC00662-209ENST00000591458 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
LINC00662-209ENST00000591458 C19orf44Q9H6X5 657 aa18.21■□□□□ 0.51
LINC00662-209ENST00000591458 PTPRUQ92729 1446 aa18.21■□□□□ 0.51
LINC00662-209ENST00000591458 JCADQ9P266 1359 aa18.19■□□□□ 0.5
LINC00662-209ENST00000591458 RAB3GAP2Q9H2M9 1393 aa18.18■□□□□ 0.5
LINC00662-209ENST00000591458 COL16A1Q07092 1604 aaPredicted RBP18.18■□□□□ 0.5
LINC00662-209ENST00000591458 AHDC1Q5TGY3 1603 aaPredicted RBP18.18■□□□□ 0.5
LINC00662-209ENST00000591458 METP08581 1390 aa18.16■□□□□ 0.5
LINC00662-209ENST00000591458 HRCP23327 699 aa18.15■□□□□ 0.5
LINC00662-209ENST00000591458 RPGRIP1LQ68CZ1 1315 aa18.15■□□□□ 0.5
LINC00662-209ENST00000591458 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
LINC00662-209ENST00000591458 ADGRL3Q9HAR2 1447 aa18.15■□□□□ 0.5
LINC00662-209ENST00000591458 VGFO15240 615 aaPredicted RBP18.14■□□□□ 0.49
LINC00662-209ENST00000591458 MPHOSPH9Q99550 1183 aa18.13■□□□□ 0.49
LINC00662-209ENST00000591458 CCDC144AA2RUR9 1427 aa18.13■□□□□ 0.49
LINC00662-209ENST00000591458 ASXL1Q8IXJ9 1541 aa18.12■□□□□ 0.49
LINC00662-209ENST00000591458 SPATA31A6Q5VVP1 1343 aa18.11■□□□□ 0.49
LINC00662-209ENST00000591458 MST1RQ04912 1400 aa18.11■□□□□ 0.49
LINC00662-209ENST00000591458 PRAG1Q86YV5 1406 aa18.11■□□□□ 0.49
LINC00662-209ENST00000591458 PPLO60437 1756 aa18.11■□□□□ 0.49
LINC00662-209ENST00000591458 SHPRHQ149N8 1683 aa18.1■□□□□ 0.49
LINC00662-209ENST00000591458 SETD1AO15047 1707 aaKnown RBP18.09■□□□□ 0.49
LINC00662-209ENST00000591458 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
LINC00662-209ENST00000591458 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
LINC00662-209ENST00000591458 RGS17Q9UGC6 210 aaPredicted RBP18.08■□□□□ 0.48
LINC00662-209ENST00000591458 NHSL1Q5SYE7 1610 aa18.05■□□□□ 0.48
LINC00662-209ENST00000591458 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
LINC00662-209ENST00000591458 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
LINC00662-209ENST00000591458 LRP6O75581 1613 aa18.04■□□□□ 0.48
LINC00662-209ENST00000591458 SPATA31E1Q6ZUB1 1445 aa18.03■□□□□ 0.48
LINC00662-209ENST00000591458 ROBO2Q9HCK4 1378 aa18.03■□□□□ 0.48
LINC00662-209ENST00000591458 FOXD1Q16676 465 aa18.02■□□□□ 0.48
LINC00662-209ENST00000591458 TRIM26Q12899 539 aaPredicted RBP18.01■□□□□ 0.47
LINC00662-209ENST00000591458 POTEAQ6S8J7 498 aa18.01■□□□□ 0.47
LINC00662-209ENST00000591458 C1orf167Q5SNV9 1468 aa18.01■□□□□ 0.47
LINC00662-209ENST00000591458 IFT172Q9UG01 1749 aa18.01■□□□□ 0.47
LINC00662-209ENST00000591458 CDC42BPGQ6DT37 1551 aa18■□□□□ 0.47
LINC00662-209ENST00000591458 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
LINC00662-209ENST00000591458 LRRC59Q96AG4 307 aaKnown RBP17.98■□□□□ 0.47
LINC00662-209ENST00000591458 TECPR2O15040 1411 aa17.98■□□□□ 0.47
LINC00662-209ENST00000591458 LAMC1P11047 1609 aa17.97■□□□□ 0.47
LINC00662-209ENST00000591458 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
LINC00662-209ENST00000591458 KNDC1Q76NI1 1749 aa17.96■□□□□ 0.47
LINC00662-209ENST00000591458 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
LINC00662-209ENST00000591458 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.46
LINC00662-209ENST00000591458 LRPPRCP42704 1394 aaKnown RBP17.95■□□□□ 0.46
LINC00662-209ENST00000591458 PNPLA6Q8IY17 1366 aa17.94■□□□□ 0.46
LINC00662-209ENST00000591458 MYOM2P54296 1465 aa17.94■□□□□ 0.46
LINC00662-209ENST00000591458 NUTM2BA6NNL0 878 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms