RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 NOS1P29475 1434 aa16.9■□□□□ 0.3
GFAP-217ENST00000590922 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
GFAP-217ENST00000590922 BCANQ96GW7 911 aa16.89■□□□□ 0.29
GFAP-217ENST00000590922 SLC52A1Q9NWF4 448 aa16.89■□□□□ 0.29
GFAP-217ENST00000590922 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
GFAP-217ENST00000590922 JCADQ9P266 1359 aa16.88■□□□□ 0.29
GFAP-217ENST00000590922 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
GFAP-217ENST00000590922 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
GFAP-217ENST00000590922 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
GFAP-217ENST00000590922 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
GFAP-217ENST00000590922 PLEKHG1Q9ULL1 1385 aa16.84■□□□□ 0.29
GFAP-217ENST00000590922 RPRD2Q5VT52 1461 aaKnown RBP16.84■□□□□ 0.29
GFAP-217ENST00000590922 ZFYVE9O95405 1425 aa16.83■□□□□ 0.28
GFAP-217ENST00000590922 COL16A1Q07092 1604 aaPredicted RBP16.82■□□□□ 0.28
GFAP-217ENST00000590922 PPP1R15AO75807 674 aaPredicted RBP16.82■□□□□ 0.28
GFAP-217ENST00000590922 HDGFP51858 240 aaKnown RBP16.82■□□□□ 0.28
GFAP-217ENST00000590922 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
GFAP-217ENST00000590922 GCC2Q8IWJ2 1684 aa16.81■□□□□ 0.28
GFAP-217ENST00000590922 RIMS2Q9UQ26 1411 aa16.8■□□□□ 0.28
GFAP-217ENST00000590922 ADGRL2O95490 1459 aa16.8■□□□□ 0.28
GFAP-217ENST00000590922 SPATA31A6Q5VVP1 1343 aa16.79■□□□□ 0.28
GFAP-217ENST00000590922 TMEM131LA2VDJ0 1609 aa16.79■□□□□ 0.28
GFAP-217ENST00000590922 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
GFAP-217ENST00000590922 C14orf37Q86TY3 774 aa16.78■□□□□ 0.28
GFAP-217ENST00000590922 LRP6O75581 1613 aa16.78■□□□□ 0.28
GFAP-217ENST00000590922 MEX3CQ5U5Q3 659 aaKnown RBP16.77■□□□□ 0.28
GFAP-217ENST00000590922 ANKRD50Q9ULJ7 1429 aa16.77■□□□□ 0.27
GFAP-217ENST00000590922 ZNF772Q68DY9 489 aaPredicted RBP16.76■□□□□ 0.27
GFAP-217ENST00000590922 CADPS2Q86UW7 1296 aa16.76■□□□□ 0.27
GFAP-217ENST00000590922 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
GFAP-217ENST00000590922 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.76■□□□□ 0.27
GFAP-217ENST00000590922 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
GFAP-217ENST00000590922 C19orf44Q9H6X5 657 aa16.75■□□□□ 0.27
GFAP-217ENST00000590922 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
GFAP-217ENST00000590922 DIP2AQ14689 1571 aa16.74■□□□□ 0.27
GFAP-217ENST00000590922 ATF3P18847 181 aa16.74■□□□□ 0.27
GFAP-217ENST00000590922 ADAMTS13Q76LX8 1427 aa16.73■□□□□ 0.27
GFAP-217ENST00000590922 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
GFAP-217ENST00000590922 ITGAEP38570 1179 aa16.73■□□□□ 0.27
GFAP-217ENST00000590922 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
GFAP-217ENST00000590922 PIK3R4Q99570 1358 aa16.73■□□□□ 0.27
GFAP-217ENST00000590922 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
GFAP-217ENST00000590922 NUTM2DQ5VT03 806 aaPredicted RBP16.7■□□□□ 0.26
GFAP-217ENST00000590922 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
GFAP-217ENST00000590922 E9PCH4 1651 aa16.69■□□□□ 0.26
GFAP-217ENST00000590922 UNC13BO14795 1591 aa16.69■□□□□ 0.26
GFAP-217ENST00000590922 RXRBP28702 533 aa16.69■□□□□ 0.26
GFAP-217ENST00000590922 TRPM2O94759 1503 aa16.69■□□□□ 0.26
GFAP-217ENST00000590922 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
GFAP-217ENST00000590922 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
GFAP-217ENST00000590922 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
GFAP-217ENST00000590922 NUTM2BA6NNL0 878 aaPredicted RBP16.66■□□□□ 0.26
GFAP-217ENST00000590922 NUTM2EB1AL46 878 aaPredicted RBP16.66■□□□□ 0.26
GFAP-217ENST00000590922 DCCP43146 1447 aa16.66■□□□□ 0.26
GFAP-217ENST00000590922 NUTM2AQ8IVF1 878 aaPredicted RBP16.66■□□□□ 0.26
GFAP-217ENST00000590922 PTPRUQ92729 1446 aa16.64■□□□□ 0.25
GFAP-217ENST00000590922 ROCK1Q13464 1354 aa16.64■□□□□ 0.25
GFAP-217ENST00000590922 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
GFAP-217ENST00000590922 ASXL1Q8IXJ9 1541 aa16.63■□□□□ 0.25
GFAP-217ENST00000590922 AFF2P51816 1311 aa16.63■□□□□ 0.25
GFAP-217ENST00000590922 SETD5Q9C0A6 1442 aa16.62■□□□□ 0.25
GFAP-217ENST00000590922 XRN1Q8IZH2 1706 aaKnown RBP16.62■□□□□ 0.25
GFAP-217ENST00000590922 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
GFAP-217ENST00000590922 LRRC59Q96AG4 307 aaKnown RBP16.6■□□□□ 0.25
GFAP-217ENST00000590922 MST1RQ04912 1400 aa16.6■□□□□ 0.25
GFAP-217ENST00000590922 NRXN3Q9Y4C0 1643 aa16.59■□□□□ 0.25
GFAP-217ENST00000590922 SETBP1Q9Y6X0 1596 aa16.59■□□□□ 0.25
GFAP-217ENST00000590922 NUP155O75694 1391 aa16.58■□□□□ 0.24
GFAP-217ENST00000590922 C8orf37Q96NL8 207 aa16.56■□□□□ 0.24
GFAP-217ENST00000590922 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
GFAP-217ENST00000590922 RGS12O14924 1447 aa16.55■□□□□ 0.24
GFAP-217ENST00000590922 METP08581 1390 aa16.55■□□□□ 0.24
GFAP-217ENST00000590922 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
GFAP-217ENST00000590922 ADGRL3Q9HAR2 1447 aa16.54■□□□□ 0.24
GFAP-217ENST00000590922 PNPLA6Q8IY17 1366 aa16.54■□□□□ 0.24
GFAP-217ENST00000590922 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
GFAP-217ENST00000590922 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
GFAP-217ENST00000590922 DDX17Q92841 729 aaKnown RBP16.53■□□□□ 0.24
GFAP-217ENST00000590922 NALCNQ8IZF0 1738 aa16.52■□□□□ 0.24
GFAP-217ENST00000590922 NAIPQ13075 1403 aa16.51■□□□□ 0.23
GFAP-217ENST00000590922 NGLY1Q96IV0 654 aa16.5■□□□□ 0.23
GFAP-217ENST00000590922 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
GFAP-217ENST00000590922 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
GFAP-217ENST00000590922 LAMC1P11047 1609 aa16.48■□□□□ 0.23
GFAP-217ENST00000590922 NEXMIFQ5QGS0 1516 aa16.47■□□□□ 0.23
GFAP-217ENST00000590922 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
GFAP-217ENST00000590922 HFM1A2PYH4 1435 aa16.46■□□□□ 0.23
GFAP-217ENST00000590922 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
GFAP-217ENST00000590922 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
GFAP-217ENST00000590922 USP21Q9UK80 565 aa16.44■□□□□ 0.22
GFAP-217ENST00000590922 KIF1BO60333 1816 aa16.44■□□□□ 0.22
GFAP-217ENST00000590922 PTCH1Q13635 1447 aa16.44■□□□□ 0.22
GFAP-217ENST00000590922 SOS2Q07890 1332 aaPredicted RBP16.44■□□□□ 0.22
GFAP-217ENST00000590922 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
GFAP-217ENST00000590922 ORAI2Q96SN7 254 aa16.42■□□□□ 0.22
GFAP-217ENST00000590922 FOXD1Q16676 465 aa16.41■□□□□ 0.22
GFAP-217ENST00000590922 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
GFAP-217ENST00000590922 ROBO2Q9HCK4 1378 aa16.4■□□□□ 0.22
GFAP-217ENST00000590922 COL22A1Q8NFW1 1626 aaPredicted RBP16.4■□□□□ 0.22
GFAP-217ENST00000590922 ATRNO75882 1429 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms