RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 NEXMIFQ5QGS0 1516 aa23.97■■□□□ 1.43
GCDH-212ENST00000590530 TRPM1Q7Z4N2 1603 aa23.97■■□□□ 1.43
GCDH-212ENST00000590530 MYOM2P54296 1465 aa23.96■■□□□ 1.43
GCDH-212ENST00000590530 CARD11Q9BXL7 1154 aa23.96■■□□□ 1.43
GCDH-212ENST00000590530 RPGRIP1LQ68CZ1 1315 aa23.96■■□□□ 1.43
GCDH-212ENST00000590530 ROCK2O75116 1388 aaKnown RBP23.96■■□□□ 1.43
GCDH-212ENST00000590530 CFAP70Q5T0N1 1121 aa23.95■■□□□ 1.42
GCDH-212ENST00000590530 PPLO60437 1756 aa23.95■■□□□ 1.42
GCDH-212ENST00000590530 EIF4G2P78344 907 aaKnown RBP eCLIP23.94■■□□□ 1.42
GCDH-212ENST00000590530 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
GCDH-212ENST00000590530 STAC3Q96MF2 364 aa23.94■■□□□ 1.42
GCDH-212ENST00000590530 USP47Q96K76 1375 aa23.9■■□□□ 1.42
GCDH-212ENST00000590530 PIK3C2GO75747 1445 aa23.89■■□□□ 1.42
GCDH-212ENST00000590530 GPRASP1Q5JY77 1395 aa23.89■■□□□ 1.42
GCDH-212ENST00000590530 VGFO15240 615 aaPredicted RBP23.88■■□□□ 1.41
GCDH-212ENST00000590530 RIMS2Q9UQ26 1411 aa23.87■■□□□ 1.41
GCDH-212ENST00000590530 NLRP1Q9C000 1473 aa23.87■■□□□ 1.41
GCDH-212ENST00000590530 C11orf95C9JLR9 678 aaPredicted RBP23.86■■□□□ 1.41
GCDH-212ENST00000590530 PTPRMP28827 1452 aa23.86■■□□□ 1.41
GCDH-212ENST00000590530 UBR1Q8IWV7 1749 aa23.85■■□□□ 1.41
GCDH-212ENST00000590530 ZFYVE9O95405 1425 aa23.85■■□□□ 1.41
GCDH-212ENST00000590530 C14orf93Q9H972 538 aaKnown RBP23.85■■□□□ 1.41
GCDH-212ENST00000590530 ST20-MTHFSA0A0A6YYL1 179 aa23.83■■□□□ 1.41
GCDH-212ENST00000590530 TMEM132EQ6IEE7 984 aa23.83■■□□□ 1.41
GCDH-212ENST00000590530 KDM4FA0A1W2PPD8 638 aa23.83■■□□□ 1.4
GCDH-212ENST00000590530 MYO3AQ8NEV4 1616 aa23.82■■□□□ 1.4
GCDH-212ENST00000590530 TMEM2Q9UHN6 1383 aa23.82■■□□□ 1.4
GCDH-212ENST00000590530 LAMC1P11047 1609 aa23.8■■□□□ 1.4
GCDH-212ENST00000590530 LTKP29376 864 aa23.8■■□□□ 1.4
GCDH-212ENST00000590530 POLR1AO95602 1720 aaPredicted RBP23.79■■□□□ 1.4
GCDH-212ENST00000590530 KIAA1210Q9ULL0 1709 aa23.77■■□□□ 1.4
GCDH-212ENST00000590530 WASHC2AQ641Q2 1341 aa23.77■■□□□ 1.4
GCDH-212ENST00000590530 ADGRB1O14514 1584 aa23.76■■□□□ 1.39
GCDH-212ENST00000590530 KDM5AP29375 1690 aaKnown RBP23.76■■□□□ 1.39
GCDH-212ENST00000590530 CEP170BQ9Y4F5 1589 aaPredicted RBP23.75■■□□□ 1.39
GCDH-212ENST00000590530 TXNDC2Q86VQ3 553 aa23.74■■□□□ 1.39
GCDH-212ENST00000590530 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.74■■□□□ 1.39
GCDH-212ENST00000590530 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
GCDH-212ENST00000590530 ASXL1Q8IXJ9 1541 aa23.73■■□□□ 1.39
GCDH-212ENST00000590530 DDX10Q13206 875 aaKnown RBP23.73■■□□□ 1.39
GCDH-212ENST00000590530 MIER1Q8N108 512 aa23.73■■□□□ 1.39
GCDH-212ENST00000590530 THEMISQ8N1K5 641 aaPredicted RBP23.73■■□□□ 1.39
GCDH-212ENST00000590530 TESK2Q96S53 571 aa23.72■■□□□ 1.39
GCDH-212ENST00000590530 TRAK1Q9UPV9 953 aa23.72■■□□□ 1.39
GCDH-212ENST00000590530 IQGAP1P46940 1657 aa23.71■■□□□ 1.39
GCDH-212ENST00000590530 ARHGAP23Q9P227 1491 aa23.71■■□□□ 1.39
GCDH-212ENST00000590530 ALKQ9UM73 1620 aa23.71■■□□□ 1.39
GCDH-212ENST00000590530 SLIT1O75093 1534 aa23.7■■□□□ 1.38
GCDH-212ENST00000590530 KIF7Q2M1P5 1343 aa23.7■■□□□ 1.38
GCDH-212ENST00000590530 SETBP1Q9Y6X0 1596 aa23.7■■□□□ 1.38
GCDH-212ENST00000590530 NRXN3Q9Y4C0 1643 aa23.69■■□□□ 1.38
GCDH-212ENST00000590530 STK26Q9P289 416 aa23.68■■□□□ 1.38
GCDH-212ENST00000590530 HDGFP51858 240 aaKnown RBP23.68■■□□□ 1.38
GCDH-212ENST00000590530 BCANQ96GW7 911 aa23.68■■□□□ 1.38
GCDH-212ENST00000590530 CCDC7Q96M83 1385 aa23.68■■□□□ 1.38
GCDH-212ENST00000590530 METP08581 1390 aa23.66■■□□□ 1.38
GCDH-212ENST00000590530 EID1Q9Y6B2 187 aa23.66■■□□□ 1.38
GCDH-212ENST00000590530 SETD1BQ9UPS6 1966 aaKnown RBP23.65■■□□□ 1.38
GCDH-212ENST00000590530 ZNF142P52746 1687 aaPredicted RBP23.64■■□□□ 1.38
GCDH-212ENST00000590530 POLR3GLQ9BT43 218 aa23.64■■□□□ 1.38
GCDH-212ENST00000590530 ADAMTS13Q76LX8 1427 aa23.64■■□□□ 1.38
GCDH-212ENST00000590530 DISP3Q9P2K9 1392 aa23.64■■□□□ 1.37
GCDH-212ENST00000590530 PLEKHG1Q9ULL1 1385 aa23.64■■□□□ 1.37
GCDH-212ENST00000590530 SLC26A8Q96RN1 970 aa23.64■■□□□ 1.37
GCDH-212ENST00000590530 SETD1AO15047 1707 aaKnown RBP23.62■■□□□ 1.37
GCDH-212ENST00000590530 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
GCDH-212ENST00000590530 EIF3AQ14152 1382 aaKnown RBP23.59■■□□□ 1.37
GCDH-212ENST00000590530 SAFB2Q14151 953 aaKnown RBP eCLIP23.58■■□□□ 1.37
GCDH-212ENST00000590530 CENPJQ9HC77 1338 aaPredicted RBP23.58■■□□□ 1.36
GCDH-212ENST00000590530 MED14O60244 1454 aa23.56■■□□□ 1.36
GCDH-212ENST00000590530 ANKLE2Q86XL3 938 aa23.56■■□□□ 1.36
GCDH-212ENST00000590530 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
GCDH-212ENST00000590530 NCKAP5LQ9HCH0 1330 aa23.54■■□□□ 1.36
GCDH-212ENST00000590530 HSPA2P54652 639 aa23.54■■□□□ 1.36
GCDH-212ENST00000590530 PRAM1Q96QH2 718 aa23.54■■□□□ 1.36
GCDH-212ENST00000590530 ARHGEF28Q8N1W1 1705 aaKnown RBP23.54■■□□□ 1.36
GCDH-212ENST00000590530 TMF1P82094 1093 aa23.53■■□□□ 1.36
GCDH-212ENST00000590530 WAPLQ7Z5K2 1190 aa23.53■■□□□ 1.36
GCDH-212ENST00000590530 PLEKHH1Q9ULM0 1364 aa23.53■■□□□ 1.36
GCDH-212ENST00000590530 PTPRUQ92729 1446 aa23.52■■□□□ 1.36
GCDH-212ENST00000590530 TBX22Q9Y458 520 aa23.5■■□□□ 1.35
GCDH-212ENST00000590530 ABCC11Q96J66 1382 aa23.5■■□□□ 1.35
GCDH-212ENST00000590530 POGKQ9P215 609 aa23.48■■□□□ 1.35
GCDH-212ENST00000590530 QRICH2Q9H0J4 1663 aa23.48■■□□□ 1.35
GCDH-212ENST00000590530 MINK1Q8N4C8 1332 aaPredicted RBP23.46■■□□□ 1.35
GCDH-212ENST00000590530 ROBO2Q9HCK4 1378 aa23.46■■□□□ 1.35
GCDH-212ENST00000590530 SBNO2Q9Y2G9 1366 aa23.46■■□□□ 1.35
GCDH-212ENST00000590530 ANP32CO43423 234 aa23.45■■□□□ 1.35
GCDH-212ENST00000590530 LMTK3Q96Q04 1460 aa23.45■■□□□ 1.35
GCDH-212ENST00000590530 AMOTL2Q9Y2J4 779 aa23.45■■□□□ 1.34
GCDH-212ENST00000590530 NPHP4O75161 1426 aaPredicted RBP23.44■■□□□ 1.34
GCDH-212ENST00000590530 DLC1Q96QB1 1528 aa23.43■■□□□ 1.34
GCDH-212ENST00000590530 TECPR2O15040 1411 aa23.42■■□□□ 1.34
GCDH-212ENST00000590530 TULP4Q9NRJ4 1543 aa23.42■■□□□ 1.34
GCDH-212ENST00000590530 CABP2Q9NPB3 220 aa23.4■■□□□ 1.34
GCDH-212ENST00000590530 DIP2AQ14689 1571 aa23.4■■□□□ 1.34
GCDH-212ENST00000590530 CCER2I3L3R5 266 aa23.39■■□□□ 1.34
GCDH-212ENST00000590530 KCNA6P17658 529 aa23.39■■□□□ 1.33
GCDH-212ENST00000590530 CPS1P31327 1500 aa23.38■■□□□ 1.33
GCDH-212ENST00000590530 SIRT1Q96EB6 747 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms