RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	STAG3	Q9UJ98	1225 aa		20.6	■□□□□ 0.89
NPC1-212	ENST00000591107	NOS1	P29475	1434 aa		20.6	■□□□□ 0.89
NPC1-212	ENST00000591107	MYO5B	Q9ULV0	1848 aa		20.6	■□□□□ 0.89
NPC1-212	ENST00000591107	IDI1	Q13907	227 aa		20.59	■□□□□ 0.89
NPC1-212	ENST00000591107	KDM5A	P29375	1690 aa	Known RBP	20.58	■□□□□ 0.89
NPC1-212	ENST00000591107	GCC2	Q8IWJ2	1684 aa		20.58	■□□□□ 0.88
NPC1-212	ENST00000591107	RBM33	Q96EV2	1170 aa	Known RBP	20.57	■□□□□ 0.88
NPC1-212	ENST00000591107	EID1	Q9Y6B2	187 aa		20.57	■□□□□ 0.88
NPC1-212	ENST00000591107	ANKRD50	Q9ULJ7	1429 aa		20.56	■□□□□ 0.88
NPC1-212	ENST00000591107	TET3	O43151	1660 aa		20.55	■□□□□ 0.88
NPC1-212	ENST00000591107	SLC26A8	Q96RN1	970 aa		20.55	■□□□□ 0.88
NPC1-212	ENST00000591107	UNC13B	O14795	1591 aa		20.54	■□□□□ 0.88
NPC1-212	ENST00000591107	TMEM94	Q12767	1356 aa		20.52	■□□□□ 0.88
NPC1-212	ENST00000591107	NWD1	Q149M9	1564 aa		20.51	■□□□□ 0.87
NPC1-212	ENST00000591107		E9PCH4	1651 aa		20.5	■□□□□ 0.87
NPC1-212	ENST00000591107	ROBO1	Q9Y6N7	1651 aa		20.48	■□□□□ 0.87
NPC1-212	ENST00000591107	ZFYVE9	O95405	1425 aa		20.48	■□□□□ 0.87
NPC1-212	ENST00000591107	PPARGC1B	Q86YN6	1023 aa	Known RBP	20.48	■□□□□ 0.87
NPC1-212	ENST00000591107	TMEM131L	A2VDJ0	1609 aa		20.48	■□□□□ 0.87
NPC1-212	ENST00000591107	RPRD2	Q5VT52	1461 aa	Known RBP	20.48	■□□□□ 0.87
NPC1-212	ENST00000591107	BCAN	Q96GW7	911 aa		20.46	■□□□□ 0.87
NPC1-212	ENST00000591107	RIMS2	Q9UQ26	1411 aa		20.45	■□□□□ 0.86
NPC1-212	ENST00000591107	NKTR	P30414	1462 aa	Known RBP	20.44	■□□□□ 0.86
NPC1-212	ENST00000591107	KCNA6	P17658	529 aa		20.44	■□□□□ 0.86
NPC1-212	ENST00000591107	ITGAE	P38570	1179 aa		20.44	■□□□□ 0.86
NPC1-212	ENST00000591107	NUTM2D	Q5VT03	806 aa	Predicted RBP	20.44	■□□□□ 0.86
NPC1-212	ENST00000591107	IQGAP3	Q86VI3	1631 aa		20.44	■□□□□ 0.86
NPC1-212	ENST00000591107	PROSER2	Q86WR7	435 aa	Predicted RBP	20.43	■□□□□ 0.86
NPC1-212	ENST00000591107	SLC4A2	P04920	1241 aa		20.42	■□□□□ 0.86
NPC1-212	ENST00000591107	CHGA	P10645	457 aa	Known RBP	20.42	■□□□□ 0.86
NPC1-212	ENST00000591107	SLC52A1	Q9NWF4	448 aa		20.41	■□□□□ 0.86
NPC1-212	ENST00000591107	PPP1R15A	O75807	674 aa	Predicted RBP	20.4	■□□□□ 0.86
NPC1-212	ENST00000591107	PLEKHG1	Q9ULL1	1385 aa		20.4	■□□□□ 0.86
NPC1-212	ENST00000591107	CHD2	O14647	1828 aa	Known RBP	20.39	■□□□□ 0.86
NPC1-212	ENST00000591107	FAM135B	Q49AJ0	1406 aa		20.38	■□□□□ 0.85
NPC1-212	ENST00000591107	RGS17	Q9UGC6	210 aa	Predicted RBP	20.37	■□□□□ 0.85
NPC1-212	ENST00000591107	ROCK1	Q13464	1354 aa		20.36	■□□□□ 0.85
NPC1-212	ENST00000591107	ADAMTS13	Q76LX8	1427 aa		20.36	■□□□□ 0.85
NPC1-212	ENST00000591107	PHLPP1	O60346	1717 aa		20.35	■□□□□ 0.85
NPC1-212	ENST00000591107	MSH6	P52701	1360 aa		20.34	■□□□□ 0.85
NPC1-212	ENST00000591107	NUP155	O75694	1391 aa		20.34	■□□□□ 0.85
NPC1-212	ENST00000591107	SPHKAP	Q2M3C7	1700 aa		20.31	■□□□□ 0.84
NPC1-212	ENST00000591107	NRXN3	Q9Y4C0	1643 aa		20.3	■□□□□ 0.84
NPC1-212	ENST00000591107	DIP2A	Q14689	1571 aa		20.29	■□□□□ 0.84
NPC1-212	ENST00000591107	COL16A1	Q07092	1604 aa	Predicted RBP	20.29	■□□□□ 0.84
NPC1-212	ENST00000591107	PTPRU	Q92729	1446 aa		20.28	■□□□□ 0.84
NPC1-212	ENST00000591107	SETD1A	O15047	1707 aa	Known RBP	20.28	■□□□□ 0.84
NPC1-212	ENST00000591107	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	20.28	■□□□□ 0.84
NPC1-212	ENST00000591107	TRPM2	O94759	1503 aa		20.27	■□□□□ 0.83
NPC1-212	ENST00000591107	POTEA	Q6S8J7	498 aa		20.26	■□□□□ 0.83
NPC1-212	ENST00000591107	C14orf37	Q86TY3	774 aa		20.26	■□□□□ 0.83
NPC1-212	ENST00000591107	CLTCL1	P53675	1640 aa		20.26	■□□□□ 0.83
NPC1-212	ENST00000591107	DCAF8L1	A6NGE4	600 aa		20.25	■□□□□ 0.83
NPC1-212	ENST00000591107	SLAIN2	Q9P270	581 aa		20.25	■□□□□ 0.83
NPC1-212	ENST00000591107	TBX22	Q9Y458	520 aa		20.24	■□□□□ 0.83
NPC1-212	ENST00000591107	XRN1	Q8IZH2	1706 aa	Known RBP	20.24	■□□□□ 0.83
NPC1-212	ENST00000591107	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	20.23	■□□□□ 0.83
NPC1-212	ENST00000591107	LRP6	O75581	1613 aa		20.23	■□□□□ 0.83
NPC1-212	ENST00000591107	HDGF	P51858	240 aa	Known RBP	20.21	■□□□□ 0.83
NPC1-212	ENST00000591107	SETBP1	Q9Y6X0	1596 aa		20.21	■□□□□ 0.83
NPC1-212	ENST00000591107	JCAD	Q9P266	1359 aa		20.19	■□□□□ 0.82
NPC1-212	ENST00000591107	NEXMIF	Q5QGS0	1516 aa		20.18	■□□□□ 0.82
NPC1-212	ENST00000591107	AHDC1	Q5TGY3	1603 aa	Predicted RBP	20.18	■□□□□ 0.82
NPC1-212	ENST00000591107	AMOTL2	Q9Y2J4	779 aa		20.18	■□□□□ 0.82
NPC1-212	ENST00000591107	ZNF326	Q5BKZ1	582 aa	Known RBP	20.17	■□□□□ 0.82
NPC1-212	ENST00000591107	PIK3R4	Q99570	1358 aa		20.17	■□□□□ 0.82
NPC1-212	ENST00000591107	MET	P08581	1390 aa		20.16	■□□□□ 0.82
NPC1-212	ENST00000591107	RRBP1	Q9P2E9	1410 aa	Known RBP	20.16	■□□□□ 0.82
NPC1-212	ENST00000591107	NAIP	Q13075	1403 aa		20.15	■□□□□ 0.82
NPC1-212	ENST00000591107	NCOA3	Q9Y6Q9	1424 aa		20.15	■□□□□ 0.82
NPC1-212	ENST00000591107	NALCN	Q8IZF0	1738 aa		20.15	■□□□□ 0.82
NPC1-212	ENST00000591107	SHPRH	Q149N8	1683 aa		20.14	■□□□□ 0.81
NPC1-212	ENST00000591107	ASXL1	Q8IXJ9	1541 aa		20.13	■□□□□ 0.81
NPC1-212	ENST00000591107	ATF3	P18847	181 aa		20.13	■□□□□ 0.81
NPC1-212	ENST00000591107	CACNB1	Q02641	598 aa	Predicted RBP	20.13	■□□□□ 0.81
NPC1-212	ENST00000591107	KIF1B	O60333	1816 aa		20.12	■□□□□ 0.81
NPC1-212	ENST00000591107	MYCN	P04198	464 aa	Predicted RBP	20.12	■□□□□ 0.81
NPC1-212	ENST00000591107	BRINP3	Q76B58	766 aa		20.11	■□□□□ 0.81
NPC1-212	ENST00000591107	CADPS2	Q86UW7	1296 aa		20.11	■□□□□ 0.81
NPC1-212	ENST00000591107	C19orf44	Q9H6X5	657 aa		20.11	■□□□□ 0.81
NPC1-212	ENST00000591107	MST1R	Q04912	1400 aa		20.1	■□□□□ 0.81
NPC1-212	ENST00000591107	NHSL1	Q5SYE7	1610 aa		20.09	■□□□□ 0.81
NPC1-212	ENST00000591107	MEX3C	Q5U5Q3	659 aa	Known RBP	20.07	■□□□□ 0.8
NPC1-212	ENST00000591107	DDX17	Q92841	729 aa	Known RBP	20.07	■□□□□ 0.8
NPC1-212	ENST00000591107	DCC	P43146	1447 aa		20.07	■□□□□ 0.8
NPC1-212	ENST00000591107	ADGRL3	Q9HAR2	1447 aa		20.07	■□□□□ 0.8
NPC1-212	ENST00000591107	NUTM2B	A6NNL0	878 aa	Predicted RBP	20.05	■□□□□ 0.8
NPC1-212	ENST00000591107	NUTM2E	B1AL46	878 aa	Predicted RBP	20.05	■□□□□ 0.8
NPC1-212	ENST00000591107	NUTM2A	Q8IVF1	878 aa	Predicted RBP	20.05	■□□□□ 0.8
NPC1-212	ENST00000591107	TRIM52	Q96A61	297 aa		20.04	■□□□□ 0.8
NPC1-212	ENST00000591107	SPATA31A6	Q5VVP1	1343 aa		20.03	■□□□□ 0.8
NPC1-212	ENST00000591107	HFM1	A2PYH4	1435 aa		20.03	■□□□□ 0.8
NPC1-212	ENST00000591107	PPL	O60437	1756 aa		20.02	■□□□□ 0.8
NPC1-212	ENST00000591107	ROBO2	Q9HCK4	1378 aa		20	■□□□□ 0.79
NPC1-212	ENST00000591107	SETD5	Q9C0A6	1442 aa		19.98	■□□□□ 0.79
NPC1-212	ENST00000591107	PTCH1	Q13635	1447 aa		19.97	■□□□□ 0.79
NPC1-212	ENST00000591107	PNPLA6	Q8IY17	1366 aa		19.96	■□□□□ 0.79
NPC1-212	ENST00000591107	C1orf167	Q5SNV9	1468 aa		19.96	■□□□□ 0.79
NPC1-212	ENST00000591107	ATXN8OS	P0DMR3	200 aa		19.94	■□□□□ 0.78
NPC1-212	ENST00000591107	AFF2	P51816	1311 aa		19.94	■□□□□ 0.78

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms