RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 ADGRB3O60242 1522 aa24.62■■□□□ 1.53
GCDH-213ENST00000590627 SLC52A1Q9NWF4 448 aa24.62■■□□□ 1.53
GCDH-213ENST00000590627 XIRP1Q702N8 1843 aaKnown RBP24.62■■□□□ 1.53
GCDH-213ENST00000590627 TET3O43151 1660 aa24.59■■□□□ 1.53
GCDH-213ENST00000590627 KCNA6P17658 529 aa24.55■■□□□ 1.52
GCDH-213ENST00000590627 TMEM94Q12767 1356 aa24.53■■□□□ 1.52
GCDH-213ENST00000590627 UNC13BO14795 1591 aa24.52■■□□□ 1.52
GCDH-213ENST00000590627 SLC26A8Q96RN1 970 aa24.52■■□□□ 1.52
GCDH-213ENST00000590627 PHF23Q9BUL5 403 aaPredicted RBP24.51■■□□□ 1.51
GCDH-213ENST00000590627 FAM135BQ49AJ0 1406 aa24.51■■□□□ 1.51
GCDH-213ENST00000590627 NWD1Q149M9 1564 aa24.5■■□□□ 1.51
GCDH-213ENST00000590627 NKTRP30414 1462 aaKnown RBP24.5■■□□□ 1.51
GCDH-213ENST00000590627 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
GCDH-213ENST00000590627 ZFYVE9O95405 1425 aa24.49■■□□□ 1.51
GCDH-213ENST00000590627 TRIM52Q96A61 297 aa24.48■■□□□ 1.51
GCDH-213ENST00000590627 NUP155O75694 1391 aa24.47■■□□□ 1.51
GCDH-213ENST00000590627 HDGFP51858 240 aaKnown RBP24.47■■□□□ 1.51
GCDH-213ENST00000590627 PROSER2Q86WR7 435 aaPredicted RBP24.47■■□□□ 1.51
GCDH-213ENST00000590627 MYO5BQ9ULV0 1848 aa24.47■■□□□ 1.51
GCDH-213ENST00000590627 TMEM131LA2VDJ0 1609 aa24.46■■□□□ 1.51
GCDH-213ENST00000590627 PLEKHG1Q9ULL1 1385 aa24.46■■□□□ 1.51
GCDH-213ENST00000590627 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
GCDH-213ENST00000590627 BCANQ96GW7 911 aa24.44■■□□□ 1.5
GCDH-213ENST00000590627 E9PCH4 1651 aa24.43■■□□□ 1.5
GCDH-213ENST00000590627 IQGAP3Q86VI3 1631 aa24.43■■□□□ 1.5
GCDH-213ENST00000590627 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
GCDH-213ENST00000590627 DHX57Q6P158 1386 aaKnown RBP24.42■■□□□ 1.5
GCDH-213ENST00000590627 PPP1R15AO75807 674 aaPredicted RBP24.41■■□□□ 1.5
GCDH-213ENST00000590627 MPHOSPH9Q99550 1183 aa24.41■■□□□ 1.5
GCDH-213ENST00000590627 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.4■■□□□ 1.5
GCDH-213ENST00000590627 MSH6P52701 1360 aa24.4■■□□□ 1.5
GCDH-213ENST00000590627 ROBO1Q9Y6N7 1651 aa24.4■■□□□ 1.5
GCDH-213ENST00000590627 RBM33Q96EV2 1170 aaKnown RBP24.38■■□□□ 1.49
GCDH-213ENST00000590627 TBX22Q9Y458 520 aa24.38■■□□□ 1.49
GCDH-213ENST00000590627 SLC4A1APQ9BWU0 796 aaKnown RBP24.37■■□□□ 1.49
GCDH-213ENST00000590627 CHGAP10645 457 aaKnown RBP24.35■■□□□ 1.49
GCDH-213ENST00000590627 NCOA3Q9Y6Q9 1424 aa24.35■■□□□ 1.49
GCDH-213ENST00000590627 DIP2AQ14689 1571 aa24.34■■□□□ 1.49
GCDH-213ENST00000590627 PIK3R4Q99570 1358 aa24.32■■□□□ 1.48
GCDH-213ENST00000590627 ADAMTS13Q76LX8 1427 aa24.32■■□□□ 1.48
GCDH-213ENST00000590627 SLAIN2Q9P270 581 aa24.31■■□□□ 1.48
GCDH-213ENST00000590627 RGS17Q9UGC6 210 aaPredicted RBP24.31■■□□□ 1.48
GCDH-213ENST00000590627 CLSPNQ9HAW4 1339 aa24.29■■□□□ 1.48
GCDH-213ENST00000590627 CCER1Q8TC90 406 aaPredicted RBP24.28■■□□□ 1.48
GCDH-213ENST00000590627 NUTM2DQ5VT03 806 aaPredicted RBP24.26■■□□□ 1.47
GCDH-213ENST00000590627 PHLPP1O60346 1717 aa24.25■■□□□ 1.47
GCDH-213ENST00000590627 TRPM2O94759 1503 aa24.25■■□□□ 1.47
GCDH-213ENST00000590627 SPHKAPQ2M3C7 1700 aa24.24■■□□□ 1.47
GCDH-213ENST00000590627 ANKRD30BQ9BXX2 1392 aa24.22■■□□□ 1.47
GCDH-213ENST00000590627 JCADQ9P266 1359 aa24.21■■□□□ 1.47
GCDH-213ENST00000590627 FOXD1Q16676 465 aa24.21■■□□□ 1.47
GCDH-213ENST00000590627 C14orf37Q86TY3 774 aa24.21■■□□□ 1.47
GCDH-213ENST00000590627 CADPS2Q86UW7 1296 aa24.21■■□□□ 1.47
GCDH-213ENST00000590627 C19orf44Q9H6X5 657 aa24.21■■□□□ 1.47
GCDH-213ENST00000590627 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.21■■□□□ 1.47
GCDH-213ENST00000590627 COL16A1Q07092 1604 aaPredicted RBP24.19■■□□□ 1.46
GCDH-213ENST00000590627 SETBP1Q9Y6X0 1596 aa24.18■■□□□ 1.46
GCDH-213ENST00000590627 AMOTL2Q9Y2J4 779 aa24.18■■□□□ 1.46
GCDH-213ENST00000590627 ATF3P18847 181 aa24.17■■□□□ 1.46
GCDH-213ENST00000590627 PTPRUQ92729 1446 aa24.17■■□□□ 1.46
GCDH-213ENST00000590627 NRXN3Q9Y4C0 1643 aa24.16■■□□□ 1.46
GCDH-213ENST00000590627 POTEAQ6S8J7 498 aa24.15■■□□□ 1.46
GCDH-213ENST00000590627 AHDC1Q5TGY3 1603 aaPredicted RBP24.14■■□□□ 1.46
GCDH-213ENST00000590627 DCCP43146 1447 aa24.14■■□□□ 1.45
GCDH-213ENST00000590627 XRN1Q8IZH2 1706 aaKnown RBP24.14■■□□□ 1.45
GCDH-213ENST00000590627 ZNF326Q5BKZ1 582 aaKnown RBP24.13■■□□□ 1.45
GCDH-213ENST00000590627 SPATA31A6Q5VVP1 1343 aa24.1■■□□□ 1.45
GCDH-213ENST00000590627 CLTCL1P53675 1640 aa24.1■■□□□ 1.45
GCDH-213ENST00000590627 NEXMIFQ5QGS0 1516 aa24.08■■□□□ 1.45
GCDH-213ENST00000590627 SHPRHQ149N8 1683 aa24.08■■□□□ 1.44
GCDH-213ENST00000590627 KIF1BO60333 1816 aa24.07■■□□□ 1.44
GCDH-213ENST00000590627 METP08581 1390 aa24.06■■□□□ 1.44
GCDH-213ENST00000590627 BRINP3Q76B58 766 aa24.06■■□□□ 1.44
GCDH-213ENST00000590627 SIN3AQ96ST3 1273 aa24.06■■□□□ 1.44
GCDH-213ENST00000590627 CCDC144AA2RUR9 1427 aa24.06■■□□□ 1.44
GCDH-213ENST00000590627 LRP6O75581 1613 aa24.04■■□□□ 1.44
GCDH-213ENST00000590627 MST1RQ04912 1400 aa24.02■■□□□ 1.44
GCDH-213ENST00000590627 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
GCDH-213ENST00000590627 ADGRL3Q9HAR2 1447 aa24.01■■□□□ 1.43
GCDH-213ENST00000590627 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
GCDH-213ENST00000590627 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
GCDH-213ENST00000590627 NHSL1Q5SYE7 1610 aa23.99■■□□□ 1.43
GCDH-213ENST00000590627 ZNF772Q68DY9 489 aaPredicted RBP23.98■■□□□ 1.43
GCDH-213ENST00000590627 TIMELESSQ9UNS1 1208 aa23.98■■□□□ 1.43
GCDH-213ENST00000590627 VGFO15240 615 aaPredicted RBP23.97■■□□□ 1.43
GCDH-213ENST00000590627 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
GCDH-213ENST00000590627 RPGRIP1LQ68CZ1 1315 aa23.95■■□□□ 1.42
GCDH-213ENST00000590627 PTCH1Q13635 1447 aa23.94■■□□□ 1.42
GCDH-213ENST00000590627 SPATA31E1Q6ZUB1 1445 aa23.94■■□□□ 1.42
GCDH-213ENST00000590627 SETD1AO15047 1707 aaKnown RBP23.94■■□□□ 1.42
GCDH-213ENST00000590627 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
GCDH-213ENST00000590627 PRAG1Q86YV5 1406 aa23.93■■□□□ 1.42
GCDH-213ENST00000590627 LRRC59Q96AG4 307 aaKnown RBP23.92■■□□□ 1.42
GCDH-213ENST00000590627 TONSLQ96HA7 1378 aa23.9■■□□□ 1.42
GCDH-213ENST00000590627 PPLO60437 1756 aa23.89■■□□□ 1.42
GCDH-213ENST00000590627 NUTM2BA6NNL0 878 aaPredicted RBP23.88■■□□□ 1.41
GCDH-213ENST00000590627 NUTM2EB1AL46 878 aaPredicted RBP23.88■■□□□ 1.41
GCDH-213ENST00000590627 NUTM2AQ8IVF1 878 aaPredicted RBP23.88■■□□□ 1.41
GCDH-213ENST00000590627 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
GCDH-213ENST00000590627 ROBO2Q9HCK4 1378 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms