RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 RAPGEF3O95398 923 aa27.78■■■□□ 2.04
GCDH-214ENST00000591043 CDCA8Q53HL2 280 aa27.78■■■□□ 2.04
GCDH-214ENST00000591043 UGGT1Q9NYU2 1555 aa27.78■■■□□ 2.04
GCDH-214ENST00000591043 SUPT16HQ9Y5B9 1047 aaKnown RBP27.76■■■□□ 2.03
GCDH-214ENST00000591043 GGT6Q6P531 493 aa27.76■■■□□ 2.03
GCDH-214ENST00000591043 PPLO60437 1756 aa27.75■■■□□ 2.03
GCDH-214ENST00000591043 RPGRIP1LQ68CZ1 1315 aa27.74■■■□□ 2.03
GCDH-214ENST00000591043 REREQ9P2R6 1566 aa27.74■■■□□ 2.03
GCDH-214ENST00000591043 SETBP1Q9Y6X0 1596 aa27.74■■■□□ 2.03
GCDH-214ENST00000591043 CCDC184Q52MB2 194 aa27.74■■■□□ 2.03
GCDH-214ENST00000591043 NOS1P29475 1434 aa27.74■■■□□ 2.03
GCDH-214ENST00000591043 PIK3C2BO00750 1634 aa27.73■■■□□ 2.03
GCDH-214ENST00000591043 BRD4O60885 1362 aaPredicted RBP27.73■■■□□ 2.03
GCDH-214ENST00000591043 DISP3Q9P2K9 1392 aa27.73■■■□□ 2.03
GCDH-214ENST00000591043 MYBBP1AQ9BQG0 1328 aaKnown RBP27.72■■■□□ 2.03
GCDH-214ENST00000591043 NEFLP07196 543 aa27.71■■■□□ 2.03
GCDH-214ENST00000591043 ZBED9Q6R2W3 1325 aa27.71■■■□□ 2.03
GCDH-214ENST00000591043 FAM9BQ8IZU0 186 aa27.69■■■□□ 2.02
GCDH-214ENST00000591043 TSPOAP1O95153 1857 aa27.69■■■□□ 2.02
GCDH-214ENST00000591043 KDM4FA0A1W2PPD8 638 aa27.68■■■□□ 2.02
GCDH-214ENST00000591043 CFAP65Q6ZU64 1925 aaKnown RBP27.68■■■□□ 2.02
GCDH-214ENST00000591043 SYNMO15061 1565 aa27.68■■■□□ 2.02
GCDH-214ENST00000591043 MYO3AQ8NEV4 1616 aa27.68■■■□□ 2.02
GCDH-214ENST00000591043 PARD3Q8TEW0 1356 aa27.67■■■□□ 2.02
GCDH-214ENST00000591043 YEATS2Q9ULM3 1422 aa27.66■■■□□ 2.02
GCDH-214ENST00000591043 SIGLEC1Q9BZZ2 1709 aa27.66■■■□□ 2.02
GCDH-214ENST00000591043 KDM5AP29375 1690 aaKnown RBP27.64■■■□□ 2.02
GCDH-214ENST00000591043 AGLP35573 1532 aa27.64■■■□□ 2.02
GCDH-214ENST00000591043 PER1O15534 1290 aaPredicted RBP27.64■■■□□ 2.02
GCDH-214ENST00000591043 TMC1Q8TDI8 760 aa27.64■■■□□ 2.02
GCDH-214ENST00000591043 PPP6R1Q9UPN7 881 aa27.63■■■□□ 2.01
GCDH-214ENST00000591043 PIK3C2GO75747 1445 aa27.61■■■□□ 2.01
GCDH-214ENST00000591043 SBNO2Q9Y2G9 1366 aa27.61■■■□□ 2.01
GCDH-214ENST00000591043 ADGRF5Q8IZF2 1346 aa27.61■■■□□ 2.01
GCDH-214ENST00000591043 NLRP13Q86W25 1043 aa27.6■■■□□ 2.01
GCDH-214ENST00000591043 PREX1Q8TCU6 1659 aa27.59■■■□□ 2.01
GCDH-214ENST00000591043 SLC52A1Q9NWF4 448 aa27.58■■■□□ 2.01
GCDH-214ENST00000591043 PNISRQ8TF01 805 aaKnown RBP27.58■■■□□ 2
GCDH-214ENST00000591043 LRPPRCP42704 1394 aaKnown RBP27.56■■■□□ 2
GCDH-214ENST00000591043 CFAP70Q5T0N1 1121 aa27.56■■■□□ 2
GCDH-214ENST00000591043 PANK3Q9H999 370 aa27.56■■■□□ 2
GCDH-214ENST00000591043 INSRP06213 1382 aa27.55■■■□□ 2
GCDH-214ENST00000591043 CHGAP10645 457 aaKnown RBP27.55■■■□□ 2
GCDH-214ENST00000591043 MYOM1P52179 1685 aa27.54■■■□□ 2
GCDH-214ENST00000591043 ZFYVE9O95405 1425 aa27.54■■■□□ 2
GCDH-214ENST00000591043 FKBP8Q14318 412 aa27.53■■■□□ 2
GCDH-214ENST00000591043 C14orf93Q9H972 538 aaKnown RBP27.53■■■□□ 2
GCDH-214ENST00000591043 NEXMIFQ5QGS0 1516 aa27.53■■■□□ 2
GCDH-214ENST00000591043 VGFO15240 615 aaPredicted RBP27.52■■■□□ 2
GCDH-214ENST00000591043 NPC1L1Q9UHC9 1359 aa27.5■■□□□ 1.99
GCDH-214ENST00000591043 ADGRB1O14514 1584 aa27.5■■□□□ 1.99
GCDH-214ENST00000591043 ERICH6BQ5W0A0 696 aa27.48■■□□□ 1.99
GCDH-214ENST00000591043 ERVK-7P63135 1459 aa27.47■■□□□ 1.99
GCDH-214ENST00000591043 KNSTRNQ9Y448 316 aa27.47■■□□□ 1.99
GCDH-214ENST00000591043 ASXL1Q8IXJ9 1541 aa27.46■■□□□ 1.99
GCDH-214ENST00000591043 ARHGEF40Q8TER5 1519 aa27.46■■□□□ 1.99
GCDH-214ENST00000591043 CNGB1Q14028 1251 aaPredicted RBP27.46■■□□□ 1.99
GCDH-214ENST00000591043 TMEM131LA2VDJ0 1609 aa27.46■■□□□ 1.99
GCDH-214ENST00000591043 QRICH2Q9H0J4 1663 aa27.45■■□□□ 1.98
GCDH-214ENST00000591043 SMG6Q86US8 1419 aaKnown RBP27.44■■□□□ 1.98
GCDH-214ENST00000591043 CENPJQ9HC77 1338 aaPredicted RBP27.44■■□□□ 1.98
GCDH-214ENST00000591043 MYO5BQ9ULV0 1848 aa27.41■■□□□ 1.98
GCDH-214ENST00000591043 IDI1Q13907 227 aa27.4■■□□□ 1.98
GCDH-214ENST00000591043 CLTCQ00610 1675 aaKnown RBP27.39■■□□□ 1.97
GCDH-214ENST00000591043 CC2D1BQ5T0F9 858 aaKnown RBP27.38■■□□□ 1.97
GCDH-214ENST00000591043 PUS7Q96PZ0 661 aaKnown RBP27.38■■□□□ 1.97
GCDH-214ENST00000591043 ARHGEF28Q8N1W1 1705 aaKnown RBP27.37■■□□□ 1.97
GCDH-214ENST00000591043 SPATA31D1Q6ZQQ2 1576 aa27.36■■□□□ 1.97
GCDH-214ENST00000591043 AMER1Q5JTC6 1135 aaPredicted RBP27.35■■□□□ 1.97
GCDH-214ENST00000591043 NUDCQ9Y266 331 aa27.33■■□□□ 1.97
GCDH-214ENST00000591043 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
GCDH-214ENST00000591043 PDE3BQ13370 1112 aa27.3■■□□□ 1.96
GCDH-214ENST00000591043 TRAK1Q9UPV9 953 aa27.29■■□□□ 1.96
GCDH-214ENST00000591043 USP32Q8NFA0 1604 aa27.27■■□□□ 1.96
GCDH-214ENST00000591043 PPP2R1AP30153 589 aa27.25■■□□□ 1.95
GCDH-214ENST00000591043 ILDR1Q86SU0 546 aaPredicted RBP27.25■■□□□ 1.95
GCDH-214ENST00000591043 EVC2Q86UK5 1308 aa27.23■■□□□ 1.95
GCDH-214ENST00000591043 BCANQ96GW7 911 aa27.22■■□□□ 1.95
GCDH-214ENST00000591043 TMEM132EQ6IEE7 984 aa27.22■■□□□ 1.95
GCDH-214ENST00000591043 NINLQ9Y2I6 1382 aa27.21■■□□□ 1.95
GCDH-214ENST00000591043 FBXO31Q5XUX0 539 aaPredicted RBP27.2■■□□□ 1.94
GCDH-214ENST00000591043 STAG3Q9UJ98 1225 aa27.2■■□□□ 1.94
GCDH-214ENST00000591043 A2ML1A8K2U0 1454 aa27.18■■□□□ 1.94
GCDH-214ENST00000591043 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
GCDH-214ENST00000591043 ESF1Q9H501 851 aaKnown RBP27.18■■□□□ 1.94
GCDH-214ENST00000591043 RNF123Q5XPI4 1314 aa27.18■■□□□ 1.94
GCDH-214ENST00000591043 TULP4Q9NRJ4 1543 aa27.16■■□□□ 1.94
GCDH-214ENST00000591043 WDR43Q15061 677 aaKnown RBP eCLIP27.15■■□□□ 1.94
GCDH-214ENST00000591043 PPP4R2Q9NY27 417 aa27.15■■□□□ 1.94
GCDH-214ENST00000591043 YTHDC2Q9H6S0 1430 aaKnown RBP27.14■■□□□ 1.94
GCDH-214ENST00000591043 PTPRMP28827 1452 aa27.13■■□□□ 1.93
GCDH-214ENST00000591043 DLC1Q96QB1 1528 aa27.13■■□□□ 1.93
GCDH-214ENST00000591043 NUTM2DQ5VT03 806 aaPredicted RBP27.13■■□□□ 1.93
GCDH-214ENST00000591043 CARD14Q9BXL6 1004 aa27.12■■□□□ 1.93
GCDH-214ENST00000591043 NSD2O96028 1365 aa27.12■■□□□ 1.93
GCDH-214ENST00000591043 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.11■■□□□ 1.93
GCDH-214ENST00000591043 RIMS2Q9UQ26 1411 aa27.11■■□□□ 1.93
GCDH-214ENST00000591043 NSD3Q9BZ95 1437 aa27.1■■□□□ 1.93
GCDH-214ENST00000591043 ZMYM3Q14202 1370 aa27.1■■□□□ 1.93
GCDH-214ENST00000591043 ANKRD36BQ8N2N9 1353 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms