RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.73■■□□□ 1.55
RPRD1A-209ENST00000590898 EID1Q9Y6B2 187 aa24.72■■□□□ 1.55
RPRD1A-209ENST00000590898 ZFYVE9O95405 1425 aa24.71■■□□□ 1.55
RPRD1A-209ENST00000590898 RIMS2Q9UQ26 1411 aa24.71■■□□□ 1.55
RPRD1A-209ENST00000590898 STAC3Q96MF2 364 aa24.71■■□□□ 1.55
RPRD1A-209ENST00000590898 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.54
RPRD1A-209ENST00000590898 NEXMIFQ5QGS0 1516 aa24.68■■□□□ 1.54
RPRD1A-209ENST00000590898 LTKP29376 864 aa24.68■■□□□ 1.54
RPRD1A-209ENST00000590898 PPLO60437 1756 aa24.68■■□□□ 1.54
RPRD1A-209ENST00000590898 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
RPRD1A-209ENST00000590898 IFT172Q9UG01 1749 aa24.66■■□□□ 1.54
RPRD1A-209ENST00000590898 SCAF11Q99590 1463 aaKnown RBP24.66■■□□□ 1.54
RPRD1A-209ENST00000590898 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
RPRD1A-209ENST00000590898 TIMELESSQ9UNS1 1208 aa24.65■■□□□ 1.54
RPRD1A-209ENST00000590898 STRCQ7RTU9 1775 aa24.64■■□□□ 1.54
RPRD1A-209ENST00000590898 MED14O60244 1454 aa24.63■■□□□ 1.53
RPRD1A-209ENST00000590898 L3MBTL2Q969R5 705 aa24.63■■□□□ 1.53
RPRD1A-209ENST00000590898 PPP1R15AO75807 674 aaPredicted RBP24.62■■□□□ 1.53
RPRD1A-209ENST00000590898 DCAF11Q8TEB1 546 aa24.62■■□□□ 1.53
RPRD1A-209ENST00000590898 NCKAP5LQ9HCH0 1330 aa24.61■■□□□ 1.53
RPRD1A-209ENST00000590898 TONSLQ96HA7 1378 aa24.61■■□□□ 1.53
RPRD1A-209ENST00000590898 ZEB1P37275 1124 aaPredicted RBP24.61■■□□□ 1.53
RPRD1A-209ENST00000590898 NUTM2DQ5VT03 806 aaPredicted RBP24.59■■□□□ 1.53
RPRD1A-209ENST00000590898 PLEKHG1Q9ULL1 1385 aa24.59■■□□□ 1.53
RPRD1A-209ENST00000590898 MYOM2P54296 1465 aa24.59■■□□□ 1.53
RPRD1A-209ENST00000590898 DMRT2Q9Y5R5 561 aa24.59■■□□□ 1.53
RPRD1A-209ENST00000590898 KDM2AQ9Y2K7 1162 aa24.56■■□□□ 1.52
RPRD1A-209ENST00000590898 NPHP4O75161 1426 aaPredicted RBP24.56■■□□□ 1.52
RPRD1A-209ENST00000590898 ADGRF5Q8IZF2 1346 aa24.56■■□□□ 1.52
RPRD1A-209ENST00000590898 NRXN1Q9ULB1 1477 aa24.55■■□□□ 1.52
RPRD1A-209ENST00000590898 IQGAP1P46940 1657 aa24.54■■□□□ 1.52
RPRD1A-209ENST00000590898 SETBP1Q9Y6X0 1596 aa24.52■■□□□ 1.52
RPRD1A-209ENST00000590898 BCANQ96GW7 911 aa24.51■■□□□ 1.51
RPRD1A-209ENST00000590898 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
RPRD1A-209ENST00000590898 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
RPRD1A-209ENST00000590898 NRXN3Q9Y4C0 1643 aa24.48■■□□□ 1.51
RPRD1A-209ENST00000590898 ADAMTS13Q76LX8 1427 aa24.48■■□□□ 1.51
RPRD1A-209ENST00000590898 C14orf93Q9H972 538 aaKnown RBP24.47■■□□□ 1.51
RPRD1A-209ENST00000590898 DIP2AQ14689 1571 aa24.47■■□□□ 1.51
RPRD1A-209ENST00000590898 PRAG1Q86YV5 1406 aa24.46■■□□□ 1.51
RPRD1A-209ENST00000590898 SLC26A8Q96RN1 970 aa24.45■■□□□ 1.51
RPRD1A-209ENST00000590898 ALKQ9UM73 1620 aa24.45■■□□□ 1.5
RPRD1A-209ENST00000590898 LAMC1P11047 1609 aa24.44■■□□□ 1.5
RPRD1A-209ENST00000590898 KIAA1210Q9ULL0 1709 aa24.43■■□□□ 1.5
RPRD1A-209ENST00000590898 PIK3R4Q99570 1358 aa24.42■■□□□ 1.5
RPRD1A-209ENST00000590898 SETD1AO15047 1707 aaKnown RBP24.42■■□□□ 1.5
RPRD1A-209ENST00000590898 SENP3Q9H4L4 574 aaPredicted RBP24.41■■□□□ 1.5
RPRD1A-209ENST00000590898 CFAP70Q5T0N1 1121 aa24.41■■□□□ 1.5
RPRD1A-209ENST00000590898 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.5
RPRD1A-209ENST00000590898 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
RPRD1A-209ENST00000590898 METP08581 1390 aa24.36■■□□□ 1.49
RPRD1A-209ENST00000590898 TRPM1Q7Z4N2 1603 aa24.35■■□□□ 1.49
RPRD1A-209ENST00000590898 KCNA6P17658 529 aa24.33■■□□□ 1.49
RPRD1A-209ENST00000590898 TMEM132EQ6IEE7 984 aa24.32■■□□□ 1.48
RPRD1A-209ENST00000590898 ADGRB1O14514 1584 aa24.31■■□□□ 1.48
RPRD1A-209ENST00000590898 NBPF1Q3BBV0 1214 aa24.31■■□□□ 1.48
RPRD1A-209ENST00000590898 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
RPRD1A-209ENST00000590898 RALGAPBQ86X10 1494 aa24.3■■□□□ 1.48
RPRD1A-209ENST00000590898 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
RPRD1A-209ENST00000590898 PTPRUQ92729 1446 aa24.29■■□□□ 1.48
RPRD1A-209ENST00000590898 LRPPRCP42704 1394 aaKnown RBP24.28■■□□□ 1.48
RPRD1A-209ENST00000590898 ABCC11Q96J66 1382 aa24.28■■□□□ 1.48
RPRD1A-209ENST00000590898 NWD1Q149M9 1564 aa24.28■■□□□ 1.48
RPRD1A-209ENST00000590898 YTHDC2Q9H6S0 1430 aaKnown RBP24.28■■□□□ 1.48
RPRD1A-209ENST00000590898 GPRASP1Q5JY77 1395 aa24.28■■□□□ 1.48
RPRD1A-209ENST00000590898 ROCK2O75116 1388 aaKnown RBP24.27■■□□□ 1.48
RPRD1A-209ENST00000590898 ZNF335Q9H4Z2 1342 aaPredicted RBP24.27■■□□□ 1.48
RPRD1A-209ENST00000590898 STRCP1A6NGW2 1772 aa24.26■■□□□ 1.47
RPRD1A-209ENST00000590898 XRN1Q8IZH2 1706 aaKnown RBP24.26■■□□□ 1.47
RPRD1A-209ENST00000590898 SIRT1Q96EB6 747 aa24.25■■□□□ 1.47
RPRD1A-209ENST00000590898 TECPR2O15040 1411 aa24.24■■□□□ 1.47
RPRD1A-209ENST00000590898 KNDC1Q76NI1 1749 aa24.24■■□□□ 1.47
RPRD1A-209ENST00000590898 NKTRP30414 1462 aaKnown RBP24.24■■□□□ 1.47
RPRD1A-209ENST00000590898 STK26Q9P289 416 aa24.23■■□□□ 1.47
RPRD1A-209ENST00000590898 CPS1P31327 1500 aa24.22■■□□□ 1.47
RPRD1A-209ENST00000590898 CARD11Q9BXL7 1154 aa24.22■■□□□ 1.47
RPRD1A-209ENST00000590898 PTCH1Q13635 1447 aa24.21■■□□□ 1.47
RPRD1A-209ENST00000590898 LTBP4Q8N2S1 1624 aa24.2■■□□□ 1.46
RPRD1A-209ENST00000590898 DLC1Q96QB1 1528 aa24.2■■□□□ 1.46
RPRD1A-209ENST00000590898 TRAK1Q9UPV9 953 aa24.19■■□□□ 1.46
RPRD1A-209ENST00000590898 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
RPRD1A-209ENST00000590898 PROSER2Q86WR7 435 aaPredicted RBP24.18■■□□□ 1.46
RPRD1A-209ENST00000590898 ROBO2Q9HCK4 1378 aa24.17■■□□□ 1.46
RPRD1A-209ENST00000590898 NCOA3Q9Y6Q9 1424 aa24.16■■□□□ 1.46
RPRD1A-209ENST00000590898 ARHGEF28Q8N1W1 1705 aaKnown RBP24.14■■□□□ 1.46
RPRD1A-209ENST00000590898 LRRC7Q96NW7 1537 aa24.14■■□□□ 1.45
RPRD1A-209ENST00000590898 EIF3AQ14152 1382 aaKnown RBP24.12■■□□□ 1.45
RPRD1A-209ENST00000590898 WAPLQ7Z5K2 1190 aa24.12■■□□□ 1.45
RPRD1A-209ENST00000590898 PRAM1Q96QH2 718 aa24.12■■□□□ 1.45
RPRD1A-209ENST00000590898 POGKQ9P215 609 aa24.12■■□□□ 1.45
RPRD1A-209ENST00000590898 TMEM94Q12767 1356 aa24.11■■□□□ 1.45
RPRD1A-209ENST00000590898 XIRP1Q702N8 1843 aaKnown RBP24.1■■□□□ 1.45
RPRD1A-209ENST00000590898 CENPJQ9HC77 1338 aaPredicted RBP24.08■■□□□ 1.45
RPRD1A-209ENST00000590898 USP47Q96K76 1375 aa24.07■■□□□ 1.44
RPRD1A-209ENST00000590898 PLEKHH1Q9ULM0 1364 aa24.07■■□□□ 1.44
RPRD1A-209ENST00000590898 C19orf44Q9H6X5 657 aa24.06■■□□□ 1.44
RPRD1A-209ENST00000590898 RBM33Q96EV2 1170 aaKnown RBP24.05■■□□□ 1.44
RPRD1A-209ENST00000590898 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.443e-10■■■■■ 43
RPRD1A-209ENST00000590898 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.04■■□□□ 1.44
RPRD1A-209ENST00000590898 IQSEC2Q5JU85 1478 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms